mRNA_P-littoralis_Contig144.48.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: D7FZX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX9_ECTSI) HSP 1 Score: 297 bits (760), Expect = 1.090e-91 Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLPK 522
IR+VVDSGKVKVRSFQ STGMEFLRS+DVSK QATQRAGRAGREAPGVC+RL+REDSYLELGDAP PEILRVNLAQVVLQLKVMGI+DP+TFDYVTAPSRAALLKAL TLAMLGALD S VT DG+KMAALPLDPAFA LL RSAEPRFSCVKEVLTT ACLSAENLLFY PK
Sbjct: 691 IRYVVDSGKVKVRSFQASTGMEFLRSQDVSKAQATQRAGRAGREAPGVCYRLFREDSYLELGDAPIPEILRVNLAQVVLQLKVMGIDDPSTFDYVTAPSRAALLKALKTLAMLGALDKSARVTPDGRKMAALPLDPAFAHLLVRSAEPRFSCVKEVLTTVACLSAENLLFYPPK 864
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S2UR69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UR69_9STRA) HSP 1 Score: 174 bits (441), Expect = 7.160e-50 Identity = 98/173 (56.65%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 519
I+FVVD GK K R F +TGME L ++SK QA QR+GRAGR + GVC RLY ED + L D PEILRVNLA VVLQLK MG+ DP +FD++T P +LLKA L L A+D +T GKKMA LPLDP FA LL +S P+F C E+LT A LSAEN+ FY P
Sbjct: 172 IKFVVDCGKQKTRDFSGTTGMESLTVANISKAQAAQRSGRAGRVSSGVCFRLYTEDGFDSLDDTTVPEILRVNLAHVVLQLKGMGVHDPRSFDFLTPPDVKSLLKAFELLYALQAIDADMNLTLYGKKMAKLPLDPVFANLLLQS--PKFGCTAEMLTGVAMLSAENI-FYRP 341
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S2UPS3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UPS3_9STRA) HSP 1 Score: 174 bits (441), Expect = 1.460e-48 Identity = 98/173 (56.65%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 519
I+FVVD GK K R F +TGME L ++SK QA QR+GRAGR + GVC RLY ED + L D PEILRVNLA VVLQLK MG+ DP +FD++T P +LLKA L L A+D +T GKKMA LPLDP FA LL +S P+F C E+LT A LSAEN+ FY P
Sbjct: 172 IKFVVDCGKQKTRDFSGTTGMESLTVANISKAQAAQRSGRAGRVSSGVCFRLYTEDGFDSLDDTTVPEILRVNLAHVVLQLKGMGVHDPRSFDFLTPPDVKSLLKAFELLYALQAIDADMNLTLYGKKMAKLPLDPVFANLLLQS--PKFGCTAEMLTGVAMLSAENI-FYRP 341
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A835ZD99_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD99_9STRA) HSP 1 Score: 175 bits (443), Expect = 4.980e-48 Identity = 91/170 (53.53%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 510
+R+V+D G VK RS GME L+ VSK QA QRAGRAGREAPG C+R+Y E ++L L + PEI RV+L+QVVLQLKV+GI+ FD+V+ PS AL+ AL +L +LG LD +G +T G+++A LPL P F+ LL SAEP F C EVL +CLSA+N+ F
Sbjct: 343 VRYVIDCGLVKQRSVVAGAGMEALKVVPVSKSQAQQRAGRAGREAPGACYRIYTESTFLALAQSTPPEIERVDLSQVVLQLKVIGIDKVDQFDFVSPPSPTALIAALESLYLLGTLDAAGDLTPHGRRIAQLPLAPTFSHLLLASAEPAFECTAEVLAAVSCLSADNVFF 512
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S4JCP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JCP6_9STRA) HSP 1 Score: 175 bits (443), Expect = 5.290e-48 Identity = 101/173 (58.38%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 519
IRFVVDSGKVK R + STGME L DVSK QA+QR GRAGR A G C RLY E + L D PEILRVNL VVLQLK MG+ DP FD++T PS ALL A L LGA+D +T GK +A LPLDP FA LL RSAE F C E+LT + LSA+N+ FY P
Sbjct: 366 IRFVVDSGKVKRRDYAGSTGMESLTVSDVSKAQASQRTGRAGRVAAGYCFRLYPEVGFDRLEDVAPPEILRVNLGHVVLQLKCMGVHDPRNFDFLTPPSPEALLAAFELLYALGAVDGEMNLTPKGKNLAKLPLDPIFANLLLRSAE--FECTNEMLTAVSMLSADNV-FYRP 535
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: B8C4C7_THAPS (Atp-dependent RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4C7_THAPS) HSP 1 Score: 171 bits (434), Expect = 8.440e-47 Identity = 95/173 (54.91%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLP 519
I++VVD GK K R + STGME L+ D+SK QA QR GRAGR + GVC RLY E ++ L D PEILRVNLA VVLQLK MG+ DP +F ++T PS ++K+ L LGA+D S +T GK+M+ LPLDP FA LL +S P+F CV EVLT LSAEN+ FY P
Sbjct: 328 IKYVVDCGKHKSREYSSSTGMESLKVSDISKAQAAQRMGRAGRVSEGVCLRLYPEIAFDSLADTTVPEILRVNLASVVLQLKGMGVHDPRSFSFLTPPSPENIVKSFELLTTLGAIDKSMNLTMYGKEMSKLPLDPVFAHLLLQS--PKFECVSEVLTVVGMLSAENI-FYRP 497
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A1E7FH80_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=2 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH80_9STRA) HSP 1 Score: 171 bits (433), Expect = 2.300e-46 Identity = 91/170 (53.53%), Postives = 117/170 (68.82%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 510
IR+VVD GK K+R F STGME L +D+SK QA QR GRAGR + G+C RLY ED++ + + PEI RVNLAQV+L LK MG+ DP FDY+T PS A++ +A L LGAL + ++ GKKMA LP+DP +A LL +S P++ C E+LT A LSAEN+LF
Sbjct: 426 IRYVVDCGKHKIRDFSNSTGMESLTVQDISKAQAAQRMGRAGRVSAGICFRLYTEDAFDSMAETAVPEISRVNLAQVILMLKGMGVFDPLQFDYLTKPSAASIRRACQNLFALGALTENMELSNHGKKMARLPVDPIYAHLLLQS--PKYGCTHEMLTAVAMLSAENVLF 593
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A7S4ACM8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACM8_9STRA) HSP 1 Score: 168 bits (425), Expect = 4.130e-45 Identity = 89/170 (52.35%), Postives = 118/170 (69.41%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 510
IR+VVD GK K R F +TGME L +D+S+ QA QR+GRAGR + G+C RLY ED++ L +A PEI RVNLA V+L LK MG+ DP FD++T PS A+L +A L LGAL+ + +T+ G+KMA LP+DP +A LL +S P + C E+LT A LSAEN++F
Sbjct: 516 IRYVVDCGKYKTRDFSDTTGMESLTVQDISRAQAAQRSGRAGRVSAGICFRLYTEDAFDNLAEAGVPEISRVNLAAVLLVLKGMGVSDPLQFDFLTRPSTASLRRACELLYALGALNDNMELTSHGRKMAKLPVDPIYAHLLLQS--PSYGCTNEMLTAVAMLSAENVMF 683
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A225X060_9STRA (DEAD/DEAH box RNA helicase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X060_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.860e-44 Identity = 87/174 (50.00%), Postives = 125/174 (71.84%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLFYLPK 522
+R+VVD+G VK RSF S+GME L+++ VSK QA QR GRAGREAPG+C+RL+ E+++ +L + P+I RV+L VVLQLK MGI+D FD++ P + +L+KAL L LGALD+ G +T G++MA LP++P +A +L ++AE SC +E L+ A LS E++ FY P+
Sbjct: 341 VRYVVDTGLVKQRSFVASSGMELLQTESVSKAQAWQRTGRAGREAPGICYRLFPEETFEQLPERAIPDIQRVSLEVVVLQLKCMGIDDVLGFDFIEKPLKTSLIKALEKLYALGALDYKGKLTTRGRQMAGLPVEPMYAVMLLKAAE--LSCAEEALSVVAMLSVESI-FYSPR 511
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Match: A0A448ZB75_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZB75_9STRA) HSP 1 Score: 165 bits (418), Expect = 3.650e-44 Identity = 89/170 (52.35%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 1 IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHRLYREDSYLELGDAPTPEILRVNLAQVVLQLKVMGIEDPATFDYVTAPSRAALLKALNTLAMLGALDWSGGVTADGKKMAALPLDPAFARLLARSAEPRFSCVKEVLTTAACLSAENLLF 510
IR+VVD GK K R F +TGME L +D+S+ QA QR GRAGR + G+C RLY ED++ L +A PEI RVNLA V+L LK MG+ DP FD++T PS +L +A L LGAL S +TA G+KMA LP+DP +A LL +S P + C E+LT + LSAEN++F
Sbjct: 511 IRYVVDCGKHKTRDFSDATGMESLTVQDISRAQAAQRTGRAGRVSAGLCFRLYTEDAFDGLAEASVPEISRVNLASVLLVLKGMGVSDPLQFDFLTRPSTTSLRRACELLYALGALSDSMELTAHGRKMAKLPVDPIYAHLLLQS--PSYGCTSEMLTAVSMLSAENVMF 678 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.48.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig144.48.1 >prot_P-littoralis_Contig144.48.1 ID=prot_P-littoralis_Contig144.48.1|Name=mRNA_P-littoralis_Contig144.48.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=174bp IRFVVDSGKVKVRSFQPSTGMEFLRSKDVSKPQATQRAGRAGREAPGVCHback to top mRNA from alignment at P-littoralis_Contig144:148118..151338+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig144.48.1 ID=mRNA_P-littoralis_Contig144.48.1|Name=mRNA_P-littoralis_Contig144.48.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3221bp|location=Sequence derived from alignment at P-littoralis_Contig144:148118..151338+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig144:148118..151338+ >mRNA_P-littoralis_Contig144.48.1 ID=mRNA_P-littoralis_Contig144.48.1|Name=mRNA_P-littoralis_Contig144.48.1|organism=Pylaiella littoralis U1_48|type=CDS|length=522bp|location=Sequence derived from alignment at P-littoralis_Contig144:148118..151338+ (Pylaiella littoralis U1_48)back to top |