mRNA_P-littoralis_Contig140.18.6 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A6H5KDI3_9PHAE (SET domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI3_9PHAE) HSP 1 Score: 514 bits (1324), Expect = 1.700e-169 Identity = 315/587 (53.66%), Postives = 371/587 (63.20%), Query Frame = 2
Query: 32 MCSLKQHDEDTSGVADAVSVGMTEGKGRGLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRR--------HDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSK------GLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRD-------APVP----DDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLREL----SEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDD--GIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAA----AKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEELA 1687
M + Q D + A AVSVG+T+G+GRGLFA++ MK G+TILIERPLVAMQSLDNA DVTVCRNCLGFAGDVISQL++L+G+ R ECL R++ R HD TA AHK LSGLYEC+ GCGEVYCSP CRSEH ERCHRLLCVGPVP+E AQ HPLV FRVHAMQTNEIFLLVGEVMA+IA+AF++ G ++A APFADFVQE WW+VAV RD + +P +D CSG N A L TLRALC ESSALLR AFA LGPLPAPL+ L E FGRVVGMFEQNNVG+RAPSP+P+VLREL SEG + R ++ L A LVGE+++ ++EE LQ+ C +P V G D AL E G G +A L++ + G GD+ +F PLDGTALY L+CCMNHSCRPNC+VRYPGRRR + +AA A A PLVA+VVLLEDV AG+ELTQSY+ R+M L ER+ ALEDYGF+CTC RCSEE A
Sbjct: 1 MSLIGQQDCNGEAAAAAVSVGLTDGRGRGLFATADMKAGATILIERPLVAMQSLDNALDVTVCRNCLGFAGDVISQLDILTGLNRPECLARYKARQRCWDSNGHDDQTAP--AHK-----LSGLYECLGGCGEVYCSPRCRSEHWERCHRLLCVGPVPDEEAQSHPLVEFRVHAMQTNEIFLLVGEVMAQIATAFTEKVRAKPGGXXXXXXXXXXXXXXXDVDDEISAARAPFADFVQEPWWDVAVARDGRDATDGSSLPPCTSEDGCSGDENSCAA-------------ALPGTLRALCGESSALLRRAFARALGPLPAPLEQALMTEMFGRVVGMFEQNNVGVRAPSPIPEVLRELLSASSEGNDDCPTRGTSRDVLGEVARLVGEVMDEEY----EEEEEGDLQM----------------ICPVAPRKCVPG---DGALEESGM--------GQGEAETILKAAIGGDEEGDEVVSLFPPLDGTALYPLICCMNHSCRPNCLVRYPGRRREKKATVDPENAAVASAASADPLVADVVLLEDVPAGEELTQSYVNRDMGLVERRDALEDYGFLCTCPRCSEEEA 536
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: D8LEQ6_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEQ6_ECTSI) HSP 1 Score: 477 bits (1228), Expect = 1.100e-155 Identity = 298/541 (55.08%), Postives = 341/541 (63.03%), Query Frame = 2
Query: 170 PLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRR--------HDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSD-SAQRTLAATVAPFADFVQERWWEVAVPRDAP-----------VPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLREL----SEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGS-GDD--GIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRG----AGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEELAALSS 1699
PLVAMQSLDNAQDVTVCRNCLGFAGDVISQL+ L+G+ R ECL RH+ R +D TA AH+ LSGLYEC+ GCGEVYCSP CRSEH ERCHRLLCVGPVP+E AQ HPLV FR+HAMQTNEIFLLVGEVMA+IA+AF++ V D D ++A APFADFVQE WW+VAV RD PDD C+G N A A AA L TLRALC ESSALLR AFA ++GPLPAPL+ L AE FGRVVGMFEQNNVGIRAPSP+P+VLREL SEG R +E L A LVGE+++ D+ E G D C SP + V+G D AL G G +A L+ +DG G G++ +F PLDGTALY L+CCMNHSCRPNC+VRYPGRRR A + G A A PLVA++VLLEDV AG+ELTQSY+TREM L ER+ ALEDYGF CTC RC EE A SS
Sbjct: 13 PLVAMQSLDNAQDVTVCRNCLGFAGDVISQLDNLTGLNRPECLARHKARQRCSKSNGYDDQTAP--AHE-----LSGLYECLGGCGEVYCSPRCRSEHWERCHRLLCVGPVPDEEAQSHPLVEFRIHAMQTNEIFLLVGEVMAQIATAFTE---KVREKPGADGSGGDLDVDDEISAARAPFADFVQEPWWDVAVARDGRDKTDGSSPPPCTPDDGCNGDENVCA------AAAA-----LPGTLRALCGESSALLRRAFARSVGPLPAPLEQALTAEMFGRVVGMFEQNNVGIRAPSPIPEVLRELLSASSEGDSDDATRGISREVLGEVAQLVGEVMD------DEYEXXXXXXXDEG---------DLPMICRVSPRTFVAG---DDALEGSGM--------GPGEAETILKVAMDGGGEEGEEVVSLFPPLDGTALYPLICCMNHSCRPNCLVRYPGRRREKKATADPEKAAGAGAGSADPLVAQLVLLEDVPAGEELTQSYVTREMGLVERREALEDYGFFCTCPRCLEEEAMASS 506
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A835Z6Z6_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Z6_9STRA) HSP 1 Score: 218 bits (556), Expect = 3.400e-58 Identity = 185/550 (33.64%), Postives = 231/550 (42.00%), Query Frame = 2
Query: 158 LIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKR--HQRRHDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYC---------------------------------SPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFS---KGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGC--CGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEELA 1687
++ RPL MQ+L N Q+V VCR C+ F G QLE+L G R +CL+ H + T TAE + G LS + C CGEV C S C + H R HR LCVG V E A HPLV FR HA+ TNEIFLLV EV+A +G P A +AP+A FV+E WWEVAV R AG A A+ L TLR L ES L L E+ R +G FEQNNVG+RA SPL A +AL + DD + G ED C C GF +G + GG+ A +L +L+ Y + D +F PLDGTALYSL+CCMNHSC P C ++Y G GAG ++ PL A +V D++AG+EL QSYI L ER ALE+YGF C C+RC+ + A
Sbjct: 30 ILRRPLAVMQTLSNVQEVMVCRECMAFVGTTRMQLELLRGRGRMQCLEAALHAQAQGTATAE------EEGFLSDIVPCAGNCGEVDCILNTQLEHVIKPXXXXXXXXXXXXXXXXXXXXXSAACAALHWRRSHRRLCVGGVSEAEADAHPLVRFRRHAVATNEIFLLVAEVVADQLGRLETNPEGGPE--------------------AALAPYAVFVREPWWEVAVDR--------------------AGAAATAA----LRVTLRRLVAESXXXXXXXXXXXXXXXXXXXXL-LEPEHLARTIGTFEQNNVGVRAASPLAAAF------AAAXXXXXXXXDALPAVRAAXXXXXXMIAAAAYDDGGSDGXXXXXXXXXXXXXGED-CACAECDDDDTGGQGGF--------QGXXXXGMSDGGGEAAALSLVQILEEYDA--DALFTPLDGTALYSLICCMNHSCDPCCEIKYVG---GAGAAN----------PLRAAIVAKRDIAAGEELFQSYIDAAAPLSERAAALEEYGFACDCARCAADAA 498
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A4D9D6X6_9STRA (SET domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D6X6_9STRA) HSP 1 Score: 204 bits (519), Expect = 6.460e-54 Identity = 169/514 (32.88%), Postives = 232/514 (45.14%), Query Frame = 2
Query: 182 MQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRRHDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAP----LQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKVAAGLVGEIVEAHK-----------GCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYI-TREMDLGERKRALEDYGFVCTCSRCS 1675
MQSLDN Q V C C F G L +L+ L + ++ E A L+ L C CGE+YCS +CR EH +R HRLLCVG +PE A HPLV +++HA++TNEIFLLV +V+A + + F +S L+A ++PF DFVQ WW+VA D PV D D LR L + ++ LLR A G A ++ + + V+GMFEQNNVGIR + L L + + D++Q L+ L+G I+E + D E C + G GA PP VS + P PS ALA + + L S IF+ +DGTAL SL+CCMNHSC+ NC VR+ G GA PL+AE+V +E + G EL QSYI + + +R+ +L++YGF+C C+ CS
Sbjct: 1 MQSLDNRQYVPACGACFCFIGTCRQHLMLLAEAGDRSALMEEE---ESRRMEAEAATFPGAVLAPLVPCTMRCGEMYCSQKCREEHWDRGHRLLCVGHIPEHEAGSHPLVQYKMHALRTNEIFLLVADVVALVLTRF------------------ESNGGDLSAALSPFRDFVQRPWWDVATNPD-PVRDTSA-----------------------FQDMLRGLVKVAADLLRQALLTHPGAPCATYCGSVESIVSPDFVAAVIGMFEQNNVGIRRETVLSSF---LVDHLMPNCTTDSRQVYLQ----LLGRILEDWEEGXXXXXXXXXXAPDGGNEMCVADSGISGADANGHEHGHHQHLGAVPPCRVS---------SRLPPASPSS------ALALVEACL--AKSQTSEIFSAVDGTALLSLICCMNHSCQANCEVRWVGGVGGA--------------PLMAELVAMEHLPGGGELFQSYIRVQGTSVEDRRTSLKEYGFICQCALCS 431
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: F0XYZ4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ4_AURAN) HSP 1 Score: 186 bits (473), Expect = 1.810e-44 Identity = 188/611 (30.77%), Postives = 236/611 (38.63%), Query Frame = 2
Query: 59 DTSGVADAVSVGMTEG--------KGRGLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFA--GDVISQLEVLSGIPRHECLKRHQRRHDTDTAEPTAHKKQLGRLSG-LYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELS--------------EGGEASVRRDAKQE---ALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPS-----------KEEGGDDALATLRSVLDGYGSGDDGI------------------------FAPLDGTALYSLVCCMNHSCRPNCVVRY-----PGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEELA 1687
DTS ADA G GRGLFA+ G TIL+E PLVAMQ L N VC CL F G + + PR A + R G + C DGCGE+YCS CR H RCHR LCVGPV E A PLV +++ A ++NEI L +V +A+A + G A A F F + W V A DD G LL + LR LC +++ LLR A A A + E R+VG FEQNNVG+R PL D +GG +V R A E L A G V + + C+ C + ++ PE V D A E G P+ + EG D+ + L G DDG PL+GTALYS +CC NH+C +C V Y PG G GR FG PL A +V V+AGDELT +Y+ + ER+ AL DYGF+C CSRC E +A
Sbjct: 656 DTSKAADATDATDMSGVRVERSPLHGRGLFAARDFAAGETILVEAPLVAMQDLANRHAALVCGECLAFLDLGRDLLEAVAAGASPR------------------VAADAAVARGGGPVARCADGCGELYCSAACRDAHRRRCHRALCVGPVAEADAAADPLVRYKILATESNEILFLAADV---VAAALADG-----------------------AAAAAFLPFTRVPWDRVVADAAALRGDDARDGA-------------------LLGEALRRLCGDAAPLLRDALAARGFANAADVT----PEWLARIVGTFEQNNVGVRLRHPLDDXXXXXXXXXXXXXXXXXXXXDGG--AVARAASLEDVDRLAAAPGAVAVVKFSAAWCAP-----CRAMAPAFAALAEALPE------ARFVAVDVDEVPDAAARFEAG--ALPTFVLLRDGDELARVEGADERALRAQLALAGCPPPDDGDADXXXXXXXXXXXXXXXXXGGAYGMPPLEGTALYSTICCANHACDQSCDVLYAAPSEPGGEPGPGR---FG------APLRASLVARRAVAAGDELTIAYVDTDAPWQERRAALADYGFLCRCSRCLEPVA 1175
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A7S3M3P4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M3P4_9STRA) HSP 1 Score: 150 bits (380), Expect = 4.030e-35 Identity = 135/470 (28.72%), Postives = 194/470 (41.28%), Query Frame = 2
Query: 116 GLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRRHDTDTAEPTAHKKQLGRLSG---LYECIDGCGEVYCSPECRSEH-SERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVA--PFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEA-LKVAAGLVGEIVEAHKGCSDDDEEACG-------------LQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRY 1465
G+ A ++ G +L E+P +Q+L N + V VC CL G + QL VL G + LK E + L S + C CGEVYCS +CR H S + H+ LC G + E+ A DHPL+ F++HAM TNEIFL+V +V A + +D S + +A + P + +V+E WW+ A+ P A S L+ DT L E L + L E R +GMFEQNNVG++ +PL + + + G ++ DA A + AA + + +E C D+D CG + + + + E G+ A ME P E L LR ++D G D +F PLDGTA Y+L+C +NHSC PN V Y
Sbjct: 24 GVRADVSIPQGDVVLQEKPFHFLQTLPNRKSVAVCTTCLKCLGPLSMQLGVLQGTVSKQNLK-----------EEIGNFMLLPNESSSCQVVSCSCNCGEVYCSEQCREHHWSVKGHKFLCTGLITEDEADDHPLINFKIHAMTTNEIFLMVADVFASMCC-------------HLDSLVSTGVELNVAFDIVARPLSGYVRELWWDAAITPKGYKPL-----------------AFKKSLKTLVKDTYELLSE------------VLQLEERGYSVLLSEEYMSRTIGMFEQNNVGVQMKTPLAEYVENIVSG---AMTADAPTLAFIADAATQILDNIEDDDMCLDED---CGEGXXXXXXXXXXXXXXTGSDMEDENTAEQGE----------------TSAAMETSLAAGPVDEN-----LTALRELIDEQGM--DTLFPPLDGTAFYALICRINHSCDPNVRVVY 411
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A7S4A9H4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A9H4_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.830e-33 Identity = 157/578 (27.16%), Postives = 231/578 (39.97%), Query Frame = 2
Query: 110 GRGLFASSAMKVGSTILIERPLVAMQSLDNAQD-VTVCRNCLGFAGDVISQLEVLSGIPRHECLKR-------HQRRHDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSE-RCHRLLCVGPVPEE------------------GAQDH--------------------PLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKV--AAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGD-----DGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEE 1681
GR L AS+ ++ + I +ERP++AMQS N + VC C+ F G + V+S CL+ R ++ D + + +G LY C CG +YCS EC+ + + H+ LC G +P+ G +D PL+ F+VHA TNEIFLLV + RI +P + D T + + DF WW+V + + + + N+ GG L D L+ LC+ES + L L LT R++G EQN +GIR L + ++ +R + E ++ AG++G+ + DDD + C + G + + +G C DD A L S+ SG D IF PLDG + YS+ MNHSC PN ++ Y + RG GR PLVA VV L+D++ G+EL SYI ER+ AL +YGF CTCS+C +E
Sbjct: 20 GRRLIASADIRKDNLIFVERPVIAMQSTGNVHEGALVCSYCMAFCGIPEQCIRVISDP---SCLEEITTKYSSQSRINEEDNGD--VNNSVIGDPHALYCCRHNCGHIYCSLECQQDDWKWGGHKELCTGMIPDPDEPTSNQEQLQLGTNTLTGIEDEYVNDGLSPIESVDDATTPIDPLLQFKVHARNTNEIFLLVATWLVRI---LKHDIPYHD----------DDNMNTHS-----YTDFQMNTWWDVKAKEEEILKSKQEDSEEIYEKDNDLGGES-------LEDILKELCKESHSYLSQTLKTRLPQSQDSPWLT--PVGMARLIGSLEQNCLGIRRKHALQRNIM-----CDSDLRHEFHPELIRCLEGAGMIGDGDDKF----DDDSDPCDEDDNDGDIDTN--------------------LDVNNTGAYEGADECEGSNYSPDDIAAFLASLTQDLTSGCVFDEWDEIFRPLDGVSHYSITTKMNHSCDPNVILVY--KTRGWGRDH----------PLVAYVVALKDIAEGEELAISYIDSGDPYEERQAALANYGFSCTCSKCKQE 524
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A8K1FIG5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FIG5_PYTOL) HSP 1 Score: 133 bits (334), Expect = 4.010e-29 Identity = 147/558 (26.34%), Postives = 207/558 (37.10%), Query Frame = 2
Query: 77 DAVSVGMT-EGKGRGLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPR-----HECLKRHQRRHDTDTAEPTAHKKQLGRLSGLYECIDG-----CGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDH--PLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALC----------EESSALLRSAFALTLGPLPAPLQLTLGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEE 1681
DA+ G E KG+ ++A A K G I ERP VAMQ DN C +C +I E + + ++ K D + K ++ CG +YCS +C+ E+ H ++C A D+ P+ + H + TNEIF L G+V+ARI F L P A F QE WWEV D P + GLL TL E++ L R + LG L L FG VVGMFE NN+ + P + L E E D K+E V + ++ A K ++ + HE+ +G+ C G D A A + +D G + F ++GTAL+S +C MNHSC PNC V Y R G A+V ++D++ GDEL SYI + D+ ER+ L +Y F+C C+RC EE
Sbjct: 24 DAIVCGFAGEHKGKAIYADKAFKAGEAIWSERPFVAMQHEDNKDFADCCEHCFV---SLIDSKEAWEHVEQANEGENDVAKFEDFEGAIDWLQKQGGKSDEESYFNVFRLAKNKVQCVCGVLYCSEKCKKAAYEQQHAIMCTR------ADDNSTPMGHYINHTLVTNEIFQLAGKVIARILLRFIS-------------------THDLGYARQPVAMFCQEPWWEVVTSEDDLEPGQTMEEYKD-------------CFKGLLMQTLEHFMVGLRDNLERMEKNDELNRLSVDAVLGSCADVLTLDF----FGNVVGMFEMNNISMEIDHPFHTLGEALLESSE-----DEKREIPAV----LNKVRIALKNYAE--------KYQHSHER-----HEGEECSG------------DHAHXXXXXXXXXXXXXXXXXAEGETCAEIDECCDGCEEYFVGVEGTALFSTICTMNHSCDPNCTVIYT--RDGE-----------------AQVFAVQDINKGDELCISYIDVDQDIKERQECLREYQFICQCARCEEE 483
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A1V9Y511_9STRA (SET domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y511_9STRA) HSP 1 Score: 129 bits (324), Expect = 3.350e-28 Identity = 149/531 (28.06%), Postives = 189/531 (35.59%), Query Frame = 2
Query: 104 GKGRGLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRRHDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAAS----TDGLLADTLRALCEESSALLRSAFALTL--GPLPAPLQLT--LGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRC 1672
GKG+ LFA+ A G + E P VAMQ + N V C NC G + QL + H A P + + +C CG VYCS CRS ER H +LC G D P F HA+ TNEIFLL +V+ARI A++K + LAA P F + WWEV P+D G+ + +A + DGL +T E S F +L + A L E F VVGMFE NN+ + PL L EL E SDD E A L +++ V + DD +D + LDGTAL+SLVC MNHSC PN V Y +S G +A VV L + DEL +YI E D+ R L +Y FVC C RC
Sbjct: 25 GKGKALFATKAFAPGEPVFSEMPYVAMQHIANQALVQACENCHVIVGSIEQQLAHVL--------------HVEVGAVPPLPNQIADKAVAQGKCACACGAVYCSKACRSAAWERYHCVLCTGH------PDTPFHDFVQHAIDTNEIFLLAAQVLARIVVAYAK-------------------DQNLAAARRPVDMFCKLPWWEVVA-----SPEDLEEGQTMEDYYDIFKHLLAQTFELFMDGLRFNTAHLALHEPHPDDESEFMASLVWDNVVADCMAAGVLSVEFFATVVGMFEMNNISMEVRHPL-SYLAELYED-------------------------------SDDAEVAAWLADVQTQVRAQ-----------------VKLYTDDSXXXX-------------------XXXXXXXXXXXEDVCYPDLDGTALFSLVCTMNHSCEPNVAVCY----------ESNG---------LATVVALTPIQEHDELQIAYIETEQDVNARAHDLSEYKFVCQCPRC 424
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Match: A0A1W0A9P2_9STRA (SET domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9P2_9STRA) HSP 1 Score: 122 bits (306), Expect = 6.420e-26 Identity = 139/537 (25.88%), Postives = 194/537 (36.13%), Query Frame = 2
Query: 83 VSVGMTEGKGRGLFASSAMKVGSTILIERPLVAMQSLDNAQDVTVCRNCLGFAGDVISQLEVLSGIPRHECLKRHQRRHDTDTAEPTAHKKQLGRLSGLYECIDGCGEVYCSPECRSEHSERCHRLLCVGPVPEEGAQDHPLVAFRVHAMQTNEIFLLVGEVMARIASAFSKGLPSVEAAASVDKCSSDSAQRTLAATVAPFADFVQERWWEVAVPRDAPVPDDECSGKNNGAAVNNAGGAVAASTDGLLADTLRALCEESSALLRSAFALTLGPLPAPLQLT----LGAENFGRVVGMFEQNNVGIRAPSPLPDVLRELSEGGEASVRRDAKQEALKVAAGLVGEIVEAHKGCSDDDEEACGLQISSGHEKSKGSPEDGQGCCGASPPSPVSGFADDKALMEKGRPICPSKEEGGDDALATLRSVLDGYGSGDDGIFAPLDGTALYSLVCCMNHSCRPNCVVRYPGRRRGAGRSDSFGDAAAKAVPLVAEVVLLEDVSAGDELTQSYITREMDLGERKRALEDYGFVCTCSRCSEE 1681
+ G+ +GKG+ L + G I E+P VAMQ + N + C NC G + QL + + K P A +K + +C CG VYCSP CRS+ ER H LLC D P+ F HA TNEIF+L +V+AR+ ++K +VE A P F + WWEV V A + + + + + A DGL + E S F TL T + + F R+VGMFE NN+ + PL L EL E + +V +A L + H A K + + E+ ++++ F +DGTAL+SL+C MNHSC PN V Y +S G +A V L + GDEL +YI E D+ R L +Y F C C RC E
Sbjct: 15 IRYGLVDGKGKALISCKTFGPGEPIFSEKPYVAMQHIANQALIQSCENCHVTVGSIEEQLAHILHVEPAAVPKM-----------PEALQKDVHNEG---KCACACGAVYCSPVCRSDAWERYHCLLCTAH------PDTPMHDFFQHATDTNEIFILAAQVIARVLVQYAK-TSNVELARQ------------------PVDMFCKLPWWEV-VTSTADLEEGQTMEEYCDIFRHLLEQTFAILMDGLQFNIAHLEIHEPHPDEDSDFMTTLSWTNVIADCTRHGIINVDFFARIVGMFEMNNISMEVRHPLSH-LAELHEDTDNAV----------IAKWLSDVQTQVH--------------------------------------------AQVKIYQDDXXXXXVTNEDEDENSIG----------------FPDMDGTALFSLICTMNHSCEPNVAVCY----------ESSG---------LATAVALTPIKVGDELNIAYIETEQDVEARAHDLSEYKFECHCPRCIAE 421 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig140.18.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig140.18.6 >prot_P-littoralis_Contig140.18.6 ID=prot_P-littoralis_Contig140.18.6|Name=mRNA_P-littoralis_Contig140.18.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=557bp MCSLKQHDEDTSGVADAVSVGMTEGKGRGLFASSAMKVGSTILIERPLVAback to top mRNA from alignment at P-littoralis_Contig140:78925..87800- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig140.18.6 ID=mRNA_P-littoralis_Contig140.18.6|Name=mRNA_P-littoralis_Contig140.18.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=8876bp|location=Sequence derived from alignment at P-littoralis_Contig140:78925..87800- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig140:78925..87800- >mRNA_P-littoralis_Contig140.18.6 ID=mRNA_P-littoralis_Contig140.18.6|Name=mRNA_P-littoralis_Contig140.18.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1671bp|location=Sequence derived from alignment at P-littoralis_Contig140:78925..87800- (Pylaiella littoralis U1_48)back to top |