prot_P-littoralis_Contig1402.1.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1402.1.1
Unique Nameprot_P-littoralis_Contig1402.1.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length85
Homology
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BLAST of mRNA_P-littoralis_Contig1402.1.1 vs. uniprot
Match: A0A6H5KNU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU4_9PHAE)

HSP 1 Score: 49.3 bits (116), Expect = 7.680e-5
Identity = 32/89 (35.96%), Postives = 40/89 (44.94%), Query Frame = 0 
Query:    2 KDTPCGKLSGGRVVGLSKHHDG-----KQXXXXXXXXXXXXXXXXXXXXXXXXNYGSDEEVGGGVDECDTRGAATNVEKEQGAHYRKAS 85
            K   CGK +GGRV+GL  HHDG     K                         N+GSD+E+   VDE  T GA     K Q +HY++AS
Sbjct:   87 KGKRCGKAAGGRVLGLCGHHDGTRKRLKAAGTTAAGTTAAAGLEVGAGVDDQANFGSDDELXXXVDELQTAGADAQQSKLQHSHYQRAS 175
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1402.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNU4_9PHAE7.680e-535.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1402contigP-littoralis_Contig1402:3529..3783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1402.1.1mRNA_P-littoralis_Contig1402.1.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1402 3527..3783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1402.1.1 ID=prot_P-littoralis_Contig1402.1.1|Name=mRNA_P-littoralis_Contig1402.1.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=85bp
KKDTPCGKLSGGRVVGLSKHHDGKQQRRRTPAAQGGEAQAGAAGGDDESN
YGSDEEVGGGVDECDTRGAATNVEKEQGAHYRKAS
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