mRNA_P-littoralis_Contig1422.1.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: W5U108_9FLAO (60 kDa chaperonin (Fragment) n=48 Tax=Candidatus Uzinura diaspidicola TaxID=670956 RepID=W5U108_9FLAO) HSP 1 Score: 178 bits (452), Expect = 1.040e-50 Identity = 92/212 (43.40%), Postives = 143/212 (67.45%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
+++ S +I Q+A+ISAN D+ GKLIAEAF KVG EGVI V+++K + TYVD+VEGM+ + GF +PYFV NT+K +E +NP I++ KK+ ++ +L V +++P++ I++E+ EAL+ L VN ++ AV AP FG RK L DL +TG T+IS+++GT + TI+ LG E++ + + TTIV G GD+++++S V
Sbjct: 34 QEVEVGSKKIEQVASISANNDKITGKLIAEAFGKVGKEGVITVEEAKSTETYVDVVEGMQFDRGFQSPYFVTNTDKMITELDNPYILLCEKKISVMKDLLPLLEPVAQSSKPLLIISEEVDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDLAILTGGTVISEETGTKLEDATIQMLGKAERVSIDKDNTTIVNGFGDKKEIQSRV 245
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A4Q7PH02_9FLAO (Chaperonin GroEL n=16 Tax=Bacteroidetes TaxID=976 RepID=A0A4Q7PH02_9FLAO) HSP 1 Score: 184 bits (466), Expect = 7.240e-50 Identity = 92/212 (43.40%), Postives = 143/212 (67.45%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
K++ +S +I+Q+A ISAN DE +G LIA+AF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K T+E ENP I++ +KK+ ++ VL V + +P++ IA+++ EAL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G ++ TIE LG EK+ + + TT+V G GD+E +++ V
Sbjct: 135 KEVGSSSDKIKQVAAISANNDETIGDLIAKAFDKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTNSEKMTTELENPYILLFDKKISAMKDLLPVLEPVAQSGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATIEQLGTAEKVAIDKDNTTVVNGAGDEEMIKNRV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A359DUM8_9FLAO (60 kDa chaperonin (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A359DUM8_9FLAO) HSP 1 Score: 178 bits (452), Expect = 4.070e-49 Identity = 87/212 (41.04%), Postives = 141/212 (66.51%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
+++ S +I+Q+A+ISAN DE +G LIAEAF+KVG +GVI V+++K + TYVD+VEGM+ + G+ +PYFV N +K +E ENP I++ KK+ +++ +L V + +P + I++E+ +AL+ L VN ++ AV AP FG RK L D+ +TG T+ISD+ T ++ ++E LG E++++ + TTIV GKGD +++ V
Sbjct: 135 QEVGDTSDKIKQVASISANNDETIGSLIAEAFSKVGKKGVITVEEAKGTETYVDVVEGMQFDRGYQSPYFVTNADKMIAELENPYILLCEKKISNLQEILPLLEPVAQSGRPFLIISEEVEGQALATLVVNRLRGSLKIAAVKAPGFGDRRKAMLQDIAILTGGTVISDEQDTSLENASLEMLGQAERVIIDKDNTTIVNGKGDPVSIKARV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1F1EA67_9PORP (Chaperonin GroEL n=2 Tax=Porphyromonas TaxID=836 RepID=A0A1F1EA67_9PORP) HSP 1 Score: 181 bits (460), Expect = 4.890e-49 Identity = 94/219 (42.92%), Postives = 145/219 (66.21%), Query Frame = 2
Query: 389 KDISKNSAEI-------RQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
+D+ K S E+ +AT+SANGDEE+GKLIAEAF KV EGVI V+++K TYVD+VEGM+ + G+++PYFV +T+K +EF+NP I++ +KK+ ++ +L V + +P++ IA+++ +EAL+ L VN ++ AV AP +G RK L D+ +TGAT++S++ G ++ T + LG EKI V + TTIV GKGD++ L + V
Sbjct: 128 EDLKKQSVEVGTDLKKVEYVATLSANGDEEIGKLIAEAFGKVKKEGVITVEEAKGMETYVDVVEGMQFDKGYISPYFVTDTDKMLTEFDNPYILIYDKKISNIKDILPILEKVSQSGRPLLIIAEDVESEALATLVVNKLRGILQIAAVKAPGYGDRRKQMLEDIAILTGATVVSEEVGLKLENATADMLGSAEKISVDKDHTTIVGGKGDKDALANRV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1J0LKK1_9FLAO (Chaperonin GroEL n=1 Tax=Flavobacteriaceae bacterium UJ101 TaxID=1150389 RepID=A0A1J0LKK1_9FLAO) HSP 1 Score: 181 bits (460), Expect = 5.150e-49 Identity = 91/212 (42.92%), Postives = 140/212 (66.04%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
K++ +NS +I+Q+A ISAN D +G LIAEAF KVG EGVI V+++K + T VD+VEGM+ + GF++PYFV NT K T+E ENP I++ +KK+ + ++ +L + + +P++ IA+++ +ALS L VN ++ AV AP FG RK L D+ +T T+I+++ G D T+E LG EK+ + + TT+V G GDQ K+ + V
Sbjct: 135 KEVGENSDKIQQVAAISANNDNTIGSLIAEAFGKVGKEGVITVEEAKGTDTTVDVVEGMQFDRGFISPYFVTNTEKMTAELENPYILLHDKKIANLNDILPILEPIAQSGRPLLIIAEDVEAQALSTLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTNGTVITEELGMALDQTTLEMLGSAEKVSIDKDNTTVVNGAGDQSKIEARV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A511NDX4_9FLAO (Chaperonin GroEL n=24 Tax=Bacteria TaxID=2 RepID=A0A511NDX4_9FLAO) HSP 1 Score: 181 bits (459), Expect = 6.820e-49 Identity = 88/212 (41.51%), Postives = 142/212 (66.98%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
+++ +S +I+Q+A+ISAN D+ +G LIAEAF+KVG EGVI V+++K + TYVD+VEGM+ + G+ +PYFV N +K +E ENP I++ KK+ +++ +L V + +P + I++E+ +AL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G + T+E LG E++V+ + TT+V G GD E+++S V
Sbjct: 135 QEVGDSSEKIKQVASISANNDDTIGSLIAEAFSKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYQSPYFVTNADKMIAELENPYILLCEKKISNLQEILPLLEPVAQSGRPFLIISEEVEGQALATLVVNRLRGSLKIAAVKAPGFGDRRKAMLQDIAILTGGTVISEEQGITLETATLEMLGTAERVVIDKDNTTVVNGAGDAEQIKSRV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A383TXM7_9FLAO (Chaperonin GroEL n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A383TXM7_9FLAO) HSP 1 Score: 180 bits (456), Expect = 2.050e-48 Identity = 89/211 (42.18%), Postives = 143/211 (67.77%), Query Frame = 2
Query: 392 DISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
++ +S +I+Q+A+IS+N DE++G+LI+EAF+KVG EGVI V+++K + TYVD+VEGM+ + G+ +PYFV N+ K T+E ENP I++ KK+ ++ VL V +P++ I++E+ EAL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G + T++ LG EK+ + + TTIV G GD+E++++ V
Sbjct: 136 EVGDSSDKIKQVASISSNNDEKIGELISEAFSKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYQSPYFVTNSEKMTAELENPYILLVEKKVSSMKDLLPVLEPVAQQGKPLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGYTLEAATLDMLGTAEKVSIDKDNTTIVNGSGDEEQIKARV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A2E0F6L5_9FLAO (60 kDa chaperonin (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E0F6L5_9FLAO) HSP 1 Score: 175 bits (444), Expect = 4.960e-48 Identity = 88/212 (41.51%), Postives = 139/212 (65.57%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
K + +S +I+QIA+ISAN D +G LI EAF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K S+ ENP I++ +KK+ ++ +L V T +P++ IA+++ EAL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G + ++ TI+ LG E++ + + TTIV G G+++ + V
Sbjct: 135 KTVGNSSEKIQQIASISANNDNAIGNLITEAFEKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTNSEKMESDLENPYILLYDKKISAMKDLLPILEPVAQTGKPLLVIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFNIENTTIDMLGTAERVTIDKDNTTIVNGSGEKKSINERV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1M6EXR2_9FLAO (Chaperonin GroEL n=13 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1M6EXR2_9FLAO) HSP 1 Score: 179 bits (453), Expect = 5.360e-48 Identity = 86/211 (40.76%), Postives = 143/211 (67.77%), Query Frame = 2
Query: 392 DISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
++ +S +I+Q+A+ISAN D+ +G+LIA+AF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K T++ E+P I++ +KK+ +M +L V T +P++ +A+++ EAL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G ++ T+E LG EK+ + + TT+V G G+ E +++ V
Sbjct: 136 EVGSSSEQIKQVASISANNDDVIGELIAQAFNKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYLSPYFVTNSEKMTTDLESPYILIYDKKISTMKDLMPILEPVAQTGKPLLIVAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATLEQLGTAEKVSIDKDNTTLVNGAGEDENIKARV 346
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A7T7R0_NEMVE (Predicted protein (Fragment) n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7T7R0_NEMVE) HSP 1 Score: 173 bits (439), Expect = 5.770e-48 Identity = 84/212 (39.62%), Postives = 141/212 (66.51%), Query Frame = 2
Query: 389 KDISKNSAEIRQIATISANGDEEMGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 1021
K + +S +I+Q+A ISAN D+ +G LIA+AF+KVG EGVI V+++K TYVD+VEGM+ + G+++PYFV + +K ++ ENP I++ +KK+ +++ +L V +++P++ IA+++ +AL+ L VN ++ AV AP FG RK L D+ +TG T+IS++ G ++ T++ LG E + + + TTIV G GD E +++ V
Sbjct: 37 KKVGNSSEKIKQVAAISANNDDTIGDLIAQAFSKVGKEGVITVEEAKGMETYVDVVEGMQFDRGYLSPYFVTDADKMVADLENPYILLFDKKISNLQEILPILEPVAQSSRPLLIIAEDVDGQALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFSLENATLDLLGTAETVTIDKDNTTIVNGSGDAEAIKARV 248 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1422.1.1 >prot_P-littoralis_Contig1422.1.1 ID=prot_P-littoralis_Contig1422.1.1|Name=mRNA_P-littoralis_Contig1422.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFVNTback to top mRNA from alignment at P-littoralis_Contig1422:21..1044- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1422.1.1 ID=mRNA_P-littoralis_Contig1422.1.1|Name=mRNA_P-littoralis_Contig1422.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1024bp|location=Sequence derived from alignment at P-littoralis_Contig1422:21..1044- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1422:21..1044- >mRNA_P-littoralis_Contig1422.1.1 ID=mRNA_P-littoralis_Contig1422.1.1|Name=mRNA_P-littoralis_Contig1422.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=567bp|location=Sequence derived from alignment at P-littoralis_Contig1422:21..1044- (Pylaiella littoralis U1_48)back to top |