prot_P-littoralis_Contig143.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig143.78.1
Unique Nameprot_P-littoralis_Contig143.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length355
Homology
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BLAST of mRNA_P-littoralis_Contig143.78.1 vs. uniprot
Match: D8LC19_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC19_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 4.910e-72
Identity = 125/191 (65.45%), Postives = 144/191 (75.39%), Query Frame = 0 
Query:  113 VAVLAGCLAVLPFNSTVTMLEVPLLTADECRAVAHATAEAVSIPGFVPSISVFDPDTEVPVQDLPDEIAAMVSAALEKKMMPFVTLEYGGLGEVTLDKRLYVEHHQPDHELSLPAHVRRGQLSFRVELNPPESKYVGGGGVFLGSMGRTITPGLGSGLVLPAKLRHSSSQPGPRERSVLVGSLTIKGRDPW 303
            + +LAGCLAVLPFNSTVTMLEVPL T  EC AVA ATAEAVS PGF P+  + DP TEVPVQDLP E++ MVS AL +++MPFV LE+   G+V LD+RLYVEH+Q  HE    AHVR+GQL+ RVEL+PPESKYVGGGGV L SMG+TITPG+GSGLVLPAKL   S   G   RSV+VG L       W
Sbjct:    1 MVILAGCLAVLPFNSTVTMLEVPLFTPAECLAVAEATAEAVSRPGFSPTSFLLDPSTEVPVQDLPAEVSTMVSEALRQRLMPFVGLEFSSQGQVVLDERLYVEHYQAYHEPPPVAHVRQGQLALRVELDPPESKYVGGGGVRLESMGKTITPGMGSGLVLPAKL---SRLVGSACRSVIVGGLRYISHTAW 188
[Close]
BLAST of mRNA_P-littoralis_Contig143.78.1 vs. uniprot
Match: D8LC18_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC18_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 3.390e-7
Identity = 30/49 (61.22%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:   39 EPGWRRMKRSLIGMLLIAGFAMMDPLILKEGITVVLPDHKALLALVVLF 87
            E  +RR+KRSLI M L  G AM D L+LKEG+TVV+PDHK LLA+ ++F
Sbjct:   47 ETRYRRLKRSLILMTLSCGIAMTDLLVLKEGVTVVIPDHKPLLAVGMIF 95
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig143.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LC19_ECTSI4.910e-7265.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LC18_ECTSI3.390e-761.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 334..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig143contigP-littoralis_Contig143:276507..288788 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig143.78.1mRNA_P-littoralis_Contig143.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig143 276341..289550 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig143.78.1 ID=prot_P-littoralis_Contig143.78.1|Name=mRNA_P-littoralis_Contig143.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=355bp
MPKKSRRASNGGIAARPTPRPTPTSTPTTPPPGGQQGDEPGWRRMKRSLI
GMLLIAGFAMMDPLILKEGITVVLPDHKALLALVVLFWWLVWKRWVSSDK
RGMHPFFRTVGFVAVLAGCLAVLPFNSTVTMLEVPLLTADECRAVAHATA
EAVSIPGFVPSISVFDPDTEVPVQDLPDEIAAMVSAALEKKMMPFVTLEY
GGLGEVTLDKRLYVEHHQPDHELSLPAHVRRGQLSFRVELNPPESKYVGG
GGVFLGSMGRTITPGLGSGLVLPAKLRHSSSQPGPRERSVLVGSLTIKGR
DPWQRFVGMWWLWGLFSRRVRYIADRRLSSSGVDNIPAPEPEPGTEEAVA
VEEL*
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