mRNA_P-littoralis_Contig142.103.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig142.103.1
Unique Name	mRNA_P-littoralis_Contig142.103.1
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 2.450e-78
Identity = 139/186 (74.73%), Postives = 151/186 (81.18%), Query Frame = 1

Query:  646 SGFGLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLD-ATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK 1200
            +GFG+ASAWGVVSVV+IL NAVKRLAP+A+QPFSR                         GFQKKFSPLVVKRALTLD A A   A DG + RRRRAGPLRLLLAGPYSMGLFHATKKRKTVSW LTAGV+CLVQ+VKRLPYPWRSIVDAGVVVGLSYG+LSICVIWARA++GKAP+IDPALPEEK
Sbjct:  147 AGFGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEK 310

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A6H5KSH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH0_9PHAE)

HSP 1 Score: 226 bits (577), Expect = 1.500e-65
Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1

Query:  778 MYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRR-RAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK 1200
            MY  FSA+MAYAEGFKGFQ+KFSPLVVKRALTLD  A              RAGPLRLLLAGPYSMGLFHATKKRKTVSW LTAGV+CLVQ+VKRLPYPWRSIVDAGVVVGLSYG+LSICVIWARA++G+AP+IDPALPE+K
Sbjct:    1 MYAGFSAIMAYAEGFKGFQQKFSPLVVKRALTLDPAAXXXXXXXXXXXXXXRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAVLGRAPSIDPALPEKK 142

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA)

HSP 1 Score: 224 bits (570), Expect = 8.590e-63
Identity = 112/185 (60.54%), Postives = 135/185 (72.97%), Query Frame = 1

Query:  646 SGFGLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK 1200
            S FGLASAWGV+SV+ IL NAVKRLAP+A+QPF  GD T + W MY  F+ LMAYAEG+K FQKKFSP+VV+RALTLD               + AGPLRL+LAGPYSMGLFHA++KRK VSW L+  V+ LVQ V++LPYPWRSI+D GVV GLS+GS +I   W R+  G  P +D  LP E+
Sbjct:   94 SSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLD---------------KSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEE 263

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA)

HSP 1 Score: 215 bits (547), Expect = 3.660e-60
Identity = 105/185 (56.76%), Postives = 131/185 (70.81%), Query Frame = 1

Query:  646 SGFGLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK 1200
            S FG ASAWGV+SV+ ILA A++RL P+ALQPF  GD +   W +Y +F ALMAY EG K FQKKFSP+VV+RALTLD              R   GPLR++LAGPY MGLF+AT+KRK VSW L   V+ LV +V++LPYPWRSI+DAGVV GLS+G+ +I   W R+  G+AP +D  +PE K
Sbjct:   45 SSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQA------------RTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPESK 217

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU)

HSP 1 Score: 192 bits (487), Expect = 9.240e-52
Identity = 101/184 (54.89%), Postives = 123/184 (66.85%), Query Frame = 1

Query:  655 GLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLL---LAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEE 1197
            GL +AWGV   + ILA A+ RLAP+A+QP  + D T  QW +YG   A  AY EG+K FQ KFSPLVV+RA+TL                 R+ P  LL   LA  YSMGLFHA+KKRKTVSW ++ GV C++ LVKRLPYPWRS+VDAGV  GL +G  SI VI+ RAL GK+P +DP LP+E
Sbjct:   72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLST---------------RSPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKE 240

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA)

HSP 1 Score: 191 bits (484), Expect = 9.570e-51
Identity = 102/187 (54.55%), Postives = 129/187 (68.98%), Query Frame = 1

Query:  652 FGLASAWGVVSVVYILANAVKRLAPVALQPFSRGD----FTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK 1200
            F L++ WGVV VV +L+NA++RL P+AL+PF +      FT   W  Y  F+ +MAYAEG+KGFQ KFSPLVVKRALTL                 R+  L  +LA PYSMGLFHA+KKR+ VSW +  GV+ LV+ VK L +P+RSIVDAGVV GLS+G+LSI  I+A+AL G  P+IDPALP+ K
Sbjct:  116 FSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGP---------------RSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALPDVK 287

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA)

HSP 1 Score: 188 bits (477), Expect = 1.100e-50
Identity = 94/179 (52.51%), Postives = 121/179 (67.60%), Query Frame = 1

Query:  655 GLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALP 1191
            G+A AWGV   + ILA+A+KRLAP+A+QPF + D +  QW  YG    + AY EG+  FQKKFSPLVV+RA+TL               ++   P+ + LA  YSMGL HATKKRK VSW ++  V  +V +VKRLPYPWRSIVDAGV  GL++G++SI +I+ARAL G  P +DP LP
Sbjct:   55 GIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTL---------------KQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLP 218

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.260e-46
Identity = 85/181 (46.96%), Postives = 113/181 (62.43%), Query Frame = 1

Query:  655 GLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEE 1197
            G+A+ WGV+ V Y+L N ++RL P+A++PF RGDF    W  Y  F+  MAYAEG KGFQKKF P VV+RA  L  + +               PL  + A  + MGLFHA+KKRK +SW L  GV  ++Q+ KRL YPW +IVDAG VVGL +G +S+   + R+L G+ P+I   LP E
Sbjct:  104 GVAATWGVLGVFYVLLNGLRRLVPIAVEPFQRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLLKGSTN---------------PLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSE 269

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA)

HSP 1 Score: 176 bits (445), Expect = 2.670e-45
Identity = 93/180 (51.67%), Postives = 112/180 (62.22%), Query Frame = 1

Query:  658 LASAWGVVSVVYILANAVKRLAPVALQPF-SRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALM-GKAPAIDPALP 1191
            +AS WG + V+YILAN +KRL PVALQPF S GD +   WV Y  +   M Y EG+K FQ KF PLVV RA TL+       G G  W R    PL       YSMGLFHA+KKR  VSW    G+  +V  VKRLPYPWRSI+D GVV GLS+G+ SI  ++ R +  G+ P +DP LP
Sbjct:  125 IASTWGALGVMYILANPIKRLLPVALQPFASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLER--QDCRGPGW-WLRAALAPL-------YSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLP 294

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BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT)

HSP 1 Score: 171 bits (434), Expect = 6.500e-45
Identity = 92/177 (51.98%), Postives = 111/177 (62.71%), Query Frame = 1

Query:  661 ASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMYGAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSIVDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALP 1191
            AS WGVV V+ ILANA+ RLAP+A +PF  G      W  Y A  A  AY EG+K FQ KFSPLVV RA TL                 RA  LR +LA  YSMGLFHAT+KRK +SW ++  V+ +V +VKRLPYPWRSIVDAGVV GL++G  SI  I+ +A+ G  P +   LP
Sbjct:   52 ASHWGVVGVMAILANAIGRLAPIAAEPFRYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGG------------RATALRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig142.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LTY0_ECTSI	2.450e-78	74.73	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KSH0_9PHAE	1.500e-65	79.58	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CIU2_9STRA	8.590e-63	60.54	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZF77_9STRA	3.660e-60	56.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S3SW48_EMIHU	9.240e-52	54.89	Hypothetical protein n=2 Tax=Emiliania huxleyi Tax...	[more]
W7TVP9_9STRA	9.570e-51	54.55	Uncharacterized protein n=2 Tax=Monodopsidaceae Ta...	[more]
A0A0M0JX49_9EUKA	1.100e-50	52.51	Uncharacterized protein n=1 Tax=Chrysochromulina t...	[more]
A0A7R9U4X8_9STRA	2.260e-46	46.96	Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi...	[more]
A0A7S2WJT5_9STRA	2.670e-45	51.67	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A8J6CDI7_DIALT	6.500e-45	51.98	Uncharacterized protein n=2 Tax=Diacronema lutheri...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig142	contig	P-littoralis_Contig142:327952..335297 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Seed ortholog	2880.D8LTY0
Model size	3054
Max annot lvl	2759\|Eukaryota
Hectar predicted targeting category	signal peptide
Exons	3
Evalue	8.24e-86
EggNOG OGs	2BRVF@1\|root,2S1X8@2759\|Eukaryota
Ec32 ortholog description	conserved unknown protein
Ec32 ortholog	Ec-12_003930.1
Cds size	1020

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789668.0667927-UTR-P-littoralis_Contig142:327951..329802	1680789668.0667927-UTR-P-littoralis_Contig142:327951..329802	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig142 327952..329802 -
1680789668.1045628-UTR-P-littoralis_Contig142:335114..335297	1680789668.1045628-UTR-P-littoralis_Contig142:335114..335297	Pylaiella littoralis U1_48	UTR	P-littoralis_Contig142 335115..335297 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680789668.0759544-CDS-P-littoralis_Contig142:329802..330255	1680789668.0759544-CDS-P-littoralis_Contig142:329802..330255	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig142 329803..330255 -
1680789668.084106-CDS-P-littoralis_Contig142:330963..331328	1680789668.084106-CDS-P-littoralis_Contig142:330963..331328	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig142 330964..331328 -
1680789668.094317-CDS-P-littoralis_Contig142:334912..335114	1680789668.094317-CDS-P-littoralis_Contig142:334912..335114	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig142 334913..335114 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig142.103.1	prot_P-littoralis_Contig142.103.1	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig142 329803..335114 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig142:327952..335297-
coding sequence from alignment at P-littoralis_Contig142:327952..335297-

protein sequence of mRNA_P-littoralis_Contig142.103.1

>prot_P-littoralis_Contig142.103.1 ID=prot_P-littoralis_Contig142.103.1|Name=mRNA_P-littoralis_Contig142.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=340bp
MHTHAAAVLRVFCMTAAASATAVAAARSSGPRSPIDSSSSRVGSYASTSS
AFVGAAAAAVVSPAELVLRKPRCGAWSNCSPRRPASSLSMAFVPSPREQQ
QQQRSSSSPVSAAAVAAAAAPRRTVTAGDSINNKALFVSGGAGTTSPAAA
GGGGSGFGLASAWGVVSVVYILANAVKRLAPVALQPFSRGDFTTSQWVMY
GAFSALMAYAEGFKGFQKKFSPLVVKRALTLDATADSAAGDGSKWRRRRA
GPLRLLLAGPYSMGLFHATKKRKTVSWGLTAGVMCLVQLVKRLPYPWRSI
VDAGVVVGLSYGSLSICVIWARALMGKAPAIDPALPEEK*

mRNA from alignment at P-littoralis_Contig142:327952..335297-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig142.103.1 ID=mRNA_P-littoralis_Contig142.103.1|Name=mRNA_P-littoralis_Contig142.103.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7346bp|location=Sequence derived from alignment at P-littoralis_Contig142:327952..335297- (Pylaiella littoralis U1_48)
GGGGCCCAGCAGGGCAGATTTTGGGTATGCTTTCCAGATACTGAGCCCCT
ACTGGATGTCGGCCGAGGGTCCGAGCTGGTAAAACACTTTTCACAAGAGC
TCTGGGCTTCCGCAACCAGTGGCGGGTGAATTCTTCTGTGACACTGCAGC
CCTGCCCCGTACTATACCTGGTGCCTGTCCCCGATGCACACACACGCAGC
AGCAGTGCTTCGGGTCTTTTGCATGACCGCCGCCGCCTCCGCCACCGCGG
TCGCTGCTGCCAGAAGCAGCGGCCCTCGCTCGCCTATCGACAGCAGCAGC
AGCAGGGTCGGAAGCTACGCTTCCACCTCGTCAGCCTTTGTCGGAGCTGC
CGCAGCAGCGGTCGTGTCACCGGCGGAGCTTGTTCGTGAGTTCCTCACCT
GATATCAGAACGTTCAGCTCTTTTTGTACACTGCTGTATGGGTCGAGTGG
TCACAGGGTGTTGTGCGGTGTTCTTTGTTCGTGTCGGTTGGTCGTATATG
ATGTGCTACTACACAGAAAGTCGTGTTCTTTGGAAGTGTGCATTGCTCCA
CCACGATCTCTCTCTTAATCCAAAAGCCCGCATCAGACAGCACGGCAGTC
GGTTTGTGACACTGCTAGCTTCATCTTCGGCCGCCCCCGAATCATTGGTA
TTCTTTACGGAGGCGTTGATTACTGCTGTACATCTATGACCCGCATGTTG
CTTCACGATGTGTCCCTCATTAAAAACTTACAAAAACAAACCCCGCTGTC
TCAAATCTTGCCTCTTTGCCTCTTGTGAACACTGGGTACAAGTAGTGCTC
ATGATTCCCTACAGCAGTGCTGTAGAGGGCACGGCACTTGATGTCTGTCT
GATACTTCGTACTTTATGATATAATATGATGCAGCGGCATGCATTTTGCT
GCAGTTGAAATCATACTCGAGGTACGTTTCATTTTTGTATTATACTGCTA
CGAGTATTTGTACAAGTAGCAGGGCATGAGAGATTCACGATCGTGTCGGG
GAGAAGACGCACATACTACCCCGGTATCCTGGCACACTGCAACAGAACAA
AGCAGTGCCGGCCGGTTTCAAACCCAAGGTGGCGCGTGCCCCCCCTGCAC
TGATTTTCCATACAGATGATACAGCGGTACACACTTTCGTATGATAGCCT
CGATATCTCGATATGCAAGAGCATCTCTGCCGCAAGACAGCGGTGGCGCT
GTGTATACCGTGTGTTTTGTCATCCCATTTATTCTGGGCAGCAGCCTACA
CCTTTCGGTATGAAGTGGGTGAATCAGCCGGTGTCACACAGAAGGAAGGT
CACACACGAGCTCTCTTGTTTTTTATTTTAATTGAATGCCCACACGTTAG
AGCCCGTATTAACGGGGAATTGGAAAAAACGAAATACCGAAAAAGAAAAC
GAAAGAACTTCGTTCTTCTGTAAATAAAAAAAAGTAAAAGTTGTTGAGTA
TTAACCGAACGAGCATCCTTTTTTTTTTTTCACGCTGCTGCAGCGGACCT
GGTACCAGGGTGGAGAAGAAGAGAGGGGATACAACAGTACACCAGAGGAC
ACCGTTTGCGATGACTTTTGATATTTTTTGGATGGCTGATCGCTTGTTTC
CCGTCACGCTCGATACTCACCGACCCCAAACGTTGGGTGTTCCCGATGGA
CATTAGACCCATCTCTCTAGGCACGCATTTGGTAGGGAATTTCATCCGTT
TTCCGGCGAGATATCAGTGGAAACGTGAACTTGACTGCTTGCGAACTCAC
CCGAAACAGCGGCTCAAAGCAAAAGCGGGTCGTTGTGCACGAGTTGAAAA
CTTTTTTGGTGTCACGCTTGACATCCCACTGCCCCAAACCTTGGGCATTT
CCAATTCACTCCAAACCCACCTCTCTAGACATGCTAGCAGGGAATTTCGT
CGTTTGTGTCGCGAGTTATCAGTCGACATGTGAACTTGTCTGCTGTACAA
AAGTCTACCGGAGATGCCTCGCAGAGCTGAAGCGTCCCCGCCTACAAGCC
TAGGAGGCGGTATTTCGTTTTCGTTTTCGCAAAAAAAAAGGTCCAAAACA
CTTTATTTTCGCGAAGAAAAAAACGAAATACCGCCTGCTCGGTGTGTGCT
GAATCGGAGACACGCCTCTTTCAAAGAAAATAACGCCTCTTTCTCTCTTT
TCCTCGGACCAATCAGAGCCCAATTTCGTTTTCTTTCACGCAATTTCGTT
TTTTTCAATTCCCCGTTAATCCGGGCCTTTACTCCTGCGGTCGTTTTCAA
TGCGATGCGGGTACAGCAATCCCTTCCCTCTGTTTACTCGCGAGTAATTC
GATTTCCATTGACTTTTTATTTCATTTTGTGACGTGGCGCTGGACCAGGC
TCCCTATTCTTGTTGTATTTTTGTACAGCGTTGTGTGATTCCTCGGGGTC
CGTTTTTGTTTTGCCGGAGTTTCTTTGTCGTGCCTTTATTTGGTGGATTG
AGGGGATCTCCCGCGTACTATATAACTCTTTTGGGGCAAGCAGCCTGTGA
CCACAGAAATCGTACCTGATCGGTGGAGTACGGACATTAGAAGGTACTAA
GGAGAGATCGGAATGGTTTCTAATGTGAAGACAACAACAACGTAAAGCTG
CAAGATATGCTCTCAGAGAGAATCGAACCTACGACCTTACAACTAGTAGG
TTAACGAGGGAACAACTAGACCACCGGGGCGACCGGTGTACTTGGTGGTT
AACCTCGAAAACCTTGTTGCAGCACTTCGGTCGTGGGATAGATCGAATTT
CGGTCAAGTCACACCAACTTTTTGTTTTAGTCACGTCATACTTACCAGTC
TAAAGCGATGGGTTCGTTACTAACTAAACTCGACATCGAACGTTGACGAG
GGCAGGGGACTGTCGAAGCCCTCTTGCCGCGAACATAATCAGTTTAGTCT
ATCATACTCCGCACGAAGTATTTTCGTCACCGTGCTTCTGCTTGCCTTGA
TCTAAACTTGACTTCGAACGTTGATGAGGGCAGGGGACGGTCGAAGCCCT
CTCGCCGCAAACATCAAGGCCAGCAGAAGCACGGTGAAGAAAATACTTCG
TGCGAGAAGGAAAATAACTTCTGTGCTACCCTTCCTCCTATGTGACCCCG
CCTGATGCACCCGCACACGGTACACCGAGAGATGTAGACTGGCGTCCACA
CTAGATGGGAGACGCCAAACGCACGCACCGCCAACGCGTTGCCATACGTG
CGGGATTGGGGCCCCGATAACCGCGACGTGGGAATACTGCGATCAACCGG
TGCAGCTCGATGACTGTCCCGGAGCCACTCGCGGTAGTACGATCGTAGCT
CTAGCGATAAGGTGCACGTGCAGTCGCCCTACTCCACAGGCTGGTTCACT
CGAGACGATAGTAAATACATACAACATTTTCTCACGCGATTTTTTCGAGT
CAGAATCTAAATCTAACAGACTTGAGTCTACTATCGAATCGGCTCCTTTT
GGGCACTTTTGGCTACATGTAGCCAAACTACGTCAAACCGTGGATTTGAG
GAAATCAATTGTGGGCACTCACGTTGGGTCCCATTCGAACCATGCCTGAT
GATTTTTTTTATACTTCTCAAGGACATACAAGTACAATACCATTTACTCC
TGTAGAGTGAGAAGCCTGCTTTTAATTGATATCAGGGGGGTGATATACTG
CCTTATTCCGCGAAAGTGACACATTTTATCCCCTAGCACAATCGCCAGAG
CCTCAAACAAAAACCCAGCGATGTCTTGGTCTCCTGCTTTTGACGACGGT
CAGTTTGGCACCATATTTTTCGTGATCGGGTTTTTATTTCGTTTCGGACC
ACATTGTGTTGAATACGTCTTGCTGTTTTTGCGTAAACCAGCCTGTGCCA
TCTTCGAACCGTCGCTTACTTTCTCGAACTCTCTTTCCCACCCCCCTCCC
CCCGCTCTCTCTATTCCTCTCTTTCTCTCTCTGTGGGCTGTCGAAATGAC
GTTGCGTTTCTTTTTTCAGTGCGGAAACCCCGCTGTGGCGCTTGGTCCAA
CTGCTCCCCGCGGAGGCCCGCTTCCTCGCTGTCTATGGCGTTCGTGCCTT
CCCCCCGGGAACAGCAACAACAGCAACGGTCGTCTTCGTCGCCTGTTTCG
GCAGCAGCGGTAGCAGCAGCAGCAGCACCGAGAAGGACGGTGACGGCGGG
CGACAGCATCAACAACAAGGCGCTATTTGTCTCGGGGGGAGCGGGGACGA
CGTCACCCGCGGCGGCAGGCGGGGGGGGCTCGGGGTTCGGCTTGGCTAGC
GCGTGGGGGGTGGTGTCCGTGGTGTACATCCTGGCGAATGCCGTGAAGCG
CCTGGCGCCCGTCGCCTTGCAGCCGTTCTCGAGGGTGAGAGGAAAAGGAA
GAGGAGCAGAACACACACAATACACACGGGAAGAAACAACACTGGAGGGA
CGGAGGGGGGCGCGGTGATGTCCTACCGACTTTATCTGATCTGTCTGCAA
CGGCCTTGATATACGTAGCTTTGTTGCCGGATGGTTCTATTTGATACATG
GCTGCTGTGCAGAGCCGTAGGGGGTAGGGGGGTCGGTCTGCACCATGCAC
TAGGGCTCACACCCGACTTGCATCTACCCGGGCACCTGACCTCGGGTACT
CGGAAACGAGTAGCCCCACAGGGTACCCGGTTCCAATTTTTTGAGTCGGA
TGCGACCCTTAGTATCGCACCCGACTACCGGTATCTCCTACCCGGGTACC
TGACCTCGAGTACCCGGAACCTAGCAACCCCACCGGGTACCCGGTACCAA
TTTTTTAGTCGAGTGCGAGCCCTACCGTGCACCCCCGGGATTTTTTTCGC
CCCCACTCAAGTCAGCGACGCTACCGTTGTGTTCGCCCCCACTCGTACAT
ACACACCACCACAGCAGTGGAAAAACAGTCGCGAGTGCATCGTTCCGTTC
TATTCTACACATGCGGATCACGAGTCCGTGTGTGTGCTACCACATGCTTC
GGAATTTGCCACTCCTGTAATTGCCTCCCATTCTTCGTTACCTGCTCTCC
CGACGCGTCGAAAACTTCGAAAAACCTGCGAAACAAAATCAGGGAGACTT
CACCACTTCCCAGTGGGTCATGTACGGAGCGTTCTCGGCGCTCATGGCTT
ACGCGGAAGGGTTCAAGGGTTTCCAGAAGAAGTTTTCTCCGCTCGTGGTG
AAGCGCGCGCTGACCCTCGACGCCACCGCCGACTCAGCGGCGGGGGACGG
CAGCAAGTGGCGGCGACGGCGGGCGGGCCCGTTGAGGCTCCTCCTGGCCG
GCCCCTACAGCATGGGCCTCTTCCACGCCACCAAGAAGAGGAAGACCGTG
AGCTGGGGGCTCACCGCGGGGGTGATGTGCCTGGTGCAGCTGGTGAAGCG
GCTGCCGTACCCGTGGAGGTCCATCGTGGACGCGGGCGTGGTCGTGGGGC
TCTCGTACGGGTCGCTCTCCATCTGCGTGATCTGGGCGCGGGCGCTCATG
GGGAAGGCGCCCGCGATCGACCCGGCACTGCCCGAGGAAAAGTAGGGGTG
GATGATGATGCTGAAAGCCCGACAGGAGGGCTGGGCTGTCTTTTTACGCC
ATCATACATGATACATGTGTACGAGGAAGAGTGGTATCGTGCAGCAAGAG
GGCTTGGCCTAGGAGCGCTGTATTGTTCGTCGTATATACTTCGTACGTTT
TTTTTTTTTTTCGTGAGCTGTCTCTCGGTTTTTGTCTTGATTGTTTTTTA
TTGGAAAAGGGTGCTGTGTAGCTGTTTGCTGTCAGGTACTCGTGCGAAGT
AATGAAATTATTATCTTGGGTCCGTTTTGACGGGTGTGCATTTTTTGTTG
CTGTACCTCTTGGTGCTTTTTGCTTGTGGTTCGTCTTTTTTTTTGAAGAC
ACGTGATGCAGGAGGAGTGAGCGCGCAAAAATGCTTGTCAAACGGAAACA
AAAAGCAGCAGAGTGGAGCCGCTTTTGTTTTGGGACAGCGTGGTGCCTCT
CTTTTGGTGGTGTAACCCTTGGGGAAACTGTCTGTATCCTTAATGGCGAA
CGAGTGGGTTGGCACCGAAGATTCATTACCTTGAGTTACTGCTCAATTTT
GGAGAACGAGAACTTTGATCGTCCGGGCACTGACAGCGGGGTTTATTCGT
GTGGTTGGTGTGGCACACTGCTGTAGCTTTAGCAGCAAGCAGTGTTGCCG
TGTGGGAAAGCGGACAGCACACAGGCGGTGGGGGTGTACTAAAGTCTTCG
GGCACGCCAAGGTCGCTTCACGAGTGTAACCGAAGACGGGTCAAAAGAAG
TGTGATTTTTTTATCTCGGACGTGTAATCTCAACTCTCGCCGAAAAGCAA
CTCAAAAGCTTTCTGCTGTGTATATTACCATGAAAGAGGAGGGTTGTGAT
GATACCAAAATCAAGACCAGTACCAAGCGTGTGTGTGTGTGTCATCTTCC
CAATTATTCTGGGCACCAGTCTACACCTTTCGGTATGGGGTCGGTGCATC
AGCCGGGGTCCCACAGAAGGAAGGTCACACACGAGCTTTTTTTGTTTTTT
ATTTTGTTTTTTTGCCCACACCTTCCTCCTGCCGTACGTGCCTTTGGTTT
TTTATGCGAGTCGGGTACAGCAATCCCTTCCTTCTGTTTCCTCACGAGTA
ATTCGCTTTCCACTGAGTGTCGCACGAAACGCGCTCAGAAAGAATCGAAC
CCGCGACCTTACAACTAGTATGTTAACGAGGGAACCACACCGGGGCGACC
TTGACCGAGAGTGAAAGGAAAAAAAAAATGGTGCGAACTTTGGTGCAAGC
GCATCACGCCATGCACATACATCCGGACGAGAAACAGACATGGAGGGGCG
TTGTTCCTGAGCATCGTGCGGCTTTTCAGTTTTTTTTATGCGATTGCCGG
CCTGGTACTGCTGTACTCGTGCTATCGCATCCTGTTCGTTTAGTTACCCA
TCAAACATCTCTGAAGCGAGAACGGCACGCATGTGTTGTGTGTTTATTTC
ATTTATGTTTGACGCCGGTCTCCACTTTTCGGTGTAGGTGGGCGCCTCTG
TCGGCGGTCACACGGAAGTACGTGCGTGGCTCCGTCGATGAGGGCGTGTG
CTCTTGTTAGTGTCATAGCTTCTTTTTGCGATGTTTGCCGAGACGGTTTG
TCCCGCGCCCCACAAGTTGTGATGCCGGCGCCGCTGCTTTTCTTTTCTTT
TTTGTCAGGGGCGCTCGGGAGAAGAAGAGGAAGTAATTCTCTCTCTCTCT
CTCTCTCTCTGTGTGTGTGTTGTCATCCCATATTCTCTGGCACACTAGTC
TGCACCCTGCGGTTCAAACTACAGGCTAGGCCCATCGACGGGGTCACACA
GGAGGAAGGTCAACACAGGAGGAGTTACCCCCACCTTCCTTCTGCG

Coding sequence (CDS) from alignment at P-littoralis_Contig142:327952..335297-

>mRNA_P-littoralis_Contig142.103.1 ID=mRNA_P-littoralis_Contig142.103.1|Name=mRNA_P-littoralis_Contig142.103.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1020bp|location=Sequence derived from alignment at P-littoralis_Contig142:327952..335297- (Pylaiella littoralis U1_48)
ATGCACACACACGCAGCAGCAGTGCTTCGGGTCTTTTGCATGACCGCCGC
CGCCTCCGCCACCGCGGTCGCTGCTGCCAGAAGCAGCGGCCCTCGCTCGC
CTATCGACAGCAGCAGCAGCAGGGTCGGAAGCTACGCTTCCACCTCGTCA
GCCTTTGTCGGAGCTGCCGCAGCAGCGGTCGTGTCACCGGCGGAGCTTGT
TCTGCGGAAACCCCGCTGTGGCGCTTGGTCCAACTGCTCCCCGCGGAGGC
CCGCTTCCTCGCTGTCTATGGCGTTCGTGCCTTCCCCCCGGGAACAGCAA
CAACAGCAACGGTCGTCTTCGTCGCCTGTTTCGGCAGCAGCGGTAGCAGC
AGCAGCAGCACCGAGAAGGACGGTGACGGCGGGCGACAGCATCAACAACA
AGGCGCTATTTGTCTCGGGGGGAGCGGGGACGACGTCACCCGCGGCGGCA
GGCGGGGGGGGCTCGGGGTTCGGCTTGGCTAGCGCGTGGGGGGTGGTGTC
CGTGGTGTACATCCTGGCGAATGCCGTGAAGCGCCTGGCGCCCGTCGCCT
TGCAGCCGTTCTCGAGGGGAGACTTCACCACTTCCCAGTGGGTCATGTAC
GGAGCGTTCTCGGCGCTCATGGCTTACGCGGAAGGGTTCAAGGGTTTCCA
GAAGAAGTTTTCTCCGCTCGTGGTGAAGCGCGCGCTGACCCTCGACGCCA
CCGCCGACTCAGCGGCGGGGGACGGCAGCAAGTGGCGGCGACGGCGGGCG
GGCCCGTTGAGGCTCCTCCTGGCCGGCCCCTACAGCATGGGCCTCTTCCA
CGCCACCAAGAAGAGGAAGACCGTGAGCTGGGGGCTCACCGCGGGGGTGA
TGTGCCTGGTGCAGCTGGTGAAGCGGCTGCCGTACCCGTGGAGGTCCATC
GTGGACGCGGGCGTGGTCGTGGGGCTCTCGTACGGGTCGCTCTCCATCTG
CGTGATCTGGGCGCGGGCGCTCATGGGGAAGGCGCCCGCGATCGACCCGG
CACTGCCCGAGGAAAAGTAG