prot_P-littoralis_Contig142.94.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.94.1
Unique Nameprot_P-littoralis_Contig142.94.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length156
Homology
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BLAST of mRNA_P-littoralis_Contig142.94.1 vs. uniprot
Match: D8LTX1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTX1_ECTSI)

HSP 1 Score: 135 bits (341), Expect = 5.190e-38
Identity = 96/153 (62.75%), Postives = 107/153 (69.93%), Query Frame = 0 
Query:    1 MSSKIAKRMMSRVEDMVSRASSATKGADLPTSKRKAAKRALLQAPLKRKRS-SNAGATKSGRSVSKNTARNKTGRKPAGLLEQARRELRGKSRVARNVSLLSYNSGXXXXXXXXXXXXXXXXXXXXXXXXVVSKSRKAVEHLLQRDTKKRGGR 152
            MSSKIAKRMMSRV++MVSRASSATK  DL TSK+KAAKRALLQAP KRK S S + AT S RSV+K +ARNK GR+  GLL++ARRELRGKS VARNVSLLSY+S                         V SKSRKAVEHLL  D +K  GR
Sbjct:    1 MSSKIAKRMMSRVDEMVSRASSATKRTDLSTSKKKAAKRALLQAPSKRKGSGSTSVATSSSRSVTKKSARNKAGRRTMGLLDKARRELRGKSLVARNVSLLSYSS----RGEGRAAGAGADSGAAKVGGGVASKSRKAVEHLLLLDARKAAGR 149
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.94.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTX1_ECTSI5.190e-3862.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 96..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:260138..263905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.94.1mRNA_P-littoralis_Contig142.94.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 259684..264131 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.94.1 ID=prot_P-littoralis_Contig142.94.1|Name=mRNA_P-littoralis_Contig142.94.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp
MSSKIAKRMMSRVEDMVSRASSATKGADLPTSKRKAAKRALLQAPLKRKR
SSNAGATKSGRSVSKNTARNKTGRKPAGLLEQARRELRGKSRVARNVSLL
SYNSGGGGQATGAGGVSGGVAKAGGGGGGVVSKSRKAVEHLLQRDTKKRG
GRIAS*
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