prot_P-littoralis_Contig142.138.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.138.1
Unique Nameprot_P-littoralis_Contig142.138.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length275
Homology
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BLAST of mRNA_P-littoralis_Contig142.138.1 vs. uniprot
Match: D8LTY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY9_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 4.250e-80
Identity = 151/250 (60.40%), Postives = 174/250 (69.60%), Query Frame = 0 
Query:   28 AALRGSGGDAPRDVASMKAEIAELQSGTTASLDRAIAAAQATGSIAAHTSTTLRDQRQQMGDIDAEARSIDGKLKQTGYNLKHGLTWRGALTSPFRRNKSKVTAAGGAR---GDISPVFKDDYTNNNDTSNQPTAPSHANNSXXXXXXXXXXXXXXXXLFKARAKAGAALAP--AAVETPKVPEHAPDGFETQLDTLDGLLDGLNLQAKAIGAELKQQNDGIEALGARVEPLRQETASQAKQIKRRFGVK 272
            AA RG    +PRDVASMKAEIAELQ+GTTASLDRAIAAA+AT S+ A T  TL++QR+QMG+IDAEAR+IDG LK+TG+NLK+GLTWRGALT+PFRR               GDISPVFKDD+  +        AP+H  ++                    R KAGAA A         K+PE+ P+GFETQLDTLD LLDGL +QAK IGAELKQQN+GIE LG RVEPLRQETA QAKQIKRRFGVK
Sbjct:   26 AASRGGDDSSPRDVASMKAEIAELQAGTTASLDRAIAAAEATASVGARTQVTLKEQREQMGEIDAEARAIDGTLKRTGHNLKYGLTWRGALTAPFRRKXXXXXXXXXXXITGGDISPVFKDDFRQSTPPGG---APAHGGSTSSTPSPKKGGRLKFG---SPRKKAGAARAEEIGTKAASKLPENVPEGFETQLDTLDSLLDGLTVQAKEIGAELKQQNEGIEVLGERVEPLRQETAFQAKQIKRRFGVK 269
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.138.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTY9_ECTSI4.250e-8060.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.110coord: 210..267
e-value: 6.4E-5
score: 25.1
NoneNo IPR availableGENE3D1.20.5.110coord: 35..111
e-value: 3.5E-9
score: 38.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..184
NoneNo IPR availablePANTHERPTHR19305SYNAPTOSOMAL ASSOCIATED PROTEINcoord: 17..267
NoneNo IPR availablePANTHERPTHR19305:SF9SYNAPTOSOMAL-ASSOCIATED PROTEIN 29coord: 17..267
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 40..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:420441..421265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.138.1mRNA_P-littoralis_Contig142.138.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 419394..421454 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.138.1 ID=prot_P-littoralis_Contig142.138.1|Name=mRNA_P-littoralis_Contig142.138.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=275bp
MASSPPDKQQQQQQLWSEKHKQTANGTAALRGSGGDAPRDVASMKAEIAE
LQSGTTASLDRAIAAAQATGSIAAHTSTTLRDQRQQMGDIDAEARSIDGK
LKQTGYNLKHGLTWRGALTSPFRRNKSKVTAAGGARGDISPVFKDDYTNN
NDTSNQPTAPSHANNSRSRSTGNRSTSPKKTSLFKARAKAGAALAPAAVE
TPKVPEHAPDGFETQLDTLDGLLDGLNLQAKAIGAELKQQNDGIEALGAR
VEPLRQETASQAKQIKRRFGVKSG*
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