prot_P-littoralis_Contig140.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig140.29.1
Unique Nameprot_P-littoralis_Contig140.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length111
Homology
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BLAST of mRNA_P-littoralis_Contig140.29.1 vs. uniprot
Match: A0A6H5KDN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDN6_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.070e-25
Identity = 62/114 (54.39%), Postives = 78/114 (68.42%), Query Frame = 0 
Query:    1 MGLTRQPGFEMSKTIGALLKEEITRAFPKELGPCVEV---EQQEMEKSVAKIEGAQRDALAYSGQLGATHEAVIALLAARPPCFEEDLPRFTPDTTVPSGGEPTTGVTDDVEVD 111
            M L  QPG EMS  +G  L++E+ RA P    P +E    +++++  S A    AQ++ALAYS QL A+HEAVI LLAARPPCF  D+PR  PD TVPSGGEP +GV+DDVE D
Sbjct:  212 MRLRCQPGLEMSNAMGGRLQDEMVRALP----PALEARGSDERQVSASRAAFSIAQKEALAYSCQLSASHEAVITLLAARPPCFTPDVPRRAPDPTVPSGGEPPSGVSDDVERD 321
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BLAST of mRNA_P-littoralis_Contig140.29.1 vs. uniprot
Match: D8LEP9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP9_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 1.980e-21
Identity = 58/111 (52.25%), Postives = 67/111 (60.36%), Query Frame = 0 
Query:    1 MGLTRQPGFEMSKTIGALLKEEITRAFPKELGPCVEVEQQEMEKSVAKIEGAQRDALAYSGQLGATHEAVIALLAARPPCFEEDLPRFTPDTTVPSGGEPTTGVTDDVEVD 111
            MGL  QPG EMSKT+G  L++E+ RA P    P +E    +                    QL ATHEAVI LLAARPPCF  D+PR TPD TVPSGGEP +GV+DDVE D
Sbjct:  212 MGLRCQPGLEMSKTMGGRLQDEMVRALP----PALEARGSD------------------ERQLSATHEAVITLLAARPPCFTPDVPRRTPDPTVPSGGEPPSGVSDDVERD 300
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KDN6_9PHAE6.070e-2554.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP9_ECTSI1.980e-2152.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 35..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig140contigP-littoralis_Contig140:155663..155995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig140.29.1mRNA_P-littoralis_Contig140.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig140 155637..155995 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig140.29.1 ID=prot_P-littoralis_Contig140.29.1|Name=mRNA_P-littoralis_Contig140.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=111bp
MGLTRQPGFEMSKTIGALLKEEITRAFPKELGPCVEVEQQEMEKSVAKIE
GAQRDALAYSGQLGATHEAVIALLAARPPCFEEDLPRFTPDTTVPSGGEP
TTGVTDDVEVD
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