mRNA_P-littoralis_Contig1402.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JQM6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM6_9PHAE) HSP 1 Score: 245 bits (625), Expect = 4.390e-78 Identity = 115/160 (71.88%), Postives = 132/160 (82.50%), Query Frame = 3
Query: 270 FHGQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGM 749
F G+ G T+A+EVTVDH GRA+ VT GFTGATNDKT +RYD+ V IR Y +REYKLRK +GTE TR+GC+LI+DN YHEWVTL+APSKYP D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+FDG+
Sbjct: 10 FTGKEGFPTIAYEVTVDHVGRALAVTNGFTGATNDKTIIRYDSGVNNIRTESQYTEREYKLRKVNGTERTRRGCFLIMDNWYHEWVTLIAPSKYPQSNKDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGL 169
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JTC6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC6_9PHAE) HSP 1 Score: 225 bits (573), Expect = 1.970e-70 Identity = 102/159 (64.15%), Postives = 128/159 (80.50%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGMS 752
G+ G T+A++VTVDH R + VT GFTG+TNDK+ +RYD AV IR + +Y ++E+ + +ADGT + KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KG FRILKL + YH +EDIDN+FFTCCILHNMLHS+D S
Sbjct: 12 GKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGLFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKS 170
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.630e-68 Identity = 103/159 (64.78%), Postives = 129/159 (81.13%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGMS 752
G+ G T+A++VTVDH R + VT GFTG+TNDK+ +RYD AV IR + +Y ++E+ + +ADGT + KGCYL+VDNGYH+WVTL+ PSKYP D +D AFSK LE+VRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILHNMLHS+D S
Sbjct: 253 GKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKS 411
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: D7FSK2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK2_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.120e-65 Identity = 99/158 (62.66%), Postives = 123/158 (77.85%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGM 749
G+ G T+ ++VTVDHAGRAI VT+GFTG+TNDKT V +DAAV+ IR +K Y ++ + + DGT T KGCY++VDNGYH+W L+ PSKYP +D FSK LE+VRKDVECFFGILKGR RIL L + + +E IDN+FFTCCILHNMLH+FDGM
Sbjct: 55 GKEGFPTIGYQVTVDHAGRAIAVTEGFTGSTNDKTTVCWDAAVEKIRTDKQYTEKTFDVYNQDGTTTTLKGCYVLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRLRILMLAMAFQSQERIDNVFFTCCILHNMLHTFDGM 212
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JUX7_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUX7_9PHAE) HSP 1 Score: 215 bits (548), Expect = 1.660e-65 Identity = 102/158 (64.56%), Postives = 121/158 (76.58%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGM 749
G+ T+A++VTVDHA RAI VT+GFTG+TNDKT V +DAAV IR +K Y ++ + L DGT T KGCY + DNGYH+W L+ PSKYP DD FSK LE+VRKDVECFFGILKGRFRILKL + Y +E IDN+FFTCCILHNMLH+FDGM
Sbjct: 100 GKDWFPTIAYQVTVDHASRAIAVTEGFTGSTNDKTIVCWDAAVDKIRTDKQYTEKTFDLYNEDGTTTTLKGCYFLDDNGYHKWQILIEPSKYPLSEDDLLFSKRLESVRKDVECFFGILKGRFRILKLAMAYQSQERIDNVFFTCCILHNMLHTFDGM 257
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 223 bits (569), Expect = 1.840e-65 Identity = 118/200 (59.00%), Postives = 138/200 (69.00%), Query Frame = 3
Query: 228 SRRLGHVSVHPWPF-----FHGQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNG----------YHE---------------WVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHS 737
S + H+ + PF F G+ G T+A EVTVDHAGRA+ VT GFTGATNDKT +RYD+ V IR Y +REYKLRKA+GTE TR+GC+LIVDNG +H+ WVTL+APSKYP +D AFS+ LE+VRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILHNMLH+
Sbjct: 287 STNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 486
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 217 bits (553), Expect = 2.550e-65 Identity = 102/157 (64.97%), Postives = 123/157 (78.34%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDG 746
G+ G T+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD
Sbjct: 178 GKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 334
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 215 bits (548), Expect = 5.150e-65 Identity = 108/179 (60.34%), Postives = 131/179 (73.18%), Query Frame = 3
Query: 228 SRRLGHVSVHPWPF-----FHGQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGM 749
S + H+ + PF F G+ G T+A++VTVDH GR + VT GFTGATNDKT +RYD+ V IR Y +REYKLRKA+GT+ R+GC+LIVDNGYHEWVTL+APSKYP +D AFS+ LE+VRKDV CF RILKLR+ YH RE +DNIFFTCCILHNMLH+FDG+
Sbjct: 110 STDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGL 280
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 217 bits (553), Expect = 2.410e-64 Identity = 102/157 (64.97%), Postives = 123/157 (78.34%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDG 746
G+ G T+AF+VTVDH+GR + VT+GFTGATNDKT +RYD AV IR + VY +++YKL DG +F KGCYL+VDNGYH+W TL+ PSK P D D FSK LE+ RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILHNMLHSFD
Sbjct: 269 GKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDN 425
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 211 bits (537), Expect = 4.150e-63 Identity = 98/158 (62.03%), Postives = 122/158 (77.22%), Query Frame = 3
Query: 276 GQGGVSTLAFEVTVDHAGRAIGVTQGFTGATNDKTNVRYDAAVQTIRNNKVYKDREYKLRKADGTEFTRKGCYLIVDNGYHEWVTLMAPSKYPNDVDDAAFSKMLETVRKDVECFFGILKGRFRILKLRLVYHCREDIDNIFFTCCILHNMLHSFDGM 749
G+ GV T+ ++VTV+HAGRAI VT+GFT +TNDKT V +DA V+ IR + Y ++ + + DGT T KGCYL+VDNGYH+W LM P+KYP +D FSK LE+VRKDVECFFGILKG FRI K+ + YH +E IDN+FFTCCILHNMLH+FDGM
Sbjct: 195 GKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGM 352 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1402.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1402.8.1 >prot_P-littoralis_Contig1402.8.1 ID=prot_P-littoralis_Contig1402.8.1|Name=mRNA_P-littoralis_Contig1402.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=166bp FALQILGRGNCFDDISQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTback to top mRNA from alignment at P-littoralis_Contig1402:10283..11602- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1402.8.1 ID=mRNA_P-littoralis_Contig1402.8.1|Name=mRNA_P-littoralis_Contig1402.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1320bp|location=Sequence derived from alignment at P-littoralis_Contig1402:10283..11602- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1402:10283..11602- >mRNA_P-littoralis_Contig1402.8.1 ID=mRNA_P-littoralis_Contig1402.8.1|Name=mRNA_P-littoralis_Contig1402.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=498bp|location=Sequence derived from alignment at P-littoralis_Contig1402:10283..11602- (Pylaiella littoralis U1_48)back to top |