mRNA_P-littoralis_Contig141.97.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5JIR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIR5_9PHAE) HSP 1 Score: 282 bits (722), Expect = 9.300e-90 Identity = 139/230 (60.43%), Postives = 165/230 (71.74%), Query Frame = 2
Query: 239 FEDVPNAGKVNELAQNIANHIEDGLRGDTDHAVSVVLERGDALFNGCLDWLGPLWAEVKGLPPTTHLIVACWTGSVDGLAALEHRKADTKTATAFTLTRFAVWGERLQPWINDPSVLEAGFKTAREEIALHYLCCIINHVEEELYYFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 928
F D+ + N+ A+ + + GL GDT+ V+ V +RGDALFNG LDWLG LWA VKGL PT LI+A W G VDG AA+ HRKADTK ATAFTL RFA W RLQ WI+ P VLE GFK + ALHYL CIIN V +ELY F VEERK A AIK+ YPS +YLI++ R +VLYY+ GW+ASR WTHQRR NLSPDW R+V HNTYQSS+ A A +P++ F EVV
Sbjct: 92 FGDIQDNTPANDAARGMRTLLVGGLHGDTNRVVAAVHKRGDALFNGRLDWLGELWAVVKGLQPTADLILARWKGHVDGTAAVSHRKADTKAATAFTLARFADWPGRLQAWIDHPDVLERGFKMYPTKKALHYLSCIINQVAQELYNFLVEERKRANAIKVLYPSTQYLISQSRGQVLYYVCGWMASRAWTHQRRRNLSPDWYRIVEHNTYQSSEMAKARDPMIGQFAEVV 321
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5K201_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K201_9PHAE) HSP 1 Score: 245 bits (625), Expect = 1.580e-73 Identity = 128/219 (58.45%), Postives = 146/219 (66.67%), Query Frame = 2
Query: 266 VNELAQNIANHIEDGLRGDTDHAVSVVLERGDALFNGCLDWLGPLWAEVKGLPPTTHLIVACWTGSVDGLAALEHRKADTKTATAFTLTRFAVWGERLQPWINDPSVLEAGFKTAREEIALHYLCCIINHVEEELYYFFVEERKNAIAIK-LEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 919
V + N+ + I GLRGDTD + V ERGD LFN WLGPLW +VKGL PT LI W G VDG+AAL+HRKADT A AFTL RFA W RL WIN P VLE GFK EE ALHYL CIINHVEE V ER + PS++Y I++PR +VLYYIAGW AS+ THQ RHNLS DWVRVV+HNT +SS+EAI +LRDFV
Sbjct: 18 VQNVRVNVRSQIARGLRGDTDDVIKKVRERGDDLFNRRKSWLGPLWEKVKGLAPTARLISEAWNGHVDGVAALKHRKADTMAAAAFTLARFAGWEGRLTAWINQPEVLEQGFKMYPEEKALHYLSCIINHVEEVGVVQGVHERAEEFRGRGALVPSERYQISRPRGQVLYYIAGWAASKALTHQARHNLSQDWVRVVQHNTRRSSREAIFTNVMLRDFV 236
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5KFA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFA5_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.360e-45 Identity = 87/153 (56.86%), Postives = 100/153 (65.36%), Query Frame = 2
Query: 209 EAAVQYMRGAFEDVPNAGKVNELAQNIANHIEDGLRGDTDHAVSVVLERGDALF-NGCLDWLGPLWAEVKGLPPTTHLIVACWTGSVDGLAALEHRKADTKTATAFTLTRFAVWGERLQPWINDPSVLEAGFKTAREEIALHYLCCIINHVEE 664
E + ++GA +D P + L + + I GLRGD D V ER D LF G WLGPLW +VK LPPTT LI W G VDG+AALEHRKADTK ATAFTLTRFA W RL+ WI+ P VLEAG + +EE ALHYL CIINHVEE
Sbjct: 4 EHIARCIQGAKDDDPF---LQNLRVYVRSQIASGLRGDLDGVKKKVWERVDPLFFEGRRRWLGPLWKKVKDLPPTTRLIPDAWNGHVDGVAALEHRKADTKAATAFTLTRFAGWEGRLRAWISQPEVLEAGLQDYQEERALHYLSCIINHVEE 153
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5K4F6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4F6_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.460e-35 Identity = 75/134 (55.97%), Postives = 84/134 (62.69%), Query Frame = 2
Query: 266 VNELAQNIANHIEDGLRGDTDHAVSVVLERGDALF-NGCLDWLGPLWAEVKGLPPTTHLIVACWTGSVDGLAALEHRKADTKTATAFTLTRFAVWGERLQPWINDPSVLEAGFKTAREEIALHYLCCIINHVEE 664
V L + + I GLRG D V ER D LF G WLGPLW +V+ L PTT LI W G VDG+AA EHRKADTK ATA TLT A W RL+ WI+ P VLEAG + +EE LHYL CIINHVEE
Sbjct: 175 VQNLWVYVRSQIASGLRGGLDGVKRKVWERVDPLFFEGRRRWLGPLWKKVEDLAPTTRLISDAWNGHVDGVAAFEHRKADTKAATASTLTLNAGWEGRLRAWISQPEVLEAGLRDYQEEKELHYLSCIINHVEE 308
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5KGF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 2.600e-25 Identity = 47/79 (59.49%), Postives = 63/79 (79.75%), Query Frame = 2
Query: 680 FVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDF 916
+ +ERK+++A++L YPS+++ I KP +VLYYIAGW AS+ WTH RRHNLS DWVRVV+HNT +S EAI + +LRDF
Sbjct: 50 YAKERKDSVAVELSYPSERHQITKPCGQVLYYIAGWAASKAWTHHRRHNLSQDWVRVVQHNTRRSRGEAICTDSMLRDF 128
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5JQL1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQL1_9PHAE) HSP 1 Score: 107 bits (268), Expect = 2.590e-24 Identity = 48/76 (63.16%), Postives = 63/76 (82.89%), Query Frame = 2
Query: 683 VEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLR 910
V+ERK+++A++L YPS++Y I K R +VLYYIAGW AS+ WTH+RRHNLS DWVRVV+HNT +SS EAI + +LR
Sbjct: 140 VKERKDSVAVELSYPSERYQITKSRGQVLYYIAGWAASKAWTHKRRHNLSQDWVRVVQHNTRRSSGEAICTDSMLR 215
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5JX42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX42_9PHAE) HSP 1 Score: 106 bits (265), Expect = 2.990e-23 Identity = 49/85 (57.65%), Postives = 68/85 (80.00%), Query Frame = 2
Query: 665 ELYYFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 919
ELY +V+ERK+++A++L YPS++Y I++PR +VL+ IAGW S+ THQ RHNLS DWVRVV+HNT +SS+EA+ +LRDFV
Sbjct: 13 ELYKVYVKERKDSVAVELSYPSERYQISRPRGQVLHDIAGWATSKALTHQARHNLSQDWVRVVQHNTRRSSREAMFTNVMLRDFV 97
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5K7M3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7M3_9PHAE) HSP 1 Score: 107 bits (268), Expect = 3.040e-23 Identity = 72/214 (33.64%), Postives = 104/214 (48.60%), Query Frame = 2
Query: 311 LRGDTDHAVSVVLERGDALFNGCLDWLGPLWA---EVKGLPPTTHLIVACWTGSVDGLAALEHRKADTKTATAFTLTRFAVWGERLQPWINDPSVLEAGFKTAREEIALHYLCCIINHVEE----ELYYFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLSP-DWVRVVRHNTYQSSQEAIAHEPVLRDFVEVV 928
+ D V V++ D + L PLWA +V PT +I+ W VD LA+ K TK AT FT+ RF W L+ W++D + F E H LC +IN V+E L + ++A I YP + ++ PR R+LYYIAGW+ S++ TH RRHN+ +W+ +V + Y S + A +E LR E V
Sbjct: 1 MTDDPGVIVGNVVKAVDTVLGEWYPHLLPLWATLTDVNNFGPTIKVILDEWKALVDLLASTCKGKRSTKEATKFTVARFQRWEGTLRGWMSDDVIQRVMFGLQSVERGKHELCGVINQVDEVNLRRLGGLAENKLRDANVITPTYPRTQVALSIPRRRLLYYIAGWVLSKIVTHVRRHNIQEIEWMWIVDRHKYPSKRAAEENEMELRGVTEEV 214
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE) HSP 1 Score: 105 bits (261), Expect = 9.090e-22 Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 2
Query: 629 HYLCCIINHVEEELYYFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNL-SPDWVRVVRHNTYQSSQEAIAHEPVLRDFV 919
HYLCCIIN V+EELY FV+ER+ + + L YP++ + I+ R +VLYYIAGWL S+ W+ +RRHN+ +W +V+HN SS AI +P+L+D V
Sbjct: 97 HYLCCIINVVDEELYRVFVKEREKSNTVALTYPTEIHKISTARGKVLYYIAGWLLSKAWSRKRRHNIPDQEWDFIVQHNHSPSSAGAIERDPILQDMV 194
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Match: A0A6H5KKY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKY9_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 3.660e-14 Identity = 33/57 (57.89%), Postives = 47/57 (82.46%), Query Frame = 2
Query: 662 EELYYFFVEERKNAIAIKLEYPSQKYLIAKPRARVLYYIAGWLASRVWTHQRRHNLS 832
+ELY +V++RK+++A++L YPS +Y I +PR +VLYY+AGW AS+ WTHQR HNLS
Sbjct: 2 QELYKVYVKKRKDSVAVELSYPSVRYQITQPRGQVLYYVAGWAASKAWTHQRSHNLS 58 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig141.97.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig141.97.1 >prot_P-littoralis_Contig141.97.1 ID=prot_P-littoralis_Contig141.97.1|Name=mRNA_P-littoralis_Contig141.97.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=305bp MVRLFGAAGEENQAADEEEEEEEEDSDDAENQRKKQPVSASRGEESEEDNback to top mRNA from alignment at P-littoralis_Contig141:499688..501620+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig141.97.1 ID=mRNA_P-littoralis_Contig141.97.1|Name=mRNA_P-littoralis_Contig141.97.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1933bp|location=Sequence derived from alignment at P-littoralis_Contig141:499688..501620+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig141:499688..501620+ >mRNA_P-littoralis_Contig141.97.1 ID=mRNA_P-littoralis_Contig141.97.1|Name=mRNA_P-littoralis_Contig141.97.1|organism=Pylaiella littoralis U1_48|type=CDS|length=915bp|location=Sequence derived from alignment at P-littoralis_Contig141:499688..501620+ (Pylaiella littoralis U1_48)back to top |