prot_P-littoralis_Contig142.89.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig142.89.1
Unique Nameprot_P-littoralis_Contig142.89.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length188
Homology
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BLAST of mRNA_P-littoralis_Contig142.89.1 vs. uniprot
Match: D8LTX0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTX0_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 9.100e-15
Identity = 45/55 (81.82%), Postives = 48/55 (87.27%), Query Frame = 0 
Query:  134 LLASARAEFRAAGDLSGAFEADEALIKIKADMVMQAIEAARKSRNYDRLQELMFE 188
            LL SARAEFRAAGD SGA E DE LIKIKAD VM+A+E ARKSR+YDRLQELMFE
Sbjct:    8 LLESARAEFRAAGDASGASEVDETLIKIKADFVMEAMEMARKSRDYDRLQELMFE 62
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BLAST of mRNA_P-littoralis_Contig142.89.1 vs. uniprot
Match: A0A6H5K7F2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F2_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 3.820e-14
Identity = 45/62 (72.58%), Postives = 52/62 (83.87%), Query Frame = 0 
Query:  115 LLSQVSRVLHRRDLSTTARLLASARAEFRAAGDLSGAFEADEALIKIKADMVMQAIEAARKS 176
            L++  SRVLHR DLSTT++LL SARAEFRAAGD SGA E DE LIKIKAD VM+A+E ARK+
Sbjct:    4 LIAIQSRVLHRLDLSTTSQLLESARAEFRAAGDASGASEVDETLIKIKADFVMEAMEMARKA 65
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig142.89.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTX0_ECTSI9.100e-1581.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7F2_9PHAE3.820e-1472.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig142contigP-littoralis_Contig142:226102..239160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig142.89.1mRNA_P-littoralis_Contig142.89.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig142 226102..239160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig142.89.1 ID=prot_P-littoralis_Contig142.89.1|Name=mRNA_P-littoralis_Contig142.89.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=188bp
GTPLQRGNTTSSVGRPKCRTAGHGARDLATASRKEKRSVTCGGTTLAPGK
ADREEQQSKTRGRSGSSRNNREPWTGPLDIGDGGVPKVPDPITIEREELR
RTKARRLAAVRGHCLLSQVSRVLHRRDLSTTARLLASARAEFRAAGDLSG
AFEADEALIKIKADMVMQAIEAARKSRNYDRLQELMFE
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