mRNA_P-littoralis_Contig1406.1.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1406.1.1
Unique NamemRNA_P-littoralis_Contig1406.1.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A2D8LND2_9FLAO (Uncharacterized protein n=2 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D8LND2_9FLAO)

HSP 1 Score: 757 bits (1954), Expect = 3.730e-259
Identity = 389/435 (89.43%), Postives = 398/435 (91.49%), Query Frame = 1
Query:    1 MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFLQIYPTLR*LPTEAM*RLTKIKITMGGSYGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYGHPYSFLFNQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDFE 1305
            MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSH+WIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEK+          ++    +      P     P      + K K ++  + GSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYGHPYSFLFNQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDFE
Sbjct:    1 MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHMWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKKASLYRYNYFTQEEQWSQTVPADLPYATVTPYRGDVAINKDKKSLWVAPGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYGHPYSFLFNQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDFE 435          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A6G6GNX1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium RR4-40 TaxID=2744027 RepID=A0A6G6GNX1_9FLAO)

HSP 1 Score: 618 bits (1594), Expect = 4.050e-205
Identity = 304/437 (69.57%), Postives = 362/437 (82.84%), Query Frame = 1
Query:    1 MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFLQIYPTLR*LPTEAM*RLTKIKITMGGSYGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYGHPYSFLFNQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDFE*E 1311
            M++ +  + +LL+T SA+AQ++DIVVQSMHAEGST+AL+DN R LLVTYGYKDQTLKFWNRD+G LYHTEDLGGY  D EIN   GKTY L+SNTVLVYDNT+FKEIGRYPLGRIH+MHFH+    GYLMVYADDVNGAKALY+L+E ++EF++TQVPVFPGEGEISHFEINSTNSH+WIATNFMENYFYSF TG++++TKDYVL LMDDGDA++  YSY+EK+  F       ++    +      P     P     ++     +M  + GSSLLVELDANSGYIMGKIYREE+KRAMLSDGDLLYVQSGV KP+AKFKRYEAQPIT++GFNL+EAS+I  +QN++ TELV TDYYGHPYSFLFNQATTRFTKYAFEN NT+QYNKLLVDS+N++FYA+PN NLPI++LETGK  S  S+++NV N Q+YDFE E
Sbjct:    1 MRQFIKILGLLLLTFSAVAQDKDIVVQSMHAEGSTFALLDNKRNLLVTYGYKDQTLKFWNRDTGFLYHTEDLGGYGNDFEINTIHGKTYALVSNTVLVYDNTSFKEIGRYPLGRIHAMHFHQTGGEGYLMVYADDVNGAKALYILNEESQEFVSTQVPVFPGEGEISHFEINSTNSHLWIATNFMENYFYSFATGEFINTKDYVLGLMDDGDAMVGVYSYNEKKASFYRYNYFTKEEQWVQTLQVDLPYATVTPYRGDLKMNSDGKSMWVAPGSSLLVELDANSGYIMGKIYREEEKRAMLSDGDLLYVQSGVEKPYAKFKRYEAQPITEFGFNLLEASNIGALQNNDGTELVATDYYGHPYSFLFNQATTRFTKYAFENPNTVQYNKLLVDSQNKRFYAIPNANLPIRMLETGKPNSVKSLLKNVGNVQYYDFEPE 437          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A2D7VV94_9FLAO (Uncharacterized protein (Fragment) n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2D7VV94_9FLAO)

HSP 1 Score: 524 bits (1349), Expect = 4.750e-179
Identity = 272/322 (84.47%), Postives = 282/322 (87.58%), Query Frame = 1
Query:    1 MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFLQIYPTLR*LPTEAM*RLTKIKITMGGSYGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKR 966
            MKKILL I +LLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPL RIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSH+WIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEK+          ++    +      P     P      + K K ++  + GSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKR
Sbjct:    1 MKKILLKIVLLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLXRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHMWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKKASLYRYNYFTQEEQWSQTVPADLPYATVTPYRGDVAINKDKKSLWVAPGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKR 322          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A2D8FVJ3_9FLAO (Uncharacterized protein n=4 Tax=Flavobacteriaceae TaxID=49546 RepID=A0A2D8FVJ3_9FLAO)

HSP 1 Score: 238 bits (607), Expect = 1.190e-62
Identity = 141/416 (33.89%), Postives = 225/416 (54.09%), Query Frame = 1
Query:   64 QDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFLQIYPTLR*LPTEAM*RLTKIKI--TMGGSYGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYG-HPYSFLFNQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDF 1302
            Q+ VVQS H+E  T + +D+ R +LVTYGY D+TLKFW+  SGLLY T D       +EINEKDGK YVL +NT+ V+   TF+++  Y LGRI SM F ++E  G L+ +A D N   +LY LDE    FL   +P FPGEGEI++FE +      +I++N+ +N+ YSFE  +Y      ++A+ ++GD + A Y     +  ++ + +  RK    + F  I   +  L   ++  +TK K    +     +  L +++A +G ++G    E+    ++ +   +Y Q      + ++K +E  P+  YG +++E + I   QN +  EL+ +  YG   YS + +   T+FTKY     +     K++VD  + K +AV +   PI+V   G A S   VI N  + +H  F
Sbjct:   21 QEFVVQSNHSEAITTSALDSKRGVLVTYGYMDKTLKFWDEKSGLLYKTLDYSNSITQIEINEKDGKAYVLANNTIEVFSTETFEKLKGYSLGRIFSMLFFEIEGQGQLVFFAQDQNYMASLYALDEATGNFLPGNMPPFPGEGEINYFEFSPNGKFAFISSNYGDNFMYSFENSEYKPLNSDIIAMFNNGDVLRAVYDMQASKAVYMRMELASRKVLWNKSF-PIEKEIEGLLMPSIFDVTKSKDGKKLWIQMNALPLTQMNAETGEVLGAFTNEDGAFGVIDNDTHVYAQMSYNGNYGRYKLFENTPLITYGHDVIEPTQIVGYQNGDMVELLFSAQYGTKTYSIMAHPKVTQFTKYNATYRDDFSSAKMIVDPSSDKVFAVTSTIDPIKVFNRGDANSFKDVIENFKDIRHSAF 435          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A2E0YP02_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E0YP02_9FLAO)

HSP 1 Score: 234 bits (597), Expect = 2.490e-61
Identity = 147/442 (33.26%), Postives = 231/442 (52.26%), Query Frame = 1
Query:    1 MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYGYKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYDNTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAKEFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLSTKDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFL--QIYPTLR*L-----PTEAM*RLTKIKITMGGSYGSSLLVELDANSGYIMGKIYREEDKRAMLSDGDLLYVQSGVTKPFAKFKRYEAQPITQYGFNLMEASHIETIQNSNETELVTTDYYGHPYSFLF-NQATTRFTKYAFENANTIQYNKLLVDSENRKFYAVPNGNLPIQVLETGKAKSATSVIRNVANAQHYDF 1302
            MK++LL + V  V ++ +AQ Q+ VVQ  HAE  +Y+ +D  R +LVT+GY D TLKFWN  +GLLY T D       L +N ++GK Y L  NT++V+   TF++I  YPLGRI+S+ F + +  G L ++A D N   +LY LDE+   FL   +P  P + E++         ++++  ++   Y + F   KY+  K   +AL ++GD + + Y Y++ RL      + +R N   R  L  Q +     +     PT A    T            + L ++DA +G I+G   + E    +L  GD +Y Q G T  F K++ Y  +P+ QYG N++E + I T + S   E V +  YG     LF +  TT+ TKY     +     +LL+D  + K Y++ +   PI+V + GKA+S    I N  +A+ +DF
Sbjct:    1 MKRLLLIVIVCCVCVTGMAQ-QEFVVQGNHAEYISYSALDTKRNVLVTFGYTDNTLKFWNEKTGLLYRTIDAENSFSKLVVNSEEGKVYGLAMNTIVVFSTETFEKIKEYPLGRIYSIDFSQFDGQGRLTLFAQDQNYMTSLYALDESKGTFLPASIPPLPVDEEVTTHYFTPNGKYLFVVPSYESYYAFDFAANKYIELKGDYIALFNNGDVLRSIYDYEKSRL------VYQRMNPETRAILWTQTFEDATLMEGLFQPTWADVSFTLDHSAFWVETTMTPLTKIDAQTGKILGSFPKTESIGGVLDAGDYVYAQLGATSKFGKYEPYNIEPLQQYGNNVIEPTKILTHRGSEGLEFVFSTTYGTEVLSLFAHPKTTQLTKYVTNFRDGYSDGELLLDQSSDKVYSITSTIDPIKVFQRGKAESFKDYIDNYRSARQFDF 435          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A2E2J0H9_9FLAO (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2E2J0H9_9FLAO)

HSP 1 Score: 222 bits (566), Expect = 2.780e-57
Identity = 111/257 (43.19%), Postives = 155/257 (60.31%), Query Frame = 3
Query: 1311 KQLMASLGGGALRIVDVANNTESFVKLVGSEIPYGSHMVDLSPSGNYVVYAERTQSGGQFDGQALIYLDYLTKQELWTKTDRYSAAFHINNGAELLLVNGEIQQVEIVDARTGAIKRTFPIDQGKAIKMGELSPNEQYLVFTGYQLPTSVYDVQTGKRVNQFKSSMFDYFDGGFVTETIVAVPASGAIKFIDILENKEVLRMYIFQDDEWIVHTQDGLFDGSQGAWDRVAFANGNQSIPLESVFDNFYTPRLMHKII 2081
            KQL A L    LRIV+     E F K +  +I    + + LSP  N V Y  +     +     L Y D+    E WTK  +Y  AFHI  G ELL+ N    Q+EI+D +TGA+ R+ P D   A     LSPNE+YL++ GY +  +V  + TGK++N FK   +   +G F+T T++A   SGAIKF+DI   KEVLR+Y+F D+ W+ +T +G FDGSQ  W++VAF  G ++IPLESVFD FYTPRL+++++
Sbjct:  439 KQL-ALLYKSGLRIVNTETQAEVFFKPLNIDIGVFKNGMSLSPFNNAVAYTSQEIQADRIAYAKLHYFDFGANTEKWTKEGKYFGAFHIKGGKELLVSNATTNQIEILDTQTGALLRSIPTDFNGAQMDSFLSPNEEYLLYVGYNIGAAVIHIPTGKKINSFKVGNYGKLNGAFITNTVIAYAESGAIKFMDITNLKEVLRLYVFDDESWVAYTPEGQFDGSQEGWEKVAFVKGTETIPLESVFDQFYTPRLLYQVL 694          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A349NKB6_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A349NKB6_9FLAO)

HSP 1 Score: 204 bits (520), Expect = 2.840e-53
Identity = 99/210 (47.14%), Postives = 132/210 (62.86%), Query Frame = 3
Query: 1452 VVYAERTQSGGQFDGQALIYLDYLTKQELWTKTDRYSAAFHINNGAELLLVNGEIQQVEIVDARTGAIKRTFPIDQGKAIKMGELSPNEQYLVFTGYQLPTSVYDVQTGKRVNQFKSSMFDYFDGGFVTETIVAVPASGAIKFIDILENKEVLRMYIFQDDEWIVHTQDGLFDGSQGAWDRVAFANGNQSIPLESVFDNFYTPRLMHKII 2081
            + +A R   G Q     L Y D+  K + W+K  +Y   FHIN G ELL+ N    ++EI+D  TG +KR+        +  G LSPNE YL+  G+     VY + TGK+V  FK + +  FDG FVT TI+A P SG IKFID+L  KE+LR+YIF+D  WI +T DG FDGSQ  WD+VAF    ++IPLESVFD FYTPRL+++++
Sbjct:    1 MAFATREIHGDQIFYDKLNYFDFGAKAQKWSKDGKYFGIFHINGGKELLVCNTTANKIEILDVATGDVKRSIEGHFENFMMDGFLSPNEDYLLLAGFNTGMMVYHIPTGKKVQNFKLNNYGKFDGDFVTNTIIATPESGGIKFIDLLTLKELLRLYIFEDQSWIAYTPDGQFDGSQEGWDKVAFIKNKKTIPLESVFDKFYTPRLLYQVL 210          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A1A9LBX4_9FLAO (Uncharacterized protein n=1 Tax=Aequorivita soesokkakensis TaxID=1385699 RepID=A0A1A9LBX4_9FLAO)

HSP 1 Score: 170 bits (430), Expect = 5.360e-40
Identity = 90/281 (32.03%), Postives = 149/281 (53.02%), Query Frame = 3
Query: 1299 F*VGKQLMASLGGGALRIVDVANNTESFVKLVGSEIPYGSHMVDLSPSGNYVVYAERTQSGGQFD-GQALIYLDYLTKQELWTKTDRYSAAFHINNGAELLLVNGEIQQVEIVDARTGAIKRTFPIDQGKAIKMGELSPNEQYLVFTGYQLPTSVYDVQTGKRVNQFKSSMFDYFDG-GFVTETIVAVPASGAIKFIDILENKEVLRMYIFQDDEWIVHTQDGLFDGSQGAWDRVAFANGNQSIPLESVFDNFYTPRLMHKIINGGTVEKPDRDIKNLKRP 2135
            F    +L+  +    L++++V N          +        +D+SP G  +      +    ++  + L Y +  TK   W+K + Y   FH+  G ELL +N + +  ++ +  +G + R+F I Q   +    L+P++  L+F   ++ T +Y++ TG   ++ K+    Y     FVT+ + A  + G+IKF +     E+LR+ +F D EW+ HT +GLF+GSQ AWDRVAF  G ++IPL+ VFD FYTPRL+  I+ G  +EKP  DI  +K P
Sbjct:  438 FNADSKLLGYVKNNTLQVINVENKQSVATIPFNNVRKADQAFLDISPDGKGIAVGLSDEIVFDYEYKERLDYFNLETKNLAWSKPNSYRNLFHLKGGKELLAINLDTKNADVFNTASGELLRSFTIPQADYLAEFSLNPSQTKLIFFTKEMGTKIYNINTGALESESKNFKELYNARVAFVTDDVYAQASDGSIKFFNTNSPNEILRLILFLDGEWVAHTPEGLFEGSQNAWDRVAFVRGRETIPLDQVFDKFYTPRLLFNILQGEKIEKPTIDIDKIKTP 718          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: UPI0020100F2A (caspase family protein n=1 Tax=Seonamhaeicola sp. ML3 TaxID=2937786 RepID=UPI0020100F2A)

HSP 1 Score: 145 bits (366), Expect = 4.100e-32
Identity = 69/197 (35.03%), Postives = 114/197 (57.87%), Query Frame = 3
Query: 1509 YLDYLTKQELWTKTDRYSAAFHINNGAELLLVNGEIQQVEIVDARTGAIKRTFPIDQGKAIKMGELSPNEQYLVFTGYQLPTSVYDVQTGKRVNQFKSSMFDYFDGGFVTETIVAVPASGAIKFIDILENKEVLRMYIFQDDEWIVHTQDGLFDGSQGAWDRVAFANGNQSIPLESVFDNFYTPRLMHKIINGGTVE 2099
            Y DY  K+ LW +   Y+    I    ++L +N E QQVEI++   G I R F +       +  L+P+E  ++F+ Y+    VYD+++G+ +++    +  +    F+T+ I     +G  +F D++ ++E+LR+Y+F D EW+ HT +GLF+GSQ AW+RV F  G   IPL  +F++FYTP L   I+N   V+
Sbjct:  509 YYDYKNKKLLWQREGEYTNLLFIEEQTKILTLNFEKQQVEIINVSNGEIDRVFKVPDIDFPNL-VLNPSENLIIFSDYKSALKVYDLESGRLISETDKFIDGFTFVKFITDQIYVTLTNGHFRFYDVVTHEEILRLYVFIDGEWLAHTPEGLFEGSQKAWNRVLFTKGADIIPLNQIFNDFYTPNLTSTILNNQKVD 704          
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Match: A0A8J8FA54_9BACT (Uncharacterized protein n=2 Tax=Limnovirga soli TaxID=2656915 RepID=A0A8J8FA54_9BACT)

HSP 1 Score: 87.8 bits (216), Expect = 4.900e-14
Identity = 86/295 (29.15%), Postives = 141/295 (47.80%), Query Frame = 3
Query: 1308 GKQLMASLGGGALRIVDVANNTESFVKLVGS------EIPYGSH--MVDLSPSGNYVV-YAERTQSGGQFDGQALIYLDYLTKQELWTKTDRYSAAFHINNGAELLLVNGEIQQVEIVDARTG--AIKRTFPIDQGKAIKMGELSPNEQYLVFT--GYQLPTS-----VYDVQTGKRVNQFKSSMFDYFDGGFVTETIVAVPAS--GAIKFIDILENKEVLRMYIFQD-DEWIVHTQDGLFDGSQGAWDRVAFANGNQSIPLESVFDNFYTPRLMHKIINGGTVEKPDRDIKNLK 2129
            GK L+A  GG AL + DVAN      KL+ +       + +G++  +  +S  G  +V Y+ +  S G  +G  L Y D  T   LW K+        INN  ++ +V  +   +  VDA TG    ++T P  +   I    +S + + L FT  GY L        V+D+   K +   K   +   +  F+  +     AS     +  DI + KE+  +  F+D ++W+  T DG FD S GA   + +  G   +PLE++++ +YTP+L+ ++I G T + P  DI N+K
Sbjct:  446 GKWLVALDGGKAL-VFDVANK-----KLINNFKTGYYALWFGNNYKIESISSDGKKLVTYSIKENSNG--NGSVLCY-DIATGNILWEKSVIACCFKFINNDKQVFMVRKDQPAMVTVDALTGNTVSEKTLPFQR---IYAANISNDLKKLAFTSVGYNLIADNSYIQVWDIVNNKNLAVLKGHSYIPDELSFLANSNFLFSASDDNTTRIWDIGKQKELGTLITFEDSNDWVFITPDGRFDASPGALQTLYYTKGKDVLPLEALYEQYYTPKLISRLIAGETFD-PVPDIGNIK 727          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1406.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2D8LND2_9FLAO3.730e-25989.43Uncharacterized protein n=2 Tax=Flavobacteriaceae ... [more]
A0A6G6GNX1_9FLAO4.050e-20569.57Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A2D7VV94_9FLAO4.750e-17984.47Uncharacterized protein (Fragment) n=1 Tax=Flavoba... [more]
A0A2D8FVJ3_9FLAO1.190e-6233.89Uncharacterized protein n=4 Tax=Flavobacteriaceae ... [more]
A0A2E0YP02_9FLAO2.490e-6133.26Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A2E2J0H9_9FLAO2.780e-5743.19Uncharacterized protein n=2 Tax=Bacteria TaxID=2 R... [more]
A0A349NKB6_9FLAO2.840e-5347.14Uncharacterized protein n=1 Tax=Flavobacteriaceae ... [more]
A0A1A9LBX4_9FLAO5.360e-4032.03Uncharacterized protein n=1 Tax=Aequorivita soesok... [more]
UPI0020100F2A4.100e-3235.03caspase family protein n=1 Tax=Seonamhaeicola sp. ... [more]
A0A8J8FA54_9BACT4.900e-1429.15Uncharacterized protein n=2 Tax=Limnovirga soli Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1406contigP-littoralis_Contig1406:1935..4239 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size2305
Hectar predicted targeting categorysignal peptide
Exons1
Cds size756
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.1338077-CDS-P-littoralis_Contig1406:1934..26901680789659.1338077-CDS-P-littoralis_Contig1406:1934..2690Pylaiella littoralis U1_48CDSP-littoralis_Contig1406 1935..2690 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789659.146188-UTR-P-littoralis_Contig1406:2690..42391680789659.146188-UTR-P-littoralis_Contig1406:2690..4239Pylaiella littoralis U1_48UTRP-littoralis_Contig1406 2691..4239 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1406.1.1prot_P-littoralis_Contig1406.1.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1406 1935..2690 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1406.1.1

>prot_P-littoralis_Contig1406.1.1 ID=prot_P-littoralis_Contig1406.1.1|Name=mRNA_P-littoralis_Contig1406.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp
MKKILLNIAVLLVTISAIAQNQDIVVQSMHAEGSTYALVDNTRKLLVTYG
YKDQTLKFWNRDSGLLYHTEDLGGYAGDLEINEKDGKTYVLMSNTVLVYD
NTTFKEIGRYPLGRIHSMHFHKVEDLGYLMVYADDVNGAKALYVLDENAK
EFLTTQVPVFPGEGEISHFEINSTNSHIWIATNFMENYFYSFETGKYLST
KDYVLALMDDGDAIIAQYSYDEKRLRFIGIIILRRKNSGRRPFLQIYPTL
R*
back to top

mRNA from alignment at P-littoralis_Contig1406:1935..4239+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1406.1.1 ID=mRNA_P-littoralis_Contig1406.1.1|Name=mRNA_P-littoralis_Contig1406.1.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2305bp|location=Sequence derived from alignment at P-littoralis_Contig1406:1935..4239+ (Pylaiella littoralis U1_48)
ATGAAAAAGATTCTTTTAAATATCGCAGTACTATTGGTGACGATTTCAGC AATAGCACAAAACCAAGACATTGTGGTGCAAAGTATGCACGCAGAAGGCT CAACGTACGCGCTCGTTGACAACACTAGAAAATTATTGGTCACCTATGGT TATAAAGACCAGACCTTAAAATTTTGGAATCGAGATTCTGGCTTGCTCTA CCATACCGAAGATTTGGGTGGCTATGCAGGCGATTTGGAAATCAATGAAA AAGACGGGAAGACCTATGTTTTGATGAGCAATACGGTACTTGTTTACGAT AATACGACCTTTAAAGAAATTGGGCGTTATCCGTTGGGGCGTATTCATTC GATGCACTTTCATAAAGTGGAAGATTTAGGGTATTTAATGGTGTATGCAG ATGATGTAAATGGAGCAAAGGCATTATACGTGCTGGATGAAAATGCCAAA GAATTTTTAACTACACAAGTACCTGTTTTTCCGGGCGAAGGTGAAATCAG CCATTTTGAAATTAACAGTACCAATTCACATATTTGGATTGCCACGAATT TTATGGAAAATTATTTCTATTCGTTTGAGACGGGGAAATATTTAAGCACT AAAGACTATGTGTTGGCTTTGATGGATGACGGGGATGCCATCATAGCACA ATATTCCTACGATGAAAAAAGGCTTCGCTTTATAGGTATAATTATTTTAC GCAGGAAGAACAGTGGTCGCAGACCGTTCCTGCAGATTTACCCTACGCTA CGGTGACTCCCTACAGAGGCGATGTAGCGATTAACAAAGATAAAAATCAC TATGGGTGGCTCCTATGGCAGTAGTTTGTTGGTAGAATTAGATGCCAATT CTGGATATATCATGGGGAAGATATATCGGGAAGAAGATAAACGTGCTATG TTGAGTGACGGTGACTTGCTCTATGTGCAGAGTGGTGTGACCAAGCCATT TGCCAAATTTAAAAGGTACGAAGCACAGCCAATCACCCAATATGGTTTTA ACTTAATGGAAGCCAGCCATATTGAAACCATCCAGAACAGCAATGAAACT GAGTTGGTGACCACAGATTATTATGGGCATCCGTATTCGTTTTTGTTCAA CCAAGCTACCACGCGGTTTACAAAATATGCTTTTGAAAATGCTAATACCA TTCAGTATAACAAGCTATTGGTAGATTCGGAAAATAGAAAATTTTATGCG GTCCCCAACGGAAACCTACCCATACAGGTTTTAGAGACTGGAAAGGCCAA AAGCGCAACGTCGGTCATACGAAATGTTGCCAATGCACAGCATTACGATT TTGAGTAGGAAAACAATTGATGGCCTCTTTGGGAGGAGGTGCTTTGCGAA TTGTTGATGTAGCCAACAACACAGAATCTTTTGTAAAACTTGTAGGGAGT GAAATCCCTTATGGCAGCCACATGGTAGACCTTTCACCTTCGGGAAATTA TGTGGTGTACGCAGAACGAACCCAAAGTGGGGGTCAGTTTGACGGACAAG CATTGATATATCTGGATTATTTGACCAAGCAAGAGTTGTGGACCAAAACA GATCGTTATTCGGCTGCTTTCCATATTAACAATGGAGCAGAGTTATTGCT GGTGAATGGTGAGATTCAACAAGTGGAAATCGTCGATGCTCGAACGGGTG CCATAAAAAGAACCTTTCCTATAGATCAAGGAAAAGCGATCAAGATGGGC GAATTGTCACCCAACGAACAATATCTCGTTTTTACGGGCTACCAATTACC AACCTCGGTGTATGATGTACAAACAGGCAAGCGGGTGAACCAGTTTAAAA GTAGTATGTTCGACTATTTTGACGGCGGGTTTGTTACTGAAACAATTGTA GCAGTGCCTGCATCTGGGGCTATAAAATTTATCGACATCCTTGAAAATAA GGAAGTATTACGAATGTATATTTTTCAAGATGACGAATGGATTGTACATA CCCAAGACGGATTGTTCGATGGTTCCCAAGGTGCGTGGGATCGCGTTGCG TTTGCCAATGGAAACCAAAGTATTCCTTTAGAAAGTGTGTTCGATAATTT TTACACTCCGCGGTTGATGCATAAAATTATCAATGGCGGCACGGTAGAAA AACCAGATCGCGATATCAAAAACCTAAAAAGGCCCCAACAGTTCAAATTT CCTATAAAGAAGGATCTAGAAATTTAGTGGTTGAAGACGACAAAAAAACC ATTACTACCCAAAATGGGACTGGAGAAATAACACTGACAGGAAATCCTAA CGGCGACAAAATTGTAGAATTGCGCTTGTACCAAAACGGTAAATTGGTTA GCAAT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig1406:1935..4239+

>mRNA_P-littoralis_Contig1406.1.1 ID=mRNA_P-littoralis_Contig1406.1.1|Name=mRNA_P-littoralis_Contig1406.1.1|organism=Pylaiella littoralis U1_48|type=CDS|length=756bp|location=Sequence derived from alignment at P-littoralis_Contig1406:1935..4239+ (Pylaiella littoralis U1_48)
ATGAAAAAGATTCTTTTAAATATCGCAGTACTATTGGTGACGATTTCAGC
AATAGCACAAAACCAAGACATTGTGGTGCAAAGTATGCACGCAGAAGGCT
CAACGTACGCGCTCGTTGACAACACTAGAAAATTATTGGTCACCTATGGT
TATAAAGACCAGACCTTAAAATTTTGGAATCGAGATTCTGGCTTGCTCTA
CCATACCGAAGATTTGGGTGGCTATGCAGGCGATTTGGAAATCAATGAAA
AAGACGGGAAGACCTATGTTTTGATGAGCAATACGGTACTTGTTTACGAT
AATACGACCTTTAAAGAAATTGGGCGTTATCCGTTGGGGCGTATTCATTC
GATGCACTTTCATAAAGTGGAAGATTTAGGGTATTTAATGGTGTATGCAG
ATGATGTAAATGGAGCAAAGGCATTATACGTGCTGGATGAAAATGCCAAA
GAATTTTTAACTACACAAGTACCTGTTTTTCCGGGCGAAGGTGAAATCAG
CCATTTTGAAATTAACAGTACCAATTCACATATTTGGATTGCCACGAATT
TTATGGAAAATTATTTCTATTCGTTTGAGACGGGGAAATATTTAAGCACT
AAAGACTATGTGTTGGCTTTGATGGATGACGGGGATGCCATCATAGCACA
ATATTCCTACGATGAAAAAAGGCTTCGCTTTATAGGTATAATTATTTTAC
GCAGGAAGAACAGTGGTCGCAGACCGTTCCTGCAGATTTACCCTACGCTA
CGGTGA
back to top