prot_P-littoralis_Contig142.91.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.91.1
Unique Nameprot_P-littoralis_Contig142.91.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length229
Homology
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BLAST of mRNA_P-littoralis_Contig142.91.1 vs. uniprot
Match: D8LTX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX0_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 4.130e-47
Identity = 109/196 (55.61%), Postives = 124/196 (63.27%), Query Frame = 0 
Query:    5 GDEAMVSVAPLLRKRAYDAVVEGLNQARRLYTDAGQQGLEGLKRTRDPLGLVKAAAMRDGQRLKGEAVSV---LRER--DVGGSSKLCEQAQSCFSFVDREGLADATADVYAAIHMVTRLASGDTVVAAAEAALGDGASGKATQLLREAKYFYHHAQLSYEELVGQVTTLLEESPHDLDVARKAMQLQDNINRIYD 195
            GD  +       R+R ++A    + +A   Y  AG +           +G + A  M    R     VS+   L +R  DV  S  LCEQAQSCFSFVDRE LADATADVYAAIHMVTRLASGD  VAAAEAA  +GAS  A Q LREAK FYH AQLSYE+LV QVTTLLEE P DL+ AR AM+LQDNIN IYD
Sbjct:  667 GDGGVXXXXXXXRERDFEAARAAVKEAEENYETAGNE-----------MGALVARRMEMSLRGDEAMVSIDTLLEKRGGDVEASRTLCEQAQSCFSFVDREALADATADVYAAIHMVTRLASGDAAVAAAEAAFAEGASDNAAQFLREAKSFYHRAQLSYEDLVDQVTTLLEERPGDLEAARNAMELQDNINAIYD 851
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BLAST of mRNA_P-littoralis_Contig142.91.1 vs. uniprot
Match: A0A6H5KCJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCJ1_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 8.960e-27
Identity = 63/83 (75.90%), Postives = 67/83 (80.72%), Query Frame = 0 
Query:  113 IHMVTRLASGDTVVAAAEAALGDGASGKATQLLREAKYFYHHAQLSYEELVGQVTTLLEESPHDLDVARKAMQLQDNINRIYD 195
            IHMVTRLASGD  VAAAEAA  DGAS KA Q LREAK  YH AQL+YE+LV QVTTLLEE P DL+ AR AM+LQDNIN IYD
Sbjct:    3 IHMVTRLASGDAAVAAAEAAFADGASDKAAQFLREAKSSYHRAQLAYEDLVDQVTTLLEERPGDLEAARNAMELQDNINAIYD 85
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.91.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTX0_ECTSI4.130e-4755.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KCJ1_9PHAE8.960e-2775.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:247102..251151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.91.1mRNA_P-littoralis_Contig142.91.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 246893..251296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.91.1 ID=prot_P-littoralis_Contig142.91.1|Name=mRNA_P-littoralis_Contig142.91.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MSLRGDEAMVSVAPLLRKRAYDAVVEGLNQARRLYTDAGQQGLEGLKRTR
DPLGLVKAAAMRDGQRLKGEAVSVLRERDVGGSSKLCEQAQSCFSFVDRE
GLADATADVYAAIHMVTRLASGDTVVAAAEAALGDGASGKATQLLREAKY
FYHHAQLSYEELVGQVTTLLEESPHDLDVARKAMQLQDNINRIYDRWSTM
NSLMTPARCSPLQRLCTSAPRTRLAFQR*
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