prot_P-littoralis_Contig1422.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig1422.1.1
Unique Name	prot_P-littoralis_Contig1422.1.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	189

Homology

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: W5U108_9FLAO (60 kDa chaperonin (Fragment) n=48 Tax=Candidatus Uzinura diaspidicola TaxID=670956 RepID=W5U108_9FLAO)

HSP 1 Score: 159 bits (403), Expect = 1.770e-45
Identity = 83/188 (44.15%), Postives = 127/188 (67.55%), Query Frame = 0

Query:    2 GKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            GKLIAEAF KVG EGVI V+++K + TYVD+VEGM+ + GF +PYFV NT+K  +E +NP I++  KK+     ++ +L  V  +++P++ I++E+  EAL+ L VN ++      AV AP FG  RK  L DL  +TG T+IS+++GT  +  TI+ LG  E++ + +  TTIV G GD+++++S V
Sbjct:   58 GKLIAEAFGKVGKEGVITVEEAKSTETYVDVVEGMQFDRGFQSPYFVTNTDKMITELDNPYILLCEKKISVMKDLLPLLEPVAQSSKPLLIISEEVDGEALATLVVNKIRGSLKVAAVKAPGFGDRRKAMLEDLAILTGGTVISEETGTKLEDATIQMLGKAERVSIDKDNTTIVNGFGDKKEIQSRV 245

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A4Q7PH02_9FLAO (Chaperonin GroEL n=16 Tax=Bacteroidetes TaxID=976 RepID=A0A4Q7PH02_9FLAO)

HSP 1 Score: 159 bits (403), Expect = 6.810e-43
Identity = 81/189 (42.86%), Postives = 126/189 (66.67%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIA+AF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K T+E ENP I++ +KK+     ++ VL  V  + +P++ IA+++  EAL+ L VN ++      AV AP FG  RK  L D+  +TG T+IS++ G   ++ TIE LG  EK+ + +  TT+V G GD+E +++ V
Sbjct:  158 IGDLIAKAFDKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTNSEKMTTELENPYILLFDKKISAMKDLLPVLEPVAQSGKPLLIIAEDVDGEALATLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATIEQLGTAEKVAIDKDNTTVVNGAGDEEMIKNRV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A511NDX4_9FLAO (Chaperonin GroEL n=24 Tax=Bacteria TaxID=2 RepID=A0A511NDX4_9FLAO)

HSP 1 Score: 159 bits (402), Expect = 8.850e-43
Identity = 79/189 (41.80%), Postives = 124/189 (65.61%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIAEAF+KVG EGVI V+++K + TYVD+VEGM+ + G+ +PYFV N +K  +E ENP I++  KK+    +++ +L  V  + +P + I++E+  +AL+ L VN ++      AV AP FG  RK  L D+  +TG T+IS++ G   +  T+E LG  E++V+ +  TT+V G GD E+++S V
Sbjct:  158 IGSLIAEAFSKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYQSPYFVTNADKMIAELENPYILLCEKKISNLQEILPLLEPVAQSGRPFLIISEEVEGQALATLVVNRLRGSLKIAAVKAPGFGDRRKAMLQDIAILTGGTVISEEQGITLETATLEMLGTAERVVIDKDNTTVVNGAGDAEQIKSRV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A359DUM8_9FLAO (60 kDa chaperonin (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A359DUM8_9FLAO)

HSP 1 Score: 156 bits (394), Expect = 1.140e-42
Identity = 77/189 (40.74%), Postives = 124/189 (65.61%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIAEAF+KVG +GVI V+++K + TYVD+VEGM+ + G+ +PYFV N +K  +E ENP I++  KK+    +++ +L  V  + +P + I++E+  +AL+ L VN ++      AV AP FG  RK  L D+  +TG T+ISD+  T  ++ ++E LG  E++++ +  TTIV GKGD   +++ V
Sbjct:  158 IGSLIAEAFSKVGKKGVITVEEAKGTETYVDVVEGMQFDRGYQSPYFVTNADKMIAELENPYILLCEKKISNLQEILPLLEPVAQSGRPFLIISEEVEGQALATLVVNRLRGSLKIAAVKAPGFGDRRKAMLQDIAILTGGTVISDEQDTSLENASLEMLGQAERVIIDKDNTTIVNGKGDPVSIKARV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1F1EA67_9PORP (Chaperonin GroEL n=2 Tax=Porphyromonas TaxID=836 RepID=A0A1F1EA67_9PORP)

HSP 1 Score: 158 bits (400), Expect = 1.720e-42
Identity = 81/189 (42.86%), Postives = 127/189 (67.20%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +GKLIAEAF KV  EGVI V+++K   TYVD+VEGM+ + G+++PYFV +T+K  +EF+NP I++ +KK+     ++ +L  V  + +P++ IA+++ +EAL+ L VN ++      AV AP +G  RK  L D+  +TGAT++S++ G   ++ T + LG  EKI V +  TTIV GKGD++ L + V
Sbjct:  158 IGKLIAEAFGKVKKEGVITVEEAKGMETYVDVVEGMQFDKGYISPYFVTDTDKMLTEFDNPYILIYDKKISNIKDILPILEKVSQSGRPLLIIAEDVESEALATLVVNKLRGILQIAAVKAPGYGDRRKQMLEDIAILTGATVVSEEVGLKLENATADMLGSAEKISVDKDHTTIVGGKGDKDALANRV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1W6MN34_9FLAO (Chaperonin GroEL n=20 Tax=Flavobacteriia TaxID=117743 RepID=A0A1W6MN34_9FLAO)

HSP 1 Score: 158 bits (399), Expect = 2.570e-42
Identity = 81/189 (42.86%), Postives = 125/189 (66.14%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIA+AF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K T+E ENP I++ +KK+    ++M VL  V  T +P++ IA+++  EAL+ L VN ++      AV AP FG  RK  L D+  +TG T+IS++ G   ++ TI+ LG  EK+ + +  TTIV G G  + +++ V
Sbjct:  158 VGDLIAQAFGKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTNSEKMTTELENPYILLFDKKISTMKELMPVLEPVAQTGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATIDMLGTAEKVDIDKDNTTIVNGAGSNDDIKARV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A383TXM7_9FLAO (Chaperonin GroEL n=2 Tax=Flavobacteriales TaxID=200644 RepID=A0A383TXM7_9FLAO)

HSP 1 Score: 158 bits (399), Expect = 2.600e-42
Identity = 80/189 (42.33%), Postives = 125/189 (66.14%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G+LI+EAF+KVG EGVI V+++K + TYVD+VEGM+ + G+ +PYFV N+ K T+E ENP I++  KK+     ++ VL  V    +P++ I++E+  EAL+ L VN ++      AV AP FG  RK  L D+  +TG T+IS++ G   +  T++ LG  EK+ + +  TTIV G GD+E++++ V
Sbjct:  158 IGELISEAFSKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYQSPYFVTNSEKMTAELENPYILLVEKKVSSMKDLLPVLEPVAQQGKPLLIISEEVEGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGYTLEAATLDMLGTAEKVSIDKDNTTIVNGSGDEEQIKARV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1J0LKK1_9FLAO (Chaperonin GroEL n=1 Tax=Flavobacteriaceae bacterium UJ101 TaxID=1150389 RepID=A0A1J0LKK1_9FLAO)

HSP 1 Score: 157 bits (397), Expect = 4.850e-42
Identity = 80/189 (42.33%), Postives = 123/189 (65.08%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIAEAF KVG EGVI V+++K + T VD+VEGM+ + GF++PYFV NT K T+E ENP I++ +KK+   + ++ +L  +  + +P++ IA+++  +ALS L VN ++      AV AP FG  RK  L D+  +T  T+I+++ G   D  T+E LG  EK+ + +  TT+V G GDQ K+ + V
Sbjct:  158 IGSLIAEAFGKVGKEGVITVEEAKGTDTTVDVVEGMQFDRGFISPYFVTNTEKMTAELENPYILLHDKKIANLNDILPILEPIAQSGRPLLIIAEDVEAQALSTLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTNGTVITEELGMALDQTTLEMLGSAEKVSIDKDNTTVVNGAGDQSKIEARV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A3D1ME05_9BACT (60 kDa chaperonin (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3D1ME05_9BACT)

HSP 1 Score: 154 bits (388), Expect = 5.690e-42
Identity = 77/189 (40.74%), Postives = 123/189 (65.08%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G LIA+A  KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K  +E +NP I++ +KK+     ++ VL  V  + +P++ IA+++  EAL+ L VN ++      AV AP FG  RK  L D+ T+TG  +IS++SG   +  T+E LG  EK+V+ +  TT++ G GD   +++ V
Sbjct:  158 IGGLIADAMEKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYLSPYFVTNSEKMETELDNPFILIHDKKISAMKDLLPVLEKVAQSGRPLLIIAEDLEGEALTTLVVNKLRGTLKVAAVKAPGFGDRRKAMLQDIATLTGGEVISEESGLSLEGTTVEQLGTAEKVVMDKDNTTVINGAGDDAAIKARV 346

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BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Match: A0A1M6EXR2_9FLAO (Chaperonin GroEL n=13 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A1M6EXR2_9FLAO)

HSP 1 Score: 157 bits (396), Expect = 6.840e-42
Identity = 77/189 (40.74%), Postives = 126/189 (66.67%), Query Frame = 0

Query:    1 MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFV-NTNKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEALSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTDYDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNV 188
            +G+LIA+AF KVG EGVI V+++K + TYVD+VEGM+ + G+++PYFV N+ K T++ E+P I++ +KK+     +M +L  V  T +P++ +A+++  EAL+ L VN ++      AV AP FG  RK  L D+  +TG T+IS++ G   ++ T+E LG  EK+ + +  TT+V G G+ E +++ V
Sbjct:  158 IGELIAQAFNKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYLSPYFVTNSEKMTTDLESPYILIYDKKISTMKDLMPILEPVAQTGKPLLIVAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTVISEERGFTLENATLEQLGTAEKVSIDKDNTTLVNGAGEDENIKARV 346

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig1422.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
W5U108_9FLAO	1.770e-45	44.15	60 kDa chaperonin (Fragment) n=48 Tax=Candidatus U...	[more]
A0A4Q7PH02_9FLAO	6.810e-43	42.86	Chaperonin GroEL n=16 Tax=Bacteroidetes TaxID=976 ...	[more]
A0A511NDX4_9FLAO	8.850e-43	41.80	Chaperonin GroEL n=24 Tax=Bacteria TaxID=2 RepID=A...	[more]
A0A359DUM8_9FLAO	1.140e-42	40.74	60 kDa chaperonin (Fragment) n=1 Tax=Flavobacteria...	[more]
A0A1F1EA67_9PORP	1.720e-42	42.86	Chaperonin GroEL n=2 Tax=Porphyromonas TaxID=836 R...	[more]
A0A1W6MN34_9FLAO	2.570e-42	42.86	Chaperonin GroEL n=20 Tax=Flavobacteriia TaxID=117...	[more]
A0A383TXM7_9FLAO	2.600e-42	42.33	Chaperonin GroEL n=2 Tax=Flavobacteriales TaxID=20...	[more]
A0A1J0LKK1_9FLAO	4.850e-42	42.33	Chaperonin GroEL n=1 Tax=Flavobacteriaceae bacteri...	[more]
A0A3D1ME05_9BACT	5.690e-42	40.74	60 kDa chaperonin (Fragment) n=1 Tax=Bacteroidetes...	[more]
A0A1M6EXR2_9FLAO	6.840e-42	40.74	Chaperonin GroEL n=13 Tax=Flavobacteriaceae TaxID=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002423	Chaperonin Cpn60/GroEL/TCP-1 family	PFAM	PF00118	Cpn60_TCP1	coord: 2..178 e-value: 1.6E-11 score: 43.6
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	GENE3D	3.30.260.10		coord: 1..34 e-value: 8.2E-50 score: 171.6
IPR027410	TCP-1-like chaperonin intermediate domain superfamily	SUPERFAMILY	54849	GroEL-intermediate domain like	coord: 2..38
IPR027409	GroEL-like apical domain superfamily	GENE3D	3.50.7.10	GroEL	coord: 35..188 e-value: 8.2E-50 score: 171.6
IPR027409	GroEL-like apical domain superfamily	SUPERFAMILY	52029	GroEL apical domain-like	coord: 28..187
None	No IPR available	PANTHER	PTHR45633:SF3	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 1..187
None	No IPR available	PANTHER	PTHR45633	60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL	coord: 1..187

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig1422	contig	P-littoralis_Contig1422:21..587 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig1422.1.1	mRNA_P-littoralis_Contig1422.1.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig1422 21..1044 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig1422.1.1 ID=prot_P-littoralis_Contig1422.1.1|Name=mRNA_P-littoralis_Contig1422.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=189bp
MGKLIAEAFAKVGNEGVIDVQDSKDSTTYVDIVEGMEMESGFVTPYFVNT
NKQTSEFENPLIMVANKKLQRADKVMKVLAAVKDTNQPVVFIADEIVNEA
LSFLHVNVMKHKHPFVAVNAPSFGQDRKNYLLDLCTMTGATLISDDSGTD
YDHITIESLGVCEKIVVGQKKTTIVRGKGDQEKLRSNVK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002423	Cpn60/GroEL/TCP-1
IPR027410	TCP-1-like_intermed_sf
IPR027409	GroEL-like_apical_dom_sf