prot_P-littoralis_Contig144.93.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig144.93.1
Unique Nameprot_P-littoralis_Contig144.93.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length71
Homology
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BLAST of mRNA_P-littoralis_Contig144.93.1 vs. uniprot
Match: A0A6H5J7P3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P3_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 6.510e-16
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    7 DNVSYVLARTIRSNLHQEAAKLIGCAGMGNQRKRGQCFARAMQMFPRKRMDRIPTEVVLALLRH 70
            DNVSYVLART+R  L   AA+ IG +G GNQ +RG CFARAM MF  K M+ IP +VVLALLR+
Sbjct:  160 DNVSYVLARTVRRILQYLAAQEIGASGQGNQCRRGDCFARAMGMFFGKGMEGIPRDVVLALLRY 223
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BLAST of mRNA_P-littoralis_Contig144.93.1 vs. uniprot
Match: D8LNQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNQ5_ECTSI)

HSP 1 Score: 48.1 bits (113), Expect = 6.500e-5
Identity = 24/40 (60.00%), Postives = 28/40 (70.00%), Query Frame = 0 
Query:    7 DNVSYVLARTIRSNLHQEAAKLIGCAGMGNQRKRGQCFAR 46
            DNV YVLART+RSNL   AA+ IG  G GNQ +RG   +R
Sbjct:  127 DNVPYVLARTVRSNLQYLAAQEIGATGQGNQCRRGMFCSR 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.93.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7P3_9PHAE6.510e-1664.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LNQ5_ECTSI6.500e-560.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig144contigP-littoralis_Contig144:260671..260883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig144.93.1mRNA_P-littoralis_Contig144.93.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig144 260671..261361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig144.93.1 ID=prot_P-littoralis_Contig144.93.1|Name=mRNA_P-littoralis_Contig144.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=71bp
GEGGKYDNVSYVLARTIRSNLHQEAAKLIGCAGMGNQRKRGQCFARAMQM
FPRKRMDRIPTEVVLALLRH*
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