mRNA_P-littoralis_Contig1410.9.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE) HSP 1 Score: 590 bits (1522), Expect = 1.950e-197 Identity = 335/577 (58.06%), Postives = 405/577 (70.19%), Query Frame = 1
Query: 319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDT------DDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAY--RGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPA-EGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPAR-QGEMVGEMERYAPAASMRNLSRQHWRFIQAGEVSRDYLRFLWR-RDMKLGPVS-RKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACS 2013
+RA QMFLTP ALFVLVVDMFAY DGHSREDALEQWLDILQ+RVPGSVVL++GTH D F+S AECSKRV+ F+K + IM+RIG +C +A D G+Q NRR++PLRVVV KELLALNL+ S G TT +LR IE VAY GYSFPSVN+ VP HLLAVATLEAVRRG LRGSGGE AEV +RL G EG PFV EALS F+E+ E+ MF G+ TE R FL AI+LHE QGAILLT+ADGGG + + EE L IH+NPAWFADL+RR+VD+RLLDPA+ + E V ++ + P AS+ +LS+QH RF AGE++R Y+RFLW+ RD++LGP S APPLEMSEE +T +V SLLDVRFMF+VR + D Y+V SCLPD+VGC +DP++++EL+ GGAIFS L+ VGA +VP GL+PR LAWCG+GD R+ ACWK+GVCF+FK +HLVLLYE RD G R+VIECHA GSA +EKA L DVVTEL +L+ D KYGFPGVGL +K+ S
Sbjct: 118 QRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAAA-----------DRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMF------GGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMAS--EEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNE-----DHYIVPSCLPDHVGCD---------------MDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK-EHLVLLYEHRDAG-RAVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSS 653
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE) HSP 1 Score: 595 bits (1533), Expect = 4.020e-196 Identity = 328/570 (57.54%), Postives = 396/570 (69.47%), Query Frame = 1
Query: 319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAY--RGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMRNLSRQHWRFIQAGEVSRDYLRFLWR-RDMKLGPVSRK--APPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACS 2013
+RA QMFLTP ALFVLVVD+FAY DGHSREDALEQWLDILQ+RVPGSVVL+VGTH D F+S A+CSKR DIM+R+GR+C SA RA+Q+ + D G+Q +RR+QPLR+VV ELLALNL S G TT QL+ E VAY GYSFPSVNS VP HLLAVATLEAVRRGA LRGSGG+ AEV +RL EG+PF+ EALSLF+E+ E+S+F G TE ++AFL AI LHE QGAIL+T+ADGGG ++ E+ L IHVNPAWFADL+RR+VD+RLLDPA+Q ++ ++R +PA S+ LS+QH RF AGEVS+ Y++FLW+ RD++LGP S APP EMSEE +T MV SLL VRFMF+VR + D Y+V SCLPD+VGC VD +++L L GGAIFS +L+L G + VP GL+PR LAWC +GD R+ CWK+GVCFAF KHLVLLYE R RSVIECHA GSA NEKA G L DVV EL RL+ D KYGFPG+ L + + A S
Sbjct: 290 QRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKR---------DIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLF------GGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPA-SVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNK-----DHYIVPSCLPDHVGCT---------------VDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATS 823
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI) HSP 1 Score: 553 bits (1425), Expect = 1.650e-179 Identity = 312/579 (53.89%), Postives = 395/579 (68.22%), Query Frame = 1
Query: 319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRF-NSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRG--GYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMR-NLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGS-ADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACSDDD 2022
+RA QMFLTP ALFVLVVDMF Y +G SREDALEQWL+ILQ+RVPGSVVL+VGTH D F + AEC++R + F KD ++IM R+ +C SA+ R + +L + + T L+ N R+QPLRVV+++ELLAL+L SS G L+ +E +AY G GYSFPSV S+VP +L A+ATLEAVRRGADLRGSG V QRL +GDP + R FVR SEA+SLF + + SMF ++ + + E +R FL A++ HEA GAILLT DGGGG + + +L IHVNP+ FADLVRRVVD+RL+DP +Q ++ ME M L+ QH RF++AGEVS+DYL+FLW RDM LG S++APPLEMSE V MVGSLLDVRFM++VRD +PDRYVV+SCLP+ G VDP ++LELK G AI+S +LKLVGA AVP GLVPR LAWCGRG+GR+KACWK+GVCFAFK HLVLLYE R S IECHARG+ +D++ A L D+ ++ L+ D+KYGFPG+GL+ + + SD D
Sbjct: 425 QRAYYDTHQMFLTPGALFVLVVDMFTYT-EGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELG---EGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTK--QKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLN---------------VDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFKN-HLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVRSGESEETVISSDSD 981
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE) HSP 1 Score: 528 bits (1359), Expect = 9.680e-173 Identity = 305/584 (52.23%), Postives = 384/584 (65.75%), Query Frame = 1
Query: 319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQA-ECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRG--GYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIA---------------------GQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMR-NLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLL 1977
+RA QMFLT ALFVLVVDMFAY A+GHS EDA+EQWLDILQ+RVPG+V+L+VGTH D F A EC+KR + F KD + IM+RI C SA+ A+ +L E L+ N ++PLRVV+E++LL L+L SS G L+ +E +AY G GYSF SV S+VP +L +ATLEAVR GADLRGSGG V QRL +GDP + R FVR SEA+SL + E+S ++ +A G+ E +R FL AI+ HEA GAILLT+ DGGG + + +L IHVNP+ FADLVRRVVD+RL+DP +Q ++ M M L+ QH RF++AGEVS+DYL+FLW RDM+LG S +APPLEMSE V MVGSLLDVRFM++VRD + +PDRYVV+SCLP+ G P+ VDP +MLELK G A++S +LKLVGA AVP GLVPR LAWCGRG+G +KACWK+GVCFAFK H+VLLYE RD S IECHARGS +E A L+D+ +++ L+ D KYGFPG+GL+
Sbjct: 130 QRAYYDTHQMFLTQGALFVLVVDMFAY-AEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETEL----GERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRK-QQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAG----------PE-----VDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFKN-HMVLLYEVRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGLI 691
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE) HSP 1 Score: 418 bits (1075), Expect = 9.040e-131 Identity = 268/595 (45.04%), Postives = 343/595 (57.65%), Query Frame = 1
Query: 319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQA-ECSKRVEGFLK-------------------DTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPA-ASMRNLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACSDDD 2022
+RA QMFLTP ALFVLVVDMF Y G S+EDALEQWL+ILQ+RVPGS++L+VGTH D F + A EC++R + F + D DDIM R+ +C SA+ RA+ +L + + T L+ N R+QPLRVV+E++LLALNLASS L+ +E +AY G GADLRGSG V QRL +G+P + R FVR SEA+SLF E SM W++ + E +R FL A++ HEA GAI LT DGGGG + + +L IHVNP+ FADLVRRVVD+RL+ P +Q ++ ME +S+ L+ QH RFI+ GEVS+DYL+FLW RDM L S++APPLEMSE V MV SLLDVRFM++VRD +PDRYVV+SCLP+ G PD VDP ++LELK G AI+S +LKLV AVP GLVPR L+ C HLVLLYE R S IECHARG+ +E A L D+ ++D L+ D+K FPG+GL+ + + SD D
Sbjct: 170 QRAYYDTHQMFLTPGALFVLVVDMFTYEV-GQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELG---EGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG---------------------------GADLRGSGSTREAVAQRLREGNPKKRRSFVRFSEAVSLFAA-QQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAG----------PD-----VDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS-----------------C------HLVLLYEVRATDGTSWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGLGLVRSGESEETVVYSDSD 694
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE) HSP 1 Score: 210 bits (535), Expect = 1.480e-57 Identity = 126/264 (47.73%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 1054 EKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAAS--MRNLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGG 1839
E +R FL AI+ E GAILLT DG +L IHVN + FADL++ V E P+ + L+ QH RF++AGEVS+DYL+FLW RDM+LG S++AP LEMSE V MV S LD+R +++VRD +PDR VV+SCLP+ G P+ VDP +LEL+ AI+ +LKLV A AVP GLVPR LAWCGRG+GR+ ACWK+GVCFAFK HL+LL E R GG
Sbjct: 23 EPRRIFLAAIKSQETHGAILLTGVDGA------------DLIIHVNLSRFADLLK----------------VKEAMEACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAG----------PE-----VDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELAWCGRGEGRINACWKRGVCFAFKN-HLMLLNEVRAGG 242
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE) HSP 1 Score: 125 bits (314), Expect = 3.280e-28 Identity = 77/163 (47.24%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1486 MFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGL 1974
M++VRD + +PDRYVV C P+ D R VDP G IF LKLVGA AVP GLVPR LAWCGRG+GR K C K+G+ K KHLVLL E R S IEC RG+ +E VL D ++ L DNKYGFPG+GL
Sbjct: 1 MYRVRDGHHAFVPDRYVVHYCFPNT-------------DGRR--VDP---------GKIFQT-LKLVGAHAVPPGLVPRLLAWCGRGEGRYKECCKRGLLLEIK-KHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGL 137
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI) HSP 1 Score: 59.7 bits (143), Expect = 2.110e-5 Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 343 QMFLTPDALFVLVVDMFAYVADGHSR-----EDALEQWLDILQSRVPGSVVLVVGTHGDRF 510
Q+FLT ALF+LVVD+F D S A+ +WL IL RVPG+VV +VGTHGD+F
Sbjct: 491 QIFLTEGALFLLVVDLFELGRDEKSAGIPDPRGAIYRWLVILHERVPGAVVALVGTHGDKF 551
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6P4YCW7_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YCW7_BRABE) HSP 1 Score: 58.2 bits (139), Expect = 6.060e-5 Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1
Query: 343 QMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDL----VRDRDENQTGLQANRRHQPLRVVVEKE--LLALNLASSRGGTTG--QLRGAIERVAYRGGYSFPSVNSIVPTT 834
Q FLTPDA ++L+V++ Y A+ WLD L +RVPG+VV +VG+ D S+AE SK+++ DI ER + + ++ ++ + R+ + + R+ + R ++ + L+ SS T+G LR I A G FP++ I+P T
Sbjct: 503 QFFLTPDAFYLLLVNLQTYSCSEERYRKAVGFWLDTLTARVPGAVVTIVGSKMDMC-SEAEMSKKIK-------DIEERFQQQIDTCKSNTERQIKKLNTREAKSKEEKWEIERKLERARSLLSNQMRLIGTYCLSSAEPTSGLDTLRNHILESASDTGL-FPTLKKILPRT 665
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6P4YQC6_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YQC6_BRABE) HSP 1 Score: 57.8 bits (138), Expect = 6.940e-5 Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 1
Query: 343 QMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVE-----------GFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRGGYSFPSVNSIVPTTHLLAVATLEAVRRGADL 885
Q+FLT +L +L VD+ +Y + S ++ +W+DIL++RVPG+ VL+ GTH D+ E + E ++KD D M +I ++ SA + + T L+ + + +PL+ ++ L+ A G LR I RV +FP + ++P T LE++R+ L
Sbjct: 248 QLFLTKGSLHILTVDLASYRRE--SFPASVGKWVDILRARVPGTHVLLAGTHVDQIRDAEEMRMKCEDIENQIDLMQQNYVKDLDRQMRKIKKELQSAREESSDSSQNGYAKRLTELE-DLKSKPLKF---SQVFPLSSAEGLEGVEA-LRAEILRVL-EDTSAFPDLRRVLPKTWADLETRLESLRKDESL 431 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1410.9.1 >prot_P-littoralis_Contig1410.9.1 ID=prot_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=589bp MFFRALGRTQARCGRERVLMVRRADLPVAQMFLTPDALFVLVVDMFAYVAback to top mRNA from alignment at P-littoralis_Contig1410:17917..20315+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1410.9.1 ID=mRNA_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2399bp|location=Sequence derived from alignment at P-littoralis_Contig1410:17917..20315+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1410:17917..20315+ >mRNA_P-littoralis_Contig1410.9.1 ID=mRNA_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1767bp|location=Sequence derived from alignment at P-littoralis_Contig1410:17917..20315+ (Pylaiella littoralis U1_48)back to top |