mRNA_P-littoralis_Contig1410.9.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1410.9.1
Unique NamemRNA_P-littoralis_Contig1410.9.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 590 bits (1522), Expect = 1.950e-197
Identity = 335/577 (58.06%), Postives = 405/577 (70.19%), Query Frame = 1
Query:  319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDT------DDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAY--RGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPA-EGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPAR-QGEMVGEMERYAPAASMRNLSRQHWRFIQAGEVSRDYLRFLWR-RDMKLGPVS-RKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACS 2013
            +RA     QMFLTP ALFVLVVDMFAY  DGHSREDALEQWLDILQ+RVPGSVVL++GTH D F+S AECSKRV+ F+K        + IM+RIG +C +A            D    G+Q NRR++PLRVVV KELLALNL+ S G TT +LR  IE VAY    GYSFPSVN+ VP  HLLAVATLEAVRRG  LRGSGGE AEV +RL  G    EG PFV   EALS F+E+  E+ MF       G+ TE  R FL AI+LHE QGAILLT+ADGGG  +   +  EE L IH+NPAWFADL+RR+VD+RLLDPA+ + E V ++ +  P AS+ +LS+QH RF  AGE++R Y+RFLW+ RD++LGP S   APPLEMSEE +T +V SLLDVRFMF+VR +      D Y+V SCLPD+VGC                +DP++++EL+ GGAIFS  L+ VGA +VP GL+PR LAWCG+GD R+ ACWK+GVCF+FK +HLVLLYE RD G R+VIECHA GSA +EKA   L DVVTEL +L+ D KYGFPGVGL      +K+   S
Sbjct:  118 QRAYYDTHQMFLTPGALFVLVVDMFAYSEDGHSREDALEQWLDILQARVPGSVVLLMGTHSDSFDSPAECSKRVDCFVKGELLPLYKNFIMKRIGDECKAAA-----------DRGHAGVQDNRRYEPLRVVVVKELLALNLSPSGGVTTAELREHIEGVAYGVHDGYSFPSVNNEVPEPHLLAVATLEAVRRGVSLRGSGGEPAEVARRLNAGTKVGEGHPFVLFPEALSRFLEVAGEKPMF------GGKATEGARVFLAAIKLHEVQGAILLTRADGGGEMEDMAS--EEHLVIHMNPAWFADLIRRIVDVRLLDPAQARQEKVADLIKRQPPASVGDLSKQHHRFFLAGELNRRYMRFLWKDRDLELGPASPNTAPPLEMSEEDITTIVESLLDVRFMFRVRQNE-----DHYIVPSCLPDHVGCD---------------MDPKKLMELEVGGAIFSRRLEFVGAHSVPPGLIPRLLAWCGQGDERITACWKRGVCFSFK-EHLVLLYEHRDAG-RAVIECHAMGSAHDEKAWRTLEDVVTELGQLVGDAKYGFPGVGLFFVGGGDKQKVSS 653          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 595 bits (1533), Expect = 4.020e-196
Identity = 328/570 (57.54%), Postives = 396/570 (69.47%), Query Frame = 1
Query:  319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAY--RGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMRNLSRQHWRFIQAGEVSRDYLRFLWR-RDMKLGPVSRK--APPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACS 2013
            +RA     QMFLTP ALFVLVVD+FAY  DGHSREDALEQWLDILQ+RVPGSVVL+VGTH D F+S A+CSKR         DIM+R+GR+C SA  RA+Q+   + D    G+Q +RR+QPLR+VV  ELLALNL  S G TT QL+   E VAY    GYSFPSVNS VP  HLLAVATLEAVRRGA LRGSGG+ AEV +RL      EG+PF+   EALSLF+E+  E+S+F       G  TE ++AFL AI LHE QGAIL+T+ADGGG ++      E+ L IHVNPAWFADL+RR+VD+RLLDPA+Q ++   ++R +PA S+  LS+QH RF  AGEVS+ Y++FLW+ RD++LGP S    APP EMSEE +T MV SLL VRFMF+VR +      D Y+V SCLPD+VGC                VD +++L L  GGAIFS +L+L G + VP GL+PR LAWC +GD R+  CWK+GVCFAF  KHLVLLYE R    RSVIECHA GSA NEKA G L DVV EL RL+ D KYGFPG+ L     +  + A S
Sbjct:  290 QRAYYDTHQMFLTPGALFVLVVDIFAYSEDGHSREDALEQWLDILQARVPGSVVLLVGTHSDMFDSPADCSKR---------DIMDRVGRECKSARERARQESAGNSDREYAGVQDSRRYQPLRIVVVDELLALNLTPSGGVTTAQLQEHFEGVAYGVHDGYSFPSVNSEVPEPHLLAVATLEAVRRGATLRGSGGDPAEVVRRLDGEKLDEGQPFILFPEALSLFLEVAGEKSLF------GGNATEGEQAFLAAITLHERQGAILVTRADGGGEKEDMKPASEQHLVIHVNPAWFADLIRRIVDVRLLDPAQQEKLAEVIKRQSPA-SVAELSKQHGRFFLAGEVSKRYMKFLWKERDLELGPASPSLAAPPFEMSEETITTMVESLLAVRFMFRVRHNK-----DHYIVPSCLPDHVGCT---------------VDAKKLLGLDVGGAIFSRKLQLGGEQPVPPGLIPRLLAWCSQGDARITTCWKRGVCFAFNRKHLVLLYEHRKEAGRSVIECHAMGSAHNEKAGGTLDDVVAELRRLVGDPKYGFPGIWLFFDGGVEHQKATS 823          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: D7FU35_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU35_ECTSI)

HSP 1 Score: 553 bits (1425), Expect = 1.650e-179
Identity = 312/579 (53.89%), Postives = 395/579 (68.22%), Query Frame = 1
Query:  319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRF-NSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRG--GYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMR-NLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGS-ADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACSDDD 2022
            +RA     QMFLTP ALFVLVVDMF Y  +G SREDALEQWL+ILQ+RVPGSVVL+VGTH D F  + AEC++R + F KD ++IM R+  +C SA+ R + +L    + + T L+ N R+QPLRVV+++ELLAL+L SS G     L+  +E +AY G  GYSFPSV S+VP  +L A+ATLEAVRRGADLRGSG     V QRL +GDP + R FVR SEA+SLF +   + SMF  ++ +  +  E +R FL A++ HEA GAILLT  DGGGG + +            +L IHVNP+ FADLVRRVVD+RL+DP +Q ++   ME       M   L+ QH RF++AGEVS+DYL+FLW RDM LG  S++APPLEMSE  V  MVGSLLDVRFM++VRD     +PDRYVV+SCLP+  G                 VDP ++LELK G AI+S +LKLVGA AVP GLVPR LAWCGRG+GR+KACWK+GVCFAFK  HLVLLYE R     S IECHARG+ +D++ A   L D+  ++  L+ D+KYGFPG+GL+ +    +    SD D
Sbjct:  425 QRAYYDTHQMFLTPGALFVLVVDMFTYT-EGQSREDALEQWLEILQARVPGSVVLLVGTHTDLFAENAAECTRRTDRFKKDVEEIMTRLRCECDSAKDRVETELG---EGHTTDLKGNPRYQPLRVVLKEELLALDLTSSDGQDIDLLQQRLEHLAYNGYDGYSFPSVRSVVPEPYLPAIATLEAVRRGADLRGSGRTREAVAQRLGEGDPKKRRSFVRFSEAVSLFTK--QKGSMFSRVSNLFRRAGEPRRIFLAAVKSHEAHGAILLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQAKVEEAMEACTSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMDLGEASQEAPPLEMSEADVEVMVGSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAGLN---------------VDPGKILELKMGSAIYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGRIKACWKRGVCFAFKN-HLVLLYEVRAIDGTSWIECHARGNVSDDDSARTALKDIGDQVHELINDHKYGFPGLGLVRSGESEETVISSDSD 981          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5K9A9_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9A9_9PHAE)

HSP 1 Score: 528 bits (1359), Expect = 9.680e-173
Identity = 305/584 (52.23%), Postives = 384/584 (65.75%), Query Frame = 1
Query:  319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQA-ECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRG--GYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIA---------------------GQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASMR-NLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLL 1977
            +RA     QMFLT  ALFVLVVDMFAY A+GHS EDA+EQWLDILQ+RVPG+V+L+VGTH D F   A EC+KR + F KD + IM+RI   C SA+  A+ +L     E    L+ N  ++PLRVV+E++LL L+L SS     G L+  +E +AY G  GYSF SV S+VP  +L  +ATLEAVR GADLRGSGG    V QRL +GDP + R FVR SEA+SL  +   E+S    ++ +A                     G+  E +R FL AI+ HEA GAILLT+ DGGG  + +            +L IHVNP+ FADLVRRVVD+RL+DP +Q ++   M        M   L+ QH RF++AGEVS+DYL+FLW RDM+LG  S +APPLEMSE  V  MVGSLLDVRFM++VRD +   +PDRYVV+SCLP+  G          P+     VDP +MLELK G A++S +LKLVGA AVP GLVPR LAWCGRG+G +KACWK+GVCFAFK  H+VLLYE RD    S IECHARGS  +E A   L+D+  +++ L+ D KYGFPG+GL+
Sbjct:  130 QRAYYDTHQMFLTQGALFVLVVDMFAY-AEGHSPEDAVEQWLDILQARVPGAVLLLVGTHTDLFEDNATECTKRTDRFKKDVEKIMKRISCQCDSAKNLAETEL----GERHPDLEGNPHYRPLRVVLEEDLLTLDLTSSDWEDIGLLQRRLEHLAYNGYDGYSFSSVRSVVPEPYLPVIATLEAVRLGADLRGSGGTREAVVQRLREGDPRKRRSFVRFSEAVSLHRK-QQEESTLSRVSNLAASLLFPXXXXXXXXXXXXXLFGRDDELRRIFLAAIKSHEAYGAILLTEVDGGGCPQEQRNVGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVDPRQQVKVEQAMAACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASPEAPPLEMSEADVDVMVGSLLDVRFMYRVRDGHDAFVPDRYVVASCLPNKAG----------PE-----VDPGKMLELKAGSAVYSQKLKLVGAHAVPPGLVPRLLAWCGRGEGHIKACWKRGVCFAFKN-HMVLLYEVRDTAGNSWIECHARGSMFDESARTALNDIGDQVNELINDRKYGFPGLGLI 691          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5L2L4_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L4_9PHAE)

HSP 1 Score: 418 bits (1075), Expect = 9.040e-131
Identity = 268/595 (45.04%), Postives = 343/595 (57.65%), Query Frame = 1
Query:  319 RRADLPVAQMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQA-ECSKRVEGFLK-------------------DTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRGGYSFPSVNSIVPTTHLLAVATLEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTAEQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSR------GTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPA-ASMRNLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACSDDD 2022
            +RA     QMFLTP ALFVLVVDMF Y   G S+EDALEQWL+ILQ+RVPGS++L+VGTH D F + A EC++R + F +                   D DDIM R+  +C SA+ RA+ +L    + + T L+ N R+QPLRVV+E++LLALNLASS       L+  +E +AY G                           GADLRGSG     V QRL +G+P + R FVR SEA+SLF     E SM  W++    +  E +R FL A++ HEA GAI LT  DGGGG + +            +L IHVNP+ FADLVRRVVD+RL+ P +Q ++   ME      +S+  L+ QH RFI+ GEVS+DYL+FLW RDM L   S++APPLEMSE  V  MV SLLDVRFM++VRD     +PDRYVV+SCLP+  G          PD     VDP ++LELK G AI+S +LKLV   AVP GLVPR L+                 C      HLVLLYE R     S IECHARG+  +E A   L D+  ++D L+ D+K  FPG+GL+ +    +    SD D
Sbjct:  170 QRAYYDTHQMFLTPGALFVLVVDMFTYEV-GQSKEDALEQWLEILQARVPGSIMLLVGTHTDLFKANAAECTRRTDSFKEGRSYCSTSSNNSYLSPWPTDVDDIMTRMRYECDSAKDRAEAELG---EGHTTDLKGNPRYQPLRVVLEEDLLALNLASSDWQDIDLLQHRLEYLAYNG---------------------------GADLRGSGSTREAVAQRLREGNPKKRRSFVRFSEAVSLFAA-QQEGSMLSWLSNSFLRDNEPRRIFLAAVKSHEAHGAIHLTGVDGGGGSQEQHNTGIGAAASAADLIIHVNPSRFADLVRRVVDVRLVAPRQQAKVEEAMEACPLVRSSLLTLTDQHKRFIKTGEVSKDYLKFLWLRDMDLREASQEAPPLEMSEADVEVMVSSLLDVRFMYRVRDGQHAFVPDRYVVASCLPNKAG----------PD-----VDPGKILELKTGNAIYSQKLKLVRVHAVPPGLVPRLLS-----------------C------HLVLLYEVRATDGTSWIECHARGNVFDESARTALKDIGDQVDELISDHKNRFPGLGLVRSGESEETVVYSDSD 694          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5JXU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXU4_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 1.480e-57
Identity = 126/264 (47.73%), Postives = 158/264 (59.85%), Query Frame = 1
Query: 1054 EKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRGTPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAAS--MRNLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTAMVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGG 1839
            E +R FL AI+  E  GAILLT  DG             +L IHVN + FADL++                V E     P+    +  L+ QH RF++AGEVS+DYL+FLW RDM+LG  S++AP LEMSE  V  MV S LD+R +++VRD     +PDR VV+SCLP+  G          P+     VDP  +LEL+   AI+  +LKLV A AVP GLVPR LAWCGRG+GR+ ACWK+GVCFAFK  HL+LL E R GG
Sbjct:   23 EPRRIFLAAIKSQETHGAILLTGVDGA------------DLIIHVNLSRFADLLK----------------VKEAMEACPSVRPMLLTLTDQHKRFVKAGEVSKDYLKFLWLRDMELGQASQEAPRLEMSEADVEVMVDSFLDLRLVYRVRDGQHAFVPDRNVVASCLPNKAG----------PE-----VDPGNILELETASAIYLQKLKLVVAHAVPPGLVPRELAWCGRGEGRINACWKRGVCFAFKN-HLMLLNEVRAGG 242          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6H5K561_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K561_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 3.280e-28
Identity = 77/163 (47.24%), Postives = 90/163 (55.21%), Query Frame = 1
Query: 1486 MFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDHMRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGRVKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVLSDVVTELDRLLRDNKYGFPGVGL 1974
            M++VRD +   +PDRYVV  C P+              D  R  VDP         G IF   LKLVGA AVP GLVPR LAWCGRG+GR K C K+G+    K KHLVLL E R     S IEC  RG+  +E    VL D   ++  L  DNKYGFPG+GL
Sbjct:    1 MYRVRDGHHAFVPDRYVVHYCFPNT-------------DGRR--VDP---------GKIFQT-LKLVGAHAVPPGLVPRLLAWCGRGEGRYKECCKRGLLLEIK-KHLVLLIELRSTHGASWIECDMRGNLFDESPGKVLKDKDVQIHELFSDNKYGFPGLGL 137          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: D8LK68_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK68_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 2.110e-5
Identity = 32/61 (52.46%), Postives = 40/61 (65.57%), Query Frame = 1
Query:  343 QMFLTPDALFVLVVDMFAYVADGHSR-----EDALEQWLDILQSRVPGSVVLVVGTHGDRF 510
            Q+FLT  ALF+LVVD+F    D  S        A+ +WL IL  RVPG+VV +VGTHGD+F
Sbjct:  491 QIFLTEGALFLLVVDLFELGRDEKSAGIPDPRGAIYRWLVILHERVPGAVVALVGTHGDKF 551          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6P4YCW7_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YCW7_BRABE)

HSP 1 Score: 58.2 bits (139), Expect = 6.060e-5
Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1
Query:  343 QMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLKDTDDIMERIGRDCTSAEARAQQDL----VRDRDENQTGLQANRRHQPLRVVVEKE--LLALNLASSRGGTTG--QLRGAIERVAYRGGYSFPSVNSIVPTT 834
            Q FLTPDA ++L+V++  Y         A+  WLD L +RVPG+VV +VG+  D   S+AE SK+++       DI ER  +   + ++  ++ +     R+    +   +  R+ +  R ++  +  L+     SS   T+G   LR  I   A   G  FP++  I+P T
Sbjct:  503 QFFLTPDAFYLLLVNLQTYSCSEERYRKAVGFWLDTLTARVPGAVVTIVGSKMDMC-SEAEMSKKIK-------DIEERFQQQIDTCKSNTERQIKKLNTREAKSKEEKWEIERKLERARSLLSNQMRLIGTYCLSSAEPTSGLDTLRNHILESASDTGL-FPTLKKILPRT 665          
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Match: A0A6P4YQC6_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4YQC6_BRABE)

HSP 1 Score: 57.8 bits (138), Expect = 6.940e-5
Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 1
Query:  343 QMFLTPDALFVLVVDMFAYVADGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVE-----------GFLKDTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEKELLALNLASSRGGTTGQLRGAIERVAYRGGYSFPSVNSIVPTTHLLAVATLEAVRRGADL 885
            Q+FLT  +L +L VD+ +Y  +  S   ++ +W+DIL++RVPG+ VL+ GTH D+     E   + E            ++KD D  M +I ++  SA   +         +  T L+ + + +PL+     ++  L+ A    G    LR  I RV      +FP +  ++P T       LE++R+   L
Sbjct:  248 QLFLTKGSLHILTVDLASYRRE--SFPASVGKWVDILRARVPGTHVLLAGTHVDQIRDAEEMRMKCEDIENQIDLMQQNYVKDLDRQMRKIKKELQSAREESSDSSQNGYAKRLTELE-DLKSKPLKF---SQVFPLSSAEGLEGVEA-LRAEILRVL-EDTSAFPDLRRVLPKTWADLETRLESLRKDESL 431          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1410.9.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A6H5JSN1_9PHAE1.950e-19758.06Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPJ1_9PHAE4.020e-19657.54Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FU35_ECTSI1.650e-17953.89LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5K9A9_9PHAE9.680e-17352.23Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L4_9PHAE9.040e-13145.04Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JXU4_9PHAE1.480e-5747.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K561_9PHAE3.280e-2847.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK68_ECTSI2.110e-552.46LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6P4YCW7_BRABE6.060e-529.65malignant fibrous histiocytoma-amplified sequence ... [more]
A0A6P4YQC6_BRABE6.940e-527.60malignant fibrous histiocytoma-amplified sequence ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1410contigP-littoralis_Contig1410:17917..20315 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FU35
PFAMsLRR_8,Roc
Model size2023
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons2
Evalue1.41e-181
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
Descriptionregulation of response to stimulus
Cds size1767
COG categoryU
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789663.4027543-UTR-P-littoralis_Contig1410:17916..181711680789663.4027543-UTR-P-littoralis_Contig1410:17916..18171Pylaiella littoralis U1_48UTRP-littoralis_Contig1410 17917..18171 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789663.4165137-CDS-P-littoralis_Contig1410:18171..184721680789663.4165137-CDS-P-littoralis_Contig1410:18171..18472Pylaiella littoralis U1_48CDSP-littoralis_Contig1410 18172..18472 +
1680789663.430162-CDS-P-littoralis_Contig1410:18849..203151680789663.430162-CDS-P-littoralis_Contig1410:18849..20315Pylaiella littoralis U1_48CDSP-littoralis_Contig1410 18850..20315 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1410.9.1prot_P-littoralis_Contig1410.9.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1410 18172..20315 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1410.9.1

>prot_P-littoralis_Contig1410.9.1 ID=prot_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=589bp
MFFRALGRTQARCGRERVLMVRRADLPVAQMFLTPDALFVLVVDMFAYVA
DGHSREDALEQWLDILQSRVPGSVVLVVGTHGDRFNSQAECSKRVEGFLK
DTDDIMERIGRDCTSAEARAQQDLVRDRDENQTGLQANRRHQPLRVVVEK
ELLALNLASSRGGTTGQLRGAIERVAYRGGYSFPSVNSIVPTTHLLAVAT
LEAVRRGADLRGSGGELAEVTQRLFKGDPAEGRPFVRLSEALSLFVELTA
EQSMFEWIAKIAGQTTEKKRAFLDAIQLHEAQGAILLTKADGGGGEKSRG
TPFEEELFIHVNPAWFADLVRRVVDIRLLDPARQGEMVGEMERYAPAASM
RNLSRQHWRFIQAGEVSRDYLRFLWRRDMKLGPVSRKAPPLEMSEEAVTA
MVGSLLDVRFMFQVRDSNGGILPDRYVVSSCLPDYVGCVEPVDADADPDH
MRCVVDPREMLELKKGGAIFSIELKLVGARAVPAGLVPRFLAWCGRGDGR
VKACWKQGVCFAFKGKHLVLLYERRDGGQRSVIECHARGSADNEKAEGVL
SDVVTELDRLLRDNKYGFPGVGLLETVAINKRSACSDDD
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mRNA from alignment at P-littoralis_Contig1410:17917..20315+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1410.9.1 ID=mRNA_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2399bp|location=Sequence derived from alignment at P-littoralis_Contig1410:17917..20315+ (Pylaiella littoralis U1_48)
AAATGGACGTGGTGGGAGCGCCGAGCTAGACGTGAAACTTTGGGATTTTG CTGGGCAAAGGGCATACTACGACACGCACCAGGTGAAAACAAGCTGAAGA TTCAAAACGAAATGCCTAATACCGTTGTGGAGGGTTCGCTGGCGATATTT CCTATGCCCGCCGTAACATTCGGTTTTGTGGTGAATTTGTTGTTGAGCAA ATTGTTGAAATGTTTTATGTGTTTCTAGACTAAGTGTAGGAGACGCGGCG GAAATATGTTCTTCCGAGCCTTGGGGCGCACACAAGCTAGGTGTGGAAGA GAACGCGTACTGATGGTTCGCCGTGCTGACCTGCCCGTTGCTCAGATGTT CCTCACCCCGGACGCTCTCTTCGTCCTGGTTGTGGACATGTTCGCGTACG TGGCGGACGGGCATTCTCGGGAGGATGCCCTCGAGCAGTGGCTTGACATT CTTCAGTCCCGGGTCCCCGGTTCTGTCGTTTTGGTTGTTGGAACACACGG CGACAGGTTTAACAGTCAAGCTGAGTGCAGCAAGCGGGTGGAGGGCTTCC TTAAAGGCGAGTCGGGTGGCATGTGGAGTTGAGCACAATGGATTCGCTTT GCTCGAGCGATCTTCATGACATTTTTGGGTCTTTGAGTTTATGTGCCTCT TGCGTGTCGTCGCCGGTAAGGCAGCATTTCAGTTGCTTCCCTTTCCAGGG ACGTTGGCTTCGCTCTAGGACTCCCGTGTGATGACCATCGCCAAACCAAA ACGTGCTACAACCCCCGTTTTCAGTCGATCTGAAGTCGCGCAAACCCACG CGCACTCTCTCTGCCACACATTTATGTACACACCACTTGTAGAGGGTGCC ACGTGTATAGAACGGCATTCAGCGACCAGGCGCATTACAGTCTACTTTGT CGATGTTTCTGTTATTTTTACCTCACCCGGCAGATACGGACGATATCATG GAACGGATTGGCCGCGATTGCACGTCCGCCGAAGCACGTGCGCAGCAAGA CTTGGTGCGCGACAGGGACGAAAATCAAACGGGTTTGCAGGCGAACCGCC GACACCAACCCCTTCGCGTCGTAGTGGAGAAAGAGCTGCTTGCCCTGAAC CTCGCTTCTTCCCGAGGAGGGACCACCGGGCAGCTTCGCGGGGCTATCGA GCGTGTCGCCTATCGTGGTGGCTACTCTTTCCCGTCAGTGAATAGCATAG TGCCCACGACGCACTTGCTCGCTGTCGCAACGCTGGAAGCAGTTCGTCGT GGTGCAGACCTACGCGGTTCGGGCGGTGAGCTAGCGGAGGTTACTCAAAG GCTTTTCAAGGGGGACCCGGCAGAAGGGCGGCCCTTCGTTCGGTTGTCAG AGGCCCTGTCGCTTTTTGTCGAACTCACAGCCGAGCAATCCATGTTTGAG TGGATCGCGAAGATCGCTGGTCAAACAACGGAAAAGAAACGTGCTTTTCT AGATGCCATCCAGCTGCACGAAGCTCAAGGTGCGATTCTCCTCACCAAAG CCGACGGAGGTGGAGGGGAAAAGAGTAGGGGGACACCGTTTGAGGAAGAG CTCTTCATCCACGTGAACCCGGCCTGGTTTGCTGATCTGGTTCGTCGTGT CGTCGACATTCGTTTACTAGACCCGGCGCGGCAGGGAGAGATGGTTGGAG AGATGGAGAGATACGCACCAGCAGCTTCTATGCGAAATCTCTCTCGACAG CACTGGAGGTTCATTCAGGCTGGGGAGGTGAGCAGAGACTACCTCCGGTT CCTTTGGCGCCGAGACATGAAACTTGGCCCGGTGAGCCGGAAAGCTCCGC CTCTCGAGATGTCAGAAGAAGCCGTCACCGCAATGGTGGGAAGTTTGTTG GATGTCCGGTTCATGTTCCAGGTACGAGACAGCAACGGGGGTATCTTGCC GGACCGATACGTTGTCTCAAGCTGCCTTCCTGACTACGTCGGATGCGTTG AACCTGTGGATGCCGACGCGGATCCTGACCACATGAGATGCGTTGTGGAC CCAAGAGAAATGTTGGAGTTGAAGAAAGGAGGCGCTATTTTTTCGATCGA GCTAAAGCTCGTTGGGGCGCGCGCCGTACCCGCCGGGCTTGTACCGAGGT TCCTTGCTTGGTGTGGGCGTGGAGACGGACGCGTCAAGGCTTGCTGGAAA CAAGGGGTTTGCTTCGCCTTCAAGGGGAAACACTTGGTGTTGCTATATGA GCGTCGAGACGGAGGGCAACGCTCGGTGATCGAGTGCCACGCAAGGGGAA GTGCGGACAACGAGAAGGCAGAAGGAGTTTTGAGCGATGTGGTCACAGAG CTTGATCGGCTTCTCCGTGACAACAAGTACGGGTTCCCTGGCGTCGGGCT GTTGGAGACGGTGGCAATAAACAAGCGATCAGCCTGCTCGGATGACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1410:17917..20315+

>mRNA_P-littoralis_Contig1410.9.1 ID=mRNA_P-littoralis_Contig1410.9.1|Name=mRNA_P-littoralis_Contig1410.9.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1767bp|location=Sequence derived from alignment at P-littoralis_Contig1410:17917..20315+ (Pylaiella littoralis U1_48)
ATGTTCTTCCGAGCCTTGGGGCGCACACAAGCTAGGTGTGGAAGAGAACG
CGTACTGATGGTTCGCCGTGCTGACCTGCCCGTTGCTCAGATGTTCCTCA
CCCCGGACGCTCTCTTCGTCCTGGTTGTGGACATGTTCGCGTACGTGGCG
GACGGGCATTCTCGGGAGGATGCCCTCGAGCAGTGGCTTGACATTCTTCA
GTCCCGGGTCCCCGGTTCTGTCGTTTTGGTTGTTGGAACACACGGCGACA
GGTTTAACAGTCAAGCTGAGTGCAGCAAGCGGGTGGAGGGCTTCCTTAAA
GATACGGACGATATCATGGAACGGATTGGCCGCGATTGCACGTCCGCCGA
AGCACGTGCGCAGCAAGACTTGGTGCGCGACAGGGACGAAAATCAAACGG
GTTTGCAGGCGAACCGCCGACACCAACCCCTTCGCGTCGTAGTGGAGAAA
GAGCTGCTTGCCCTGAACCTCGCTTCTTCCCGAGGAGGGACCACCGGGCA
GCTTCGCGGGGCTATCGAGCGTGTCGCCTATCGTGGTGGCTACTCTTTCC
CGTCAGTGAATAGCATAGTGCCCACGACGCACTTGCTCGCTGTCGCAACG
CTGGAAGCAGTTCGTCGTGGTGCAGACCTACGCGGTTCGGGCGGTGAGCT
AGCGGAGGTTACTCAAAGGCTTTTCAAGGGGGACCCGGCAGAAGGGCGGC
CCTTCGTTCGGTTGTCAGAGGCCCTGTCGCTTTTTGTCGAACTCACAGCC
GAGCAATCCATGTTTGAGTGGATCGCGAAGATCGCTGGTCAAACAACGGA
AAAGAAACGTGCTTTTCTAGATGCCATCCAGCTGCACGAAGCTCAAGGTG
CGATTCTCCTCACCAAAGCCGACGGAGGTGGAGGGGAAAAGAGTAGGGGG
ACACCGTTTGAGGAAGAGCTCTTCATCCACGTGAACCCGGCCTGGTTTGC
TGATCTGGTTCGTCGTGTCGTCGACATTCGTTTACTAGACCCGGCGCGGC
AGGGAGAGATGGTTGGAGAGATGGAGAGATACGCACCAGCAGCTTCTATG
CGAAATCTCTCTCGACAGCACTGGAGGTTCATTCAGGCTGGGGAGGTGAG
CAGAGACTACCTCCGGTTCCTTTGGCGCCGAGACATGAAACTTGGCCCGG
TGAGCCGGAAAGCTCCGCCTCTCGAGATGTCAGAAGAAGCCGTCACCGCA
ATGGTGGGAAGTTTGTTGGATGTCCGGTTCATGTTCCAGGTACGAGACAG
CAACGGGGGTATCTTGCCGGACCGATACGTTGTCTCAAGCTGCCTTCCTG
ACTACGTCGGATGCGTTGAACCTGTGGATGCCGACGCGGATCCTGACCAC
ATGAGATGCGTTGTGGACCCAAGAGAAATGTTGGAGTTGAAGAAAGGAGG
CGCTATTTTTTCGATCGAGCTAAAGCTCGTTGGGGCGCGCGCCGTACCCG
CCGGGCTTGTACCGAGGTTCCTTGCTTGGTGTGGGCGTGGAGACGGACGC
GTCAAGGCTTGCTGGAAACAAGGGGTTTGCTTCGCCTTCAAGGGGAAACA
CTTGGTGTTGCTATATGAGCGTCGAGACGGAGGGCAACGCTCGGTGATCG
AGTGCCACGCAAGGGGAAGTGCGGACAACGAGAAGGCAGAAGGAGTTTTG
AGCGATGTGGTCACAGAGCTTGATCGGCTTCTCCGTGACAACAAGTACGG
GTTCCCTGGCGTCGGGCTGTTGGAGACGGTGGCAATAAACAAGCGATCAG
CCTGCTCGGATGACGAC
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