mRNA_P-littoralis_Contig1406.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1406.3.1
Unique NamemRNA_P-littoralis_Contig1406.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A2D8LNB5_9FLAO (Phenylacetic acid degradation protein n=3 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LNB5_9FLAO)

HSP 1 Score: 483 bits (1242), Expect = 1.540e-168
Identity = 242/248 (97.58%), Postives = 243/248 (97.98%), Query Frame = 3
Query:  327 RKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             K+K    FAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV
Sbjct:  110 EKAKNYLFFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A5J4FUK6_9FLAO (Phenylacetic acid degradation protein n=1 Tax=Patiriisocius marinistellae TaxID=2494560 RepID=A0A5J4FUK6_9FLAO)

HSP 1 Score: 447 bits (1149), Expect = 2.110e-154
Identity = 223/250 (89.20%), Postives = 230/250 (92.00%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
            +  + K    FAAGSGITPVLSMVKAHL  EPNSTCKLFYVNKTAKSIIFKEELEQLRNQ+FGRFEI YFLTKERRDIELFNGRFDDEKM VL+KTFIDIPDTDEVFLCGPEKMV FVS YL+ AGLPK+ IHFELFV GLSDEDIARQERLAKQNVEGTEV IVDGGKEF FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVL GAVEMKINYAL DKEVSQNLVLSCQAVPTTD+VKVDFDV
Sbjct:  108 QPSEEKNYLFFAAGSGITPVLSMVKAHLVQEPNSTCKLFYVNKTAKSIIFKEELEQLRNQFFGRFEINYFLTKERRDIELFNGRFDDEKMEVLTKTFIDIPDTDEVFLCGPEKMVNFVSQYLINAGLPKENIHFELFVTGLSDEDIARQERLAKQNVEGTEVTIVDGGKEFSFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLGGAVEMKINYALSDKEVSQNLVLSCQAVPTTDKVKVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A6G6GP46_9FLAO (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GP46_9FLAO)

HSP 1 Score: 443 bits (1139), Expect = 6.990e-153
Identity = 217/248 (87.50%), Postives = 234/248 (94.35%), Query Frame = 3
Query:  327 RKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             K+K    FAAGSGITPVLSM+K+HLA+E  +TCKLFYVNKTAKSIIFKEELEQLRNQYFGR EIYYFLTKERRDIELFNGRF+DEKM VL+KTFIDIPDT EVFLCGPEKMV +VS YL+ AGLPK+L+HFELFV GLS+EDIARQERLA+QNVEGTEVVIVDGGKEF+FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEV+EGAVEMKINYALDDKEV+QNLVLSCQAVPTTD+VKVDFDV
Sbjct:  110 NKAKNYLFFAAGSGITPVLSMIKSHLAAETQATCKLFYVNKTAKSIIFKEELEQLRNQYFGRLEIYYFLTKERRDIELFNGRFNDEKMEVLTKTFIDIPDTSEVFLCGPEKMVNYVSAYLIAAGLPKELVHFELFVTGLSEEDIARQERLAQQNVEGTEVVIVDGGKEFQFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVVEGAVEMKINYALDDKEVAQNLVLSCQAVPTTDKVKVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A370Q622_9FLAO (Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n=2 Tax=Marinirhabdus gelatinilytica TaxID=1703343 RepID=A0A370Q622_9FLAO)

HSP 1 Score: 442 bits (1137), Expect = 2.000e-152
Identity = 217/248 (87.50%), Postives = 232/248 (93.55%), Query Frame = 3
Query:  327 RKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             K+K    FAAGSGITPVLSM+K+HLA+E  STCKLFYVNKTAKSIIFKEELEQLRN YFGR EIYYFLTKE+RDIELFNGRFDDEKM VL+KTFIDIPDT EVFLCGPEKMV++VSNYL+EAGLPK+L+HFELFV GLSDEDIARQERLA+QNVEGTEV+IVDGGKEF FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEV EG VEMKINYALDDKEV+Q LVLSCQAVPTTD+VKVDFDV
Sbjct:  120 NKAKNYLFFAAGSGITPVLSMIKSHLAAEKESTCKLFYVNKTAKSIIFKEELEQLRNTYFGRLEIYYFLTKEKRDIELFNGRFDDEKMEVLTKTFIDIPDTSEVFLCGPEKMVQYVSNYLIEAGLPKELVHFELFVTGLSDEDIARQERLAQQNVEGTEVIIVDGGKEFTFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVKEGNVEMKINYALDDKEVAQMLVLSCQAVPTTDKVKVDFDV 367          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A7K1GG51_9FLAO (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Winogradskyella ouciana TaxID=2608631 RepID=A0A7K1GG51_9FLAO)

HSP 1 Score: 441 bits (1133), Expect = 5.710e-152
Identity = 216/247 (87.45%), Postives = 230/247 (93.12%), Query Frame = 3
Query:  330 KSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
            K+K    FAAGSGITPVLSM+KAHL +EPNSTCKLFYVNKTAKSIIFKEELEQLRN YFGR EIYYFLTKERRDIELFNGRFDDEKM VL+KTFIDIPDT EVFLCGPE+MVE+VSNYL+EAGLPK+ +HFELFVKGLSDEDI R ERLA+QNVEGTEV IVDGGKEF FTMTKEYDNILDAAL AGADLPFACKGGVCSTCKCEV +G+VEMKINYALDDKEVSQNLVLSCQAVPT+D+V VDFDV
Sbjct:  111 KAKNYLFFAAGSGITPVLSMIKAHLKAEPNSTCKLFYVNKTAKSIIFKEELEQLRNTYFGRLEIYYFLTKERRDIELFNGRFDDEKMQVLTKTFIDIPDTSEVFLCGPEQMVEYVSNYLIEAGLPKEFVHFELFVKGLSDEDIKRAERLAQQNVEGTEVTIVDGGKEFSFTMTKEYDNILDAALAAGADLPFACKGGVCSTCKCEVKDGSVEMKINYALDDKEVSQNLVLSCQAVPTSDKVVVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: UPI0015CD3242 (FAD-binding oxidoreductase n=1 Tax=Winogradskyella ursingii TaxID=2686079 RepID=UPI0015CD3242)

HSP 1 Score: 439 bits (1130), Expect = 1.630e-151
Identity = 215/250 (86.00%), Postives = 231/250 (92.40%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             S KSK    FAAGSGITPVLSM+K+HLA EPNSTCKLFYVNKTAKSIIFKEELEQLRN+YFGR EIYYFLTKERRDI+LFNGRFDDEKM +L+ TFIDIPDT EVFLCGPE+MVE+VSNYLVEAGLPK+L+HFELFVKGLSDEDI R ERLA+QNVEGTEV IVDGGKEF FTMTK++DNILDAAL AGADLPFACKGGVCSTCKCEV EG+VEMKINYALD+KEV QNLVLSCQAVPTTD+V VDFDV
Sbjct:  108 SSEKSKNYLFFAAGSGITPVLSMIKSHLAQEPNSTCKLFYVNKTAKSIIFKEELEQLRNRYFGRLEIYYFLTKERRDIDLFNGRFDDEKMKLLTNTFIDIPDTSEVFLCGPEQMVEYVSNYLVEAGLPKELVHFELFVKGLSDEDIKRAERLAQQNVEGTEVTIVDGGKEFAFTMTKDFDNILDAALNAGADLPFACKGGVCSTCKCEVKEGSVEMKINYALDEKEVGQNLVLSCQAVPTTDKVVVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: UPI0015C0447A (FAD-binding oxidoreductase n=6 Tax=Winogradskyella TaxID=286104 RepID=UPI0015C0447A)

HSP 1 Score: 439 bits (1130), Expect = 1.630e-151
Identity = 214/250 (85.60%), Postives = 231/250 (92.40%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             + K+K    FAAGSGITPVLSMVKAHL  EPNSTCKLFYVNKTAKSIIFKEELEQLRN YFGR EIYYFLTKERRDIELFNGRFDD+KM VL+KTFIDIPDT EVFLCGPEKM+ +VS+YL+EAGLPK+L+HFELFVKGLSDEDI R ERLA+QNVEGT++ IVDGGKEF FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEV EGAVEMKINYALD+KEVSQNLVLSCQ+VPT+D+V VDFDV
Sbjct:  108 NAEKAKNYLFFAAGSGITPVLSMVKAHLQGEPNSTCKLFYVNKTAKSIIFKEELEQLRNTYFGRLEIYYFLTKERRDIELFNGRFDDDKMKVLTKTFIDIPDTSEVFLCGPEKMINYVSSYLIEAGLPKELVHFELFVKGLSDEDIKRAERLAQQNVEGTKITIVDGGKEFSFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVKEGAVEMKINYALDEKEVSQNLVLSCQSVPTSDKVVVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: S7VTM8_9FLAO (Phenylacetate-CoA oxygenase/reductase, PaaK subunit n=13 Tax=Winogradskyella TaxID=286104 RepID=S7VTM8_9FLAO)

HSP 1 Score: 438 bits (1126), Expect = 6.600e-151
Identity = 214/250 (85.60%), Postives = 229/250 (91.60%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
             + K K    FAAGSG+TPVLSMVKAHL +EPNSTCKLFYVNKTAKSIIFKEELEQLRN YFGRFEIYYFLTKERRDIELFNGRFDDEKM VL+KTFIDIPDT EVFLCGPEKMV +VS YL+ AGLPK+L+H+ELFV GLSDEDI R ERLA+QNVEG EV IVDGGKEF FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKC+V++GAVEMKINYALD+KEVSQNLVLSCQAVPTTD+V VDFDV
Sbjct:  108 NAEKGKNYLFFAAGSGVTPVLSMVKAHLQAEPNSTCKLFYVNKTAKSIIFKEELEQLRNTYFGRFEIYYFLTKERRDIELFNGRFDDEKMQVLTKTFIDIPDTSEVFLCGPEKMVNYVSEYLINAGLPKELVHYELFVTGLSDEDIKRAERLAQQNVEGVEVTIVDGGKEFVFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCKVIDGAVEMKINYALDEKEVSQNLVLSCQAVPTTDKVVVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: UPI001C06D331 (FAD-binding oxidoreductase n=1 Tax=Winogradskyella psychrotolerans TaxID=1344585 RepID=UPI001C06D331)

HSP 1 Score: 438 bits (1126), Expect = 6.600e-151
Identity = 215/250 (86.00%), Postives = 229/250 (91.60%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
            +   SK    FAAGSGITPVLSM+KAHL +EPN+TCKLFYVNKTAKSIIFKEELEQLRN+YFGR EIYYFLTKERRDIELFNGRFDDEKM VL+KTFIDIPDT+EVFLCGPEKMV +VSNYL++AGLPK  +HFELFV GLSDEDI R ERLAKQNVEGTE+ IVDGGKEF FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEV EGAVEMKINYAL +KEVSQNLVLSCQAVPTTD+V VDFDV
Sbjct:  108 QPETSKNYLFFAAGSGITPVLSMIKAHLQAEPNATCKLFYVNKTAKSIIFKEELEQLRNKYFGRLEIYYFLTKERRDIELFNGRFDDEKMKVLTKTFIDIPDTNEVFLCGPEKMVNYVSNYLIKAGLPKGFVHFELFVTGLSDEDIKRAERLAKQNVEGTEITIVDGGKEFSFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVKEGAVEMKINYALSEKEVSQNLVLSCQAVPTTDKVIVDFDV 357          
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Match: A0A848UL45_9FLAO (2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=Winogradskyella sp. TaxID=1883156 RepID=A0A848UL45_9FLAO)

HSP 1 Score: 437 bits (1125), Expect = 9.370e-151
Identity = 213/250 (85.20%), Postives = 230/250 (92.00%), Query Frame = 3
Query:  321 KSRKSKELFVFAAGSGITPVLSMVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLTKERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYLVEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYALDDKEVSQNLVLSCQAVPTTDRVKVDFDV 1070
            +  K+K    FAAGSGITPVLSM+K+HLA+EPN+TCKLFYVNKTAKSIIFKEELEQLRN YFGR EIYYFLTKERRDIELFNGRFDDEKM +L+KTFIDIPDT EVFLCGPEKMV +VS YL+ AGLPK+L+HFELFVKGLSDEDI R ERLA+Q +EG EV IVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEV EG+VEMKINYALDDKEVSQNLVLSCQAVPT+D+V VDFDV
Sbjct:  108 QPEKAKNYLFFAAGSGITPVLSMIKSHLAAEPNATCKLFYVNKTAKSIIFKEELEQLRNTYFGRLEIYYFLTKERRDIELFNGRFDDEKMQMLTKTFIDIPDTSEVFLCGPEKMVNYVSEYLINAGLPKELVHFELFVKGLSDEDIKRAERLAQQKIEGVEVTIVDGGKEFEFTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVKEGSVEMKINYALDDKEVSQNLVLSCQAVPTSDKVVVDFDV 357          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1406.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D8LNB5_9FLAO1.540e-16897.58Phenylacetic acid degradation protein n=3 Tax=Flav... [more]
A0A5J4FUK6_9FLAO2.110e-15489.20Phenylacetic acid degradation protein n=1 Tax=Pati... [more]
A0A6G6GP46_9FLAO6.990e-15387.502Fe-2S iron-sulfur cluster binding domain-containi... [more]
A0A370Q622_9FLAO2.000e-15287.50Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE n... [more]
A0A7K1GG51_9FLAO5.710e-15287.452Fe-2S iron-sulfur cluster binding domain-containi... [more]
UPI0015CD32421.630e-15186.00FAD-binding oxidoreductase n=1 Tax=Winogradskyella... [more]
UPI0015C0447A1.630e-15185.60FAD-binding oxidoreductase n=6 Tax=Winogradskyella... [more]
S7VTM8_9FLAO6.600e-15185.60Phenylacetate-CoA oxygenase/reductase, PaaK subuni... [more]
UPI001C06D3316.600e-15186.00FAD-binding oxidoreductase n=1 Tax=Winogradskyella... [more]
A0A848UL45_9FLAO9.370e-15185.202Fe-2S iron-sulfur cluster binding domain-containi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1406contigP-littoralis_Contig1406:8180..9252 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog641526.ADIWIN_2305
Preferred namepaaE
PFAMsFAD_binding_6,Fer2,NAD_binding_1
Model size1073
Max annot lvl976|Bacteroidetes
KEGG rclassRC02690
KEGG koko:K02613
KEGG ReactionR09838
KEGG Pathwayko00360,ko01120,map00360,map01120
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.26e-143
EggNOG OGsCOG1018@1|root,COG1018@2|Bacteria,4NF24@976|Bacteroidetes,1HX5B@117743|Flavobacteriia
DescriptionFlavodoxin reductases (Ferredoxin-NADPH reductases) family 1
Cds size687
COG categoryC
BRITEko00000,ko00001
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.2304144-UTR-P-littoralis_Contig1406:8179..85651680789659.2304144-UTR-P-littoralis_Contig1406:8179..8565Pylaiella littoralis U1_48UTRP-littoralis_Contig1406 8180..8565 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.242222-CDS-P-littoralis_Contig1406:8565..92521680789659.242222-CDS-P-littoralis_Contig1406:8565..9252Pylaiella littoralis U1_48CDSP-littoralis_Contig1406 8566..9252 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1406.3.1prot_P-littoralis_Contig1406.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1406 8566..9252 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1406.3.1

>prot_P-littoralis_Contig1406.3.1 ID=prot_P-littoralis_Contig1406.3.1|Name=mRNA_P-littoralis_Contig1406.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MVKAHLASEPNSTCKLFYVNKTAKSIIFKEELEQLRNQYFGRFEIYYFLT
KERRDIELFNGRFDDEKMAVLSKTFIDIPDTDEVFLCGPEKMVEFVSNYL
VEAGLPKDLIHFELFVKGLSDEDIARQERLAKQNVEGTEVVIVDGGKEFE
FTMTKEYDNILDAALGAGADLPFACKGGVCSTCKCEVLEGAVEMKINYAL
DDKEVSQNLVLSCQAVPTTDRVKVDFDV*
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mRNA from alignment at P-littoralis_Contig1406:8180..9252+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1406.3.1 ID=mRNA_P-littoralis_Contig1406.3.1|Name=mRNA_P-littoralis_Contig1406.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1073bp|location=Sequence derived from alignment at P-littoralis_Contig1406:8180..9252+ (Pylaiella littoralis U1_48)
GTGGCGACCTTTCATACTTTATCGGTAAAAGACATTTACAAAGAGACAGA CGATTGTTCTGTGATTACATTTAATGTTCCTTCGGAATTGGAAACAGAAT TCAAATTCCGGCAAGGGCAACACCTTACCCTTAAAGCTGATATTAACGGA GAAGATGTGCGCAGATCGTATAGCTTGTGTTCTGGACCCGTAGATGGCGA ATGGAAAGTAGCTGTTAAGAAAATATTGGGCGGTAAATTTTCAAGCTTTG TAAACGATTCCTTACAGGCGGGTGATACACTTGAAGTTATGTCGCCTAGT GGCACTTTTGGAGTTGAAGTAAGTCCAGAAAAAGCAAAGAATTATTTGTT TTTGCCGCAGGAAGTGGAATCACGCCAGTCTTATCCATGGTAAAAGCGCA TTTGGCGTCAGAACCAAACTCAACATGTAAGCTGTTTTACGTGAATAAAA CAGCAAAATCTATTATCTTTAAAGAAGAATTGGAACAGCTTCGAAATCAG TATTTTGGTCGCTTCGAAATTTACTATTTTCTGACCAAAGAACGTCGCGA TATCGAATTGTTTAACGGAAGGTTTGACGACGAAAAGATGGCGGTACTTT CCAAAACATTTATCGACATCCCAGATACAGACGAGGTATTTCTATGTGGC CCAGAAAAAATGGTAGAATTCGTATCGAATTATTTAGTTGAAGCTGGCTT GCCTAAAGATTTAATTCATTTTGAACTCTTTGTGAAAGGACTTTCAGATG AAGACATAGCCCGCCAAGAACGGTTGGCAAAACAAAATGTAGAAGGAACC GAAGTAGTAATTGTTGACGGCGGTAAAGAATTTGAATTTACGATGACTAA GGAGTATGACAACATACTCGATGCCGCATTAGGTGCAGGAGCCGACCTAC CTTTTGCTTGTAAAGGCGGCGTTTGTAGTACCTGTAAATGTGAAGTGTTG GAAGGTGCCGTAGAGATGAAAATAAATTATGCCCTCGACGATAAAGAGGT GTCACAGAATTTGGTGTTGAGTTGCCAAGCGGTGCCAACTACAGATCGAG TTAAAGTTGATTTTGATGTGTAA
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Coding sequence (CDS) from alignment at P-littoralis_Contig1406:8180..9252+

>mRNA_P-littoralis_Contig1406.3.1 ID=mRNA_P-littoralis_Contig1406.3.1|Name=mRNA_P-littoralis_Contig1406.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=687bp|location=Sequence derived from alignment at P-littoralis_Contig1406:8180..9252+ (Pylaiella littoralis U1_48)
ATGGTAAAAGCGCATTTGGCGTCAGAACCAAACTCAACATGTAAGCTGTT
TTACGTGAATAAAACAGCAAAATCTATTATCTTTAAAGAAGAATTGGAAC
AGCTTCGAAATCAGTATTTTGGTCGCTTCGAAATTTACTATTTTCTGACC
AAAGAACGTCGCGATATCGAATTGTTTAACGGAAGGTTTGACGACGAAAA
GATGGCGGTACTTTCCAAAACATTTATCGACATCCCAGATACAGACGAGG
TATTTCTATGTGGCCCAGAAAAAATGGTAGAATTCGTATCGAATTATTTA
GTTGAAGCTGGCTTGCCTAAAGATTTAATTCATTTTGAACTCTTTGTGAA
AGGACTTTCAGATGAAGACATAGCCCGCCAAGAACGGTTGGCAAAACAAA
ATGTAGAAGGAACCGAAGTAGTAATTGTTGACGGCGGTAAAGAATTTGAA
TTTACGATGACTAAGGAGTATGACAACATACTCGATGCCGCATTAGGTGC
AGGAGCCGACCTACCTTTTGCTTGTAAAGGCGGCGTTTGTAGTACCTGTA
AATGTGAAGTGTTGGAAGGTGCCGTAGAGATGAAAATAAATTATGCCCTC
GACGATAAAGAGGTGTCACAGAATTTGGTGTTGAGTTGCCAAGCGGTGCC
AACTACAGATCGAGTTAAAGTTGATTTTGATGTGTAA
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