prot_P-littoralis_Contig144.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig144.18.1
Unique Nameprot_P-littoralis_Contig144.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length196
Homology
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BLAST of mRNA_P-littoralis_Contig144.18.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 5.750e-19
Identity = 53/99 (53.54%), Postives = 69/99 (69.70%), Query Frame = 0 
Query:    2 EAAQWREKELKGIPLALAKVNVQGVSGLAARPDGSEDPLRSLAGTIFRVKPDNRD--EAERLLRRCLAIKESKLGPEDVAVAHTLYELGFCVQEAGRLE 98
            EAA WR KE++ +PLALA+V  Q  SG     DG+   L S+A T+ + KP + D  +AE LLRR L I+E+ LG ED+AVA TLY+LG C++EAGRLE
Sbjct:  517 EAADWRGKEVEALPLALARVQSQTDSGKVEGLDGANG-LASVASTMLKFKPGSIDRAQAEVLLRRSLEIQEAALGHEDIAVADTLYQLGICLREAGRLE 614
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BLAST of mRNA_P-littoralis_Contig144.18.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.710e-17
Identity = 50/97 (51.55%), Postives = 66/97 (68.04%), Query Frame = 0 
Query:    2 EAAQWREKELKGIPLALAKVNVQGVSGLAARPDGSEDPLRSLAGTIFRVKPDNRDEAERLLRRCLAIKESKLGPEDVAVAHTLYELGFCVQEAGRLE 98
            EAA+W EKE++G+PLALA++N    SGL A  D + D L S+A T    +P +R  AE LLRR L +KE+ LGPE + VA TL +LG   +EAGRL+
Sbjct:  660 EAAKWHEKEVEGLPLALARMNALVRSGLEADLDDA-DSLSSVAATALEFRPGDRALAETLLRRSLDVKEAILGPEHLQVADTLRQLGVSAREAGRLD 755
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BLAST of mRNA_P-littoralis_Contig144.18.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 1.580e-9
Identity = 38/99 (38.38%), Postives = 60/99 (60.61%), Query Frame = 0 
Query:    2 EAAQWREKELKGIPLALAKVNVQGVSGLAARPDGSEDP--LRSLAGTIFRVKPDNRDEAERLLRRCLAIKESKLGPEDVAVAHTLYELGFCVQEAGRLE 98
            E  +W+ +  + +PLA+ ++ ++  +G     DG +D   L S+A T+  + PD+R  AE L+R  L I+E KLG +DV VA+ L+ LG  V  AGRL+
Sbjct:  660 EMTEWQAELRRVLPLAVVRMQLRLDAG---EVDGVDDANALNSIASTMLNLAPDDRGNAEALMRHSLEIQEVKLGRDDVYVAYNLHHLGVSVHLAGRLD 755
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig144.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYW3_9PHAE5.750e-1953.54NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
D7FZW8_ECTSI1.710e-1751.55NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KLK9_9PHAE1.580e-938.38NB-ARC domain-containing protein n=2 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 123..156
e-value: 0.068
score: 22.3
coord: 81..114
e-value: 7.7
score: 15.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 81..114
score: 8.0834
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 123..156
score: 8.1424
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 40..196
e-value: 2.7E-43
score: 150.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 81..194
NoneNo IPR availablePFAMPF13424TPR_12coord: 80..155
e-value: 9.3E-18
score: 64.3
NoneNo IPR availablePFAMPF13374TPR_10coord: 54..76
e-value: 0.0048
score: 16.7
NoneNo IPR availablePANTHERPTHR45783KINESIN LIGHT CHAINcoord: 54..192
NoneNo IPR availablePANTHERPTHR45783:SF3KINESIN LIGHT CHAINcoord: 54..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig144contigP-littoralis_Contig144:58450..59037 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig144.18.1mRNA_P-littoralis_Contig144.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig144 58450..59037 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig144.18.1 ID=prot_P-littoralis_Contig144.18.1|Name=mRNA_P-littoralis_Contig144.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
VEAAQWREKELKGIPLALAKVNVQGVSGLAARPDGSEDPLRSLAGTIFRV
KPDNRDEAERLLRRCLAIKESKLGPEDVAVAHTLYELGFCVQEAGRLEEA
EELLRRSLAIGESKLGPEDVAVARTLHQLGDCAREAGQLEEAEELWRRCL
AIRESKLGPEDVTVAHTLDWLCTCVREAGRVEEAEELWRRCLAIRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf