prot_P-littoralis_Contig144.48.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig144.48.1
Unique Nameprot_P-littoralis_Contig144.48.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length174
Homology
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 1.090e-91
Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLPK 174
            IR+VVDSGKVKVRSFQ STGMEFLRS+DVSK QATQRAGRAGREAPGVC+RL+REDSYLELGDAP PEILRVNLAQVVLQLKVMGI+DP+TFDYVTAPSRAALLKAL TLAMLGALD S  VT DG+KMAALPLDPAFA LL RSAEPRFSCVKEVLTT ACLSAENLLFY PK
Sbjct:  691 IRYVVDSGKVKVRSFQASTGMEFLRSQDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPIPEILRVNLAQVVLQLKVMGIDDPSTFDYVTAPSRAALLKALKTLAMLGALDKSARVTPDGRKMAALPLDPAFAHLLVRSAEPRFSCVKEVLTTVACLSAENLLFYPPK 864          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S2UR69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR69_9STRA)

HSP 1 Score: 174 bits (441), Expect = 7.160e-50
Identity = 98/173 (56.65%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 173
            I+FVVD GK K R F  +TGME L   ++SK QA QR+GRAGR + GVC RLY ED +  L D   PEILRVNLA VVLQLK MG+ DP +FD++T P   +LLKA   L  L A+D    +T  GKKMA LPLDP FA LL +S  P+F C  E+LT  A LSAEN+ FY P
Sbjct:  172 IKFVVDCGKQKTRDFSGTTGMESLTVANISKAQAAQRSGRAGRVSSGVCFRLYTEDGFDSLDDTTVPEILRVNLAHVVLQLKGMGVHDPRSFDFLTPPDVKSLLKAFELLYALQAIDADMNLTLYGKKMAKLPLDPVFANLLLQS--PKFGCTAEMLTGVAMLSAENI-FYRP 341          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S2UPS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPS3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 1.460e-48
Identity = 98/173 (56.65%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 173
            I+FVVD GK K R F  +TGME L   ++SK QA QR+GRAGR + GVC RLY ED +  L D   PEILRVNLA VVLQLK MG+ DP +FD++T P   +LLKA   L  L A+D    +T  GKKMA LPLDP FA LL +S  P+F C  E+LT  A LSAEN+ FY P
Sbjct:  172 IKFVVDCGKQKTRDFSGTTGMESLTVANISKAQAAQRSGRAGRVSSGVCFRLYTEDGFDSLDDTTVPEILRVNLAHVVLQLKGMGVHDPRSFDFLTPPDVKSLLKAFELLYALQAIDADMNLTLYGKKMAKLPLDPVFANLLLQS--PKFGCTAEMLTGVAMLSAENI-FYRP 341          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA)

HSP 1 Score: 175 bits (443), Expect = 4.980e-48
Identity = 91/170 (53.53%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 170
            +R+V+D G VK RS     GME L+   VSK QA QRAGRAGREAPG C+R+Y E ++L L  +  PEI RV+L+QVVLQLKV+GI+    FD+V+ PS  AL+ AL +L +LG LD +G +T  G+++A LPL P F+ LL  SAEP F C  EVL   +CLSA+N+ F
Sbjct:  343 VRYVIDCGLVKQRSVVAGAGMEALKVVPVSKSQAQQRAGRAGREAPGACYRIYTESTFLALAQSTPPEIERVDLSQVVLQLKVIGIDKVDQFDFVSPPSPTALIAALESLYLLGTLDAAGDLTPHGRRIAQLPLAPTFSHLLLASAEPAFECTAEVLAAVSCLSADNVFF 512          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S4JCP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCP6_9STRA)

HSP 1 Score: 175 bits (443), Expect = 5.290e-48
Identity = 101/173 (58.38%), Postives = 114/173 (65.90%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 173
            IRFVVDSGKVK R +  STGME L   DVSK QA+QR GRAGR A G C RLY E  +  L D   PEILRVNL  VVLQLK MG+ DP  FD++T PS  ALL A   L  LGA+D    +T  GK +A LPLDP FA LL RSAE  F C  E+LT  + LSA+N+ FY P
Sbjct:  366 IRFVVDSGKVKRRDYAGSTGMESLTVSDVSKAQASQRTGRAGRVAAGYCFRLYPEVGFDRLEDVAPPEILRVNLGHVVLQLKCMGVHDPRNFDFLTPPSPEALLAAFELLYALGAVDGEMNLTPKGKNLAKLPLDPIFANLLLRSAE--FECTNEMLTAVSMLSADNV-FYRP 535          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: B8C4C7_THAPS (Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4C7_THAPS)

HSP 1 Score: 171 bits (434), Expect = 8.440e-47
Identity = 95/173 (54.91%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 173
            I++VVD GK K R +  STGME L+  D+SK QA QR GRAGR + GVC RLY E ++  L D   PEILRVNLA VVLQLK MG+ DP +F ++T PS   ++K+   L  LGA+D S  +T  GK+M+ LPLDP FA LL +S  P+F CV EVLT    LSAEN+ FY P
Sbjct:  328 IKYVVDCGKHKSREYSSSTGMESLKVSDISKAQAAQRMGRAGRVSEGVCLRLYPEIAFDSLADTTVPEILRVNLASVVLQLKGMGVHDPRSFSFLTPPSPENIVKSFELLTTLGAIDKSMNLTMYGKEMSKLPLDPVFAHLLLQS--PKFECVSEVLTVVGMLSAENI-FYRP 497          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A1E7FH80_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH80_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.300e-46
Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 170
            IR+VVD GK K+R F  STGME L  +D+SK QA QR GRAGR + G+C RLY ED++  + +   PEI RVNLAQV+L LK MG+ DP  FDY+T PS A++ +A   L  LGAL  +  ++  GKKMA LP+DP +A LL +S  P++ C  E+LT  A LSAEN+LF
Sbjct:  426 IRYVVDCGKHKIRDFSNSTGMESLTVQDISKAQAAQRMGRAGRVSAGICFRLYTEDAFDSMAETAVPEISRVNLAQVILMLKGMGVFDPLQFDYLTKPSAASIRRACQNLFALGALTENMELSNHGKKMARLPVDPIYAHLLLQS--PKYGCTHEMLTAVAMLSAENVLF 593          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S4ACM8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACM8_9STRA)

HSP 1 Score: 168 bits (425), Expect = 4.130e-45
Identity = 89/170 (52.35%), Postives = 118/170 (69.41%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 170
            IR+VVD GK K R F  +TGME L  +D+S+ QA QR+GRAGR + G+C RLY ED++  L +A  PEI RVNLA V+L LK MG+ DP  FD++T PS A+L +A   L  LGAL+ +  +T+ G+KMA LP+DP +A LL +S  P + C  E+LT  A LSAEN++F
Sbjct:  516 IRYVVDCGKYKTRDFSDTTGMESLTVQDISRAQAAQRSGRAGRVSAGICFRLYTEDAFDNLAEAGVPEISRVNLAAVLLVLKGMGVSDPLQFDFLTRPSTASLRRACELLYALGALNDNMELTSHGRKMAKLPVDPIYAHLLLQS--PSYGCTNEMLTAVAMLSAENVMF 683          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A225X060_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X060_9STRA)

HSP 1 Score: 165 bits (418), Expect = 1.860e-44
Identity = 87/174 (50.00%), Postives = 125/174 (71.84%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLPK 174
            +R+VVD+G VK RSF  S+GME L+++ VSK QA QR GRAGREAPG+C+RL+ E+++ +L +   P+I RV+L  VVLQLK MGI+D   FD++  P + +L+KAL  L  LGALD+ G +T  G++MA LP++P +A +L ++AE   SC +E L+  A LS E++ FY P+
Sbjct:  341 VRYVVDTGLVKQRSFVASSGMELLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEVVVLQLKCMGIDDVLGFDFIEKPLKTSLIKALEKLYALGALDYKGKLTTRGRQMAGLPVEPMYAVMLLKAAE--LSCAEEALSVVAMLSVESI-FYSPR 511          
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A448ZB75_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB75_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.650e-44
Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 0
Query:    1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 170
            IR+VVD GK K R F  +TGME L  +D+S+ QA QR GRAGR + G+C RLY ED++  L +A  PEI RVNLA V+L LK MG+ DP  FD++T PS  +L +A   L  LGAL  S  +TA G+KMA LP+DP +A LL +S  P + C  E+LT  + LSAEN++F
Sbjct:  511 IRYVVDCGKHKTRDFSDATGMESLTVQDISRAQAAQRTGRAGRVSAGLCFRLYTEDAFDGLAEASVPEISRVNLASVLLVLKGMGVSDPLQFDFLTRPSTTSLRRACELLYALGALSDSMELTAHGRKMAKLPVDPIYAHLLLQS--PSYGCTSEMLTAVSMLSAENVMF 678          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZX9_ECTSI1.090e-9189.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2UR69_9STRA7.160e-5056.65Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7S2UPS3_9STRA1.460e-4856.65Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A835ZD99_9STRA4.980e-4853.53P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4JCP6_9STRA5.290e-4858.38Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
B8C4C7_THAPS8.440e-4754.91Atp-dependent RNA helicase n=1 Tax=Thalassiosira p... [more]
A0A1E7FH80_9STRA2.300e-4653.53p-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S4ACM8_9STRA4.130e-4552.35Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A225X060_9STRA1.860e-4450.00DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora me... [more]
A0A448ZB75_9STRA3.650e-4452.35Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 105..172
e-value: 3.5E-8
score: 43.2
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 106..169
e-value: 2.2E-16
score: 60.0
NoneNo IPR availableGENE3D1.20.120.1080coord: 73..173
e-value: 2.1E-18
score: 68.2
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..173
NoneNo IPR availablePANTHERPTHR18934:SF118ATP-DEPENDENT RNA HELICASE DHX33coord: 1..173
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..63
e-value: 8.7E-20
score: 73.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig144contigP-littoralis_Contig144:148118..151337 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig144.48.1mRNA_P-littoralis_Contig144.48.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig144 148118..151338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig144.48.1 ID=prot_P-littoralis_Contig144.48.1|Name=mRNA_P-littoralis_Contig144.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp
IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCH
RLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSR
AALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRF
SCVKEVLTTAACLSAENLLFYLPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007502Helicase-assoc_dom
IPR027417P-loop_NTPase