mRNA_P-littoralis_Contig14.73.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig14.73.2
Unique NamemRNA_P-littoralis_Contig14.73.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 7.060e-88
Identity = 192/331 (58.01%), Postives = 217/331 (65.56%), Query Frame = 3 
Query:  135 TRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            T SIKINFQG SRDV V     TLA LQAAIA AF+A+LP R    EA KD+DL FTYKDPDGD IVFDKD EL+LA+RLCP SLEISAAGKE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFL+LNP+RLV QGLAP+VLLA MK +   +     A   + PLGD   NEDLAESVAAG+E M VE+DKKEWNDGFV V+PA +++P                                           A + K+ +   +HKAF+AGGI L PREV PLLVAL V P RL KLG VN K L AM  A KK  +K+
Sbjct:    3 TSSIKINFQGTSRDVNVPVP-VTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKEN-KPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAV--------------------------------APEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDLRAMLQAEKKVAHKR 291
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI)

HSP 1 Score: 300 bits (768), Expect = 6.680e-87
Identity = 192/342 (56.14%), Postives = 220/342 (64.33%), Query Frame = 3 
Query:  102 NNNNMNTSTTATRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            NN + N +T  T SIKINFQGASRDV V A   TLA LQA IA+AF+A+LP R    EA KD+DL FTYKDPDGD IVFDKD EL LA+RLCP SLEISAAGKEK K A   D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+ LL  MK +   +     A   + PLGD   NEDLAESVAAG+E M +E+DKKEWNDGFV V+PA +++P                                           A + K+ +   +HKAF+AGGI L PREV PLLVAL V P RL KLG V+ K L AM  A KK  +K+
Sbjct:    8 NNRDNNDNTMTTSSIKINFQGASRDVNVPAP-VTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEK-KAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSP--------------------------------DNDNEEKNDAVAPEVKKNL---IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLQAEKKTAHKR 307
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE)

HSP 1 Score: 298 bits (763), Expect = 2.960e-85
Identity = 198/351 (56.41%), Postives = 223/351 (63.53%), Query Frame = 3 
Query:   78 MNATNNTINNNNMNTSTTATR-SIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            MNA N+  NNN  N   T T  SIKINFQGASRDV V A   +LA LQAAIA+AF+A+LP R    EA KD+DL FTYKDPDGD IVFDKD EL LA+RLCP SLEISA  KE  +PA K D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNP+RLV QGLAP+VLLA MK +   +     A   + PLGD   NEDLAESVAAG+E M VE+DKKEWNDGFV  +   SAA    TA                                      A + K+ +   +HKAF+ GGI L PREV PLLVAL V P RL KLG V+ K L AM  A KKA +K+
Sbjct:    1 MNAINHNNNNNRYNNDKTMTTPSIKINFQGASRDVNVPAP-VSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKES-EPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDA----------------------APETKKDL---IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDLRAMLRAEKKAAHKR 319
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE)

HSP 1 Score: 292 bits (748), Expect = 4.120e-84
Identity = 191/342 (55.85%), Postives = 217/342 (63.45%), Query Frame = 3 
Query:  102 NNNNMNTSTTATRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            NN   N  T  T SIKINFQGASRDV V A  ATLA LQAAIA+ FE +LP R    EA KD+DL FTYKDPDGD IVFDKD EL+LALRLCP SLEISAAGKE  K     D E  LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP++LLA MK +   +     A   +  LGD   NEDLAE VAAG+E M VE+DKKEWNDGFV V+PA++++                                            A + K+ +   +HKAF+AGGI L PREV PLLVAL V P RL KLG V+ K L AM  A KKA +K+
Sbjct:   19 NNRYNNDKTMTTSSIKINFQGASRDVSVPAP-ATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKEN-KATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANN-----AKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSS--------------------------------SDNGNEEENDDAAPEVKQNL---IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDLRAMLQAEKKAAHKR 318
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE)

HSP 1 Score: 288 bits (737), Expect = 1.380e-82
Identity = 185/334 (55.39%), Postives = 209/334 (62.57%), Query Frame = 3 
Query:  126 TTATRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            T  T SIKI FQGASRDV V      LA LQAAIA+AF+ +LP R    EA  D+DL FTYKDPDGD IVFDK+ EL LALRLCP SLEISAAGKE  K     D E +LYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+VLLA MK +   +     A   + PLGD   NEDLAESVAAG+E M VE+ KKEWNDGFV V+PA+ + PA                                          A + K+ +   +HKAF+AGGI L PREV PLLVAL V P RL KLG V  K L AM  A KK  +K+
Sbjct:   18 TMTTSSIKITFQGASRDVNVRVP-VMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKEN-KATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPA---------------------------------NDNEEKNDAAPEAKKNL---IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDLRAMLRAEKKTAHKR 308
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE)

HSP 1 Score: 285 bits (729), Expect = 2.520e-80
Identity = 189/331 (57.10%), Postives = 213/331 (64.35%), Query Frame = 3 
Query:  135 TRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK 1127
            T SIKINFQG SR+V V A   TLA LQA IA+AF+A+LP R    EA KD+DL FTYKDPDGD IVFDKD EL+LA+RLCP SLEISAAGKE  KP NK D E RLYK+AARNLREYNGVPSMT  KL KTLAFLKLNPRRLV QGLAP+ LLA MK +   +N   +  T    LGD + NEDLAESVAAG+E M VE+DKKE N+GFV   P  SAA    TA                                      A + K+ +   +H AF+AGGI L PREV PLLVAL V P RL KLG VN K+L AM  A  KA +K+
Sbjct:    3 TSSIKINFQGTSRNVNVQAPF-TLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKEN-KPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEA-ANNMKVSKVT----LGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDA----------------------APEVKKNL---IHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYLRAMLQAETKAAHKR 301
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI)

HSP 1 Score: 261 bits (667), Expect = 9.280e-75
Identity = 175/307 (57.00%), Postives = 195/307 (63.52%), Query Frame = 3 
Query:   93 NTINNNNM--NTSTTATRSIKINFQGASRDVEVAADQATLAGLQAAIASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLCPISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDDCNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAAKGKRPVDRPVHKAFVAGGIMLLPRE 1007
            NTI +NN   N     T SIKINFQGASRDV V A   TL  LQAAIA+AF+A+LP R    EA KD+DL FTYKDPDGD IVFDKD EL LA+RLCP SLEISAA KE  KPANK D E RLYK+AARNLREYNGVPSMTP KL KTLAFLKLNP+RLV QGLAP+VLLA MK +   +     A   + PLGD   NEDLA+SVAAG+E M VE DKKEWNDGFV  +    AA A  TA                                      A + K+ +   +HKAF+AGGI L PRE
Sbjct:    2 NTIKHNNCDNNDKMMTTSSIKINFQGASRDVNVPAP-VTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKES-KPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANN-----AKVSKVPLGDGKNNEDLADSVAAGMELMSVE-DKKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDA----------------------APEVKKNL---IHKAFIAGGIQLRPRE 275
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.180e-7
Identity = 35/59 (59.32%), Postives = 41/59 (69.49%), Query Frame = 3 
Query:  453 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSN 629
            LYK AARNLREY+GVPSMT   L KT+  L+L P RLV QGLAP+ +      KN+ SN
Sbjct:   53 LYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXI------KNNNSN 105
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.070e-6
Identity = 31/48 (64.58%), Postives = 36/48 (75.00%), Query Frame = 3 
Query:  453 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLL 596
            LYK AARNLREY+GVPS+T   L KT+  L+L P RLV QGLAP+  L
Sbjct:   57 LYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFL 104
[Close]
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.320e-6
Identity = 30/48 (62.50%), Postives = 38/48 (79.17%), Query Frame = 3 
Query:  453 LYKVAARNLREYNGVPSMTPTKLTKTLAFLKLNPRRLVNQGLAPQVLL 596
            ++K AARNLREY+GVPS+TP  L  T+  L+L P RLV QGLAP++LL
Sbjct:   41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILL 88
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.73.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LN68_ECTSI7.060e-8858.01PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN66_ECTSI6.680e-8756.14PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JQ17_9PHAE2.960e-8556.41PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KAY7_9PHAE4.120e-8455.85PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JPU3_9PHAE1.380e-8255.39PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KB69_9PHAE2.520e-8057.10PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LN82_ECTSI9.280e-7557.00PB1 domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KI70_9PHAE1.180e-759.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBH6_9PHAE1.070e-664.58Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JCG1_9PHAE1.320e-662.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:352169..358785 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Model size4195
Hectar predicted targeting categoryother localisation
Exons4
Cds size1917
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.73.2prot_P-littoralis_Contig14.73.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig14 354416..358708 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789648.428191-UTR-P-littoralis_Contig14:352168..3529041680789648.428191-UTR-P-littoralis_Contig14:352168..352904Pylaiella littoralis U1_48UTRP-littoralis_Contig14 352169..352904 -
1680789648.4370677-UTR-P-littoralis_Contig14:352950..3544151680789648.4370677-UTR-P-littoralis_Contig14:352950..354415Pylaiella littoralis U1_48UTRP-littoralis_Contig14 352951..354415 -
1680789648.486348-UTR-P-littoralis_Contig14:358708..3587851680789648.486348-UTR-P-littoralis_Contig14:358708..358785Pylaiella littoralis U1_48UTRP-littoralis_Contig14 358709..358785 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789648.452079-CDS-P-littoralis_Contig14:354415..3546131680789648.452079-CDS-P-littoralis_Contig14:354415..354613Pylaiella littoralis U1_48CDSP-littoralis_Contig14 354416..354613 -
1680789648.4613156-CDS-P-littoralis_Contig14:355010..3563841680789648.4613156-CDS-P-littoralis_Contig14:355010..356384Pylaiella littoralis U1_48CDSP-littoralis_Contig14 355011..356384 -
1680789648.477575-CDS-P-littoralis_Contig14:358363..3587081680789648.477575-CDS-P-littoralis_Contig14:358363..358708Pylaiella littoralis U1_48CDSP-littoralis_Contig14 358364..358708 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig14.73.2

>prot_P-littoralis_Contig14.73.2 ID=prot_P-littoralis_Contig14.73.2|Name=mRNA_P-littoralis_Contig14.73.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=639bp
MNATNNTINNNNMNTSTTATRSIKINFQGASRDVEVAADQATLAGLQAAI
ASAFEADLPPRPGDNEAPKDSDLRFTYKDPDGDSIVFDKDWELSLALRLC
PISLEISAAGKEKVKPANKHDREHRLYKVAARNLREYNGVPSMTPTKLTK
TLAFLKLNPRRLVNQGLAPQVLLADMKDKNDKSNQNTAAATQQHPLGDDD
CNEDLAESVAAGVEAMRVEEDKKEWNDGFVPVDPAQSAAPAAPTATAVAA
AAPAETSTSDADADHGTAAPTGDDDDTDTDADEAAKGKRPVDRPVHKAFV
AGGIMLLPREVWPLLVALGVGPRRLVKLGHVNVKHLGAMAVAHKKANNKK
LRMTRGSAGAAWRPWGPCGPDGRSMQRGPCGAGGGACRRRGAGASGGKPR
GPGMAMRGHPYSSFTCLPPPPPPHTEEEDGMFFSHAPPAGGGGGGFGGCP
GGRHGGRRGPHAHSHPHGPHYGPHHGAHHGVHHGVHRGPHPPHPHPHPHP
HGFEGGEGGSGFHQPISPRAAREDEDASGSSWRVTAPARPRAARDDEDVS
ASSRRAPAPSWRAPAPARLLLLGGVTGAAPTTGARKPTNKRIAGMHVHQR
CEGGGGSNVFGRVEEGRAARLPGLRAYLAGLDQHVTHE*
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mRNA from alignment at P-littoralis_Contig14:352169..358785-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig14.73.2 ID=mRNA_P-littoralis_Contig14.73.2|Name=mRNA_P-littoralis_Contig14.73.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=6617bp|location=Sequence derived from alignment at P-littoralis_Contig14:352169..358785- (Pylaiella littoralis U1_48)
TGGGGATCTTCAGGAACTTCTCTTGCTTGTCCGCCCTCTGTCTCGTTCGC
ACCCCCTGCCATCTCACTCACTAAACAATGAACGCCACCAACAACACCAT
CAACAACAACAACATGAATACCTCCACTACTGCCACCCGCTCGATCAAGA
TCAACTTCCAGGGTGCCTCTCGCGATGTCGAAGTTGCAGCTGACCAGGCC
ACGCTCGCCGGCCTTCAGGCGGCCATCGCTTCGGCCTTCGAGGCAGACCT
GCCTCCCCGTCCCGGGGATAATGAGGCACCTAAGGACAGCGACCTGCGGT
TCACCTACAAGGACCCCGATGGAGACAGCATCGTGTTCGACAAGGACTGG
GAGCTGAGCCTGGCCCTGCGCCTGTGCCCCATCTCACTTGAGATCTCGGC
CGCTGGCAAAGAGAAGGTGAAGGTAAGAAGAGACAGAGCAGAGATTGATT
TCACCAGTATTCCAGGATATCACACTGCTGTGCAAGTAGGGCCTCCTCTC
TTGCCCCTGGCCTTGTCTGACGGCGAGACCGCCGTACCAGGACGCGGGGT
CGACAAGTGTGGACGCCCCTCTCGATCCGTACCCTCTAACGGCAGTAGTT
GCACCCGTCCGGTACAGTAGTCATTGGTTTAATTTTGCACGCCCTGTACA
ACTAAATAGTTGCCTAAATTGGCACCAAAGAGAAGTTCCTCTACAAGCGG
GAGTGAACATTATCACAAGCAAAAAATAAATAAAACCCACGAAAAGCTGC
CAAAAAAAAAGCAAAAAAAGCAAAAAAAAGTGGTCTTGGAGGGACTCGCA
ACAATTTGTAACTATCGGTCTATTGGGGAGCACTTGCGTGTGTGTGTGTG
CGTGTGGGATTTTTTTAATCGCCTTTTCCGAAATTACAGAGAACCCAAAA
AGTCGAACATCGAACTATCCGCTTGTTGGATGTTCGATGTTCGACTTTTC
CAAAAAATATGTAGGACCCACCCTGTGTGTGTTGTCATCCCTCTAATTGG
ACGCCATTCTGCACCTTTCGGGTAGGTCGACGCTCCAACTGGGGTCACAC
AGGGGGAAGTAAACACAGGAGTTTTTTTTTTTCTCCACTTCCCTCTGCGG
TACTTGCCTTGTTTTTGGTTGAGCTTTTATCGCGAGAAAGGGGACAGGGA
TCCCTTTCCCTCGTCAATGGTACGATTGAATTTTTGTTTACTCACGAATT
AATCGCTTTCCACTTTCACGCGCATTGTGAGAAAAGAACTCAGATCATCG
TGTTACTGCACTGGGATTCGAACTCACGCGTGTACCTCAAATATATCAGC
ACGCAAGTCAGCAGTGTACAGCAAGACAGCAGCACACAGGTAGCAGTACA
CAGATTCTTTTGGAAAACCTTCCTGTCGCACGAGTATACTTCGTAGTTGT
CTGAGCCAACACGTTGGGTTCTCACCCTCGTGCTCGTGTACCGGTCGCCC
CGGTGGTTCAGTTGGTAATCCACGTAACCTTCTGACATGCACGCGTGAGT
TCGAATCCCAGTGCAGTAACACAGTCTGGGTTTCCTTCTCACAATGCGCG
TGAAAGTGGAAAGCGATTAATTCGTGAGTCAACAAAATTCGATCGTACCA
TCGACAAGGGAAAGGGATTGCCGTCCCCTTTCTCGCGATAAAAGCTCAAC
CAAAACAAGGCAAGCACCCTGCACCGCAGAGTGAAGTGGAGAAAAAAAAA
AAACTCCTGCGTTGACTTCCCCCTGTGCGACCCCAGTAGGAGCGTCGACC
TACCCGAAAGGTGCAGAGTGGCGTCCAATTAAAGGGATGACAACACACAC
ATACACACACTCGTAGTTTTGCTGGTTCGACCGATGTTAGCTGGGTGTCA
TGATTGTTTTTTATTTTGACCTAGCGGGCGCTGTCGTTGCACGCTGCCAT
ACCTAGCATCATACGTGCATTTTGCATCGAAAGTACGAAAATACGAAACA
CTTGATCCGCAGCTAATTAGTCTTGGGTGGCGTCTGCATGTAAGCTCATT
AGACTCGGCCAACCGCCTTTGTGCCTTATCTATCTGCAGCCGTTTGTGTC
CCATCTACCGTTTGTGTCCCATCTACCGTATTCCTGCACGTTTGAAATTT
GCATGATGCGTACATTTTCCCTCTCTGGCTCGTTATTTGTGTCGACCTGA
TTGACTGCTGTACAACAACGCGATACAGCAGCTGTATCGTATACTTCGTA
CATGATATGGAAGCAGTCTAGTTGTGTTCACGAGCTCGATTCTGTATGTG
GTATCCCGTGTATTTACCGCAGCAGTTGACTGTTGTTTTGTCTGGTTCAC
CATTCAGGGTATCTCAACCTCCCCTCCCCTCCCCTCTCCCCTCCCCTCTC
CCCCCCCGCCTCTGCGCCTCCTCTGTCCATTCCACCTCTCTTTACTTCCA
GCCCGCCAACAAGCACGACCGTGAACACAGGCTGTACAAGGTGGCCGCCC
GTAACCTCCGCGAGTACAACGGCGTGCCCTCGATGACCCCGACGAAGCTC
ACCAAGACCCTGGCATTCCTCAAGCTGAACCCGCGCCGCCTCGTGAACCA
GGGCCTGGCCCCCCAAGTGCTGCTGGCTGACATGAAGGACAAAAACGACA
AGAGCAACCAGAACACGGCGGCGGCAACACAGCAGCATCCTCTAGGCGAC
GACGACTGCAACGAGGACCTCGCCGAATCGGTCGCCGCCGGCGTAGAGGC
GATGAGGGTGGAGGAGGACAAGAAGGAGTGGAACGACGGTTTCGTTCCTG
TTGACCCCGCCCAGTCAGCCGCTCCTGCTGCTCCTACGGCAACCGCCGTC
GCGGCGGCTGCACCCGCTGAAACGAGCACCTCCGATGCTGACGCCGACCA
CGGCACCGCCGCCCCCACCGGGGACGATGACGACACCGACACCGACGCTG
ATGAGGCTGCCAAGGGAAAGCGCCCTGTGGATCGCCCCGTGCACAAGGCC
TTCGTCGCGGGCGGCATCATGCTCCTGCCCCGCGAGGTCTGGCCCCTGCT
CGTCGCCCTGGGCGTCGGACCCCGTCGTCTGGTCAAGCTCGGTCACGTCA
ACGTCAAGCATCTCGGCGCCATGGCGGTCGCGCACAAGAAGGCGAACAAC
AAGAAGCTGCGCATGACCCGCGGCAGTGCTGGAGCTGCGTGGCGGCCGTG
GGGGCCTTGCGGCCCCGATGGCCGCTCGATGCAGAGGGGTCCCTGCGGCG
CCGGTGGTGGTGCTTGCCGCCGCCGCGGTGCCGGTGCTTCCGGGGGAAAG
CCCCGCGGACCGGGAATGGCGATGCGCGGGCACCCCTACTCCTCCTTCAC
CTGCCTTCCCCCCCCTCCCCCGCCTCACACGGAGGAGGAGGACGGCATGT
TCTTCTCTCACGCTCCCCCTGCCGGTGGTGGTGGTGGTGGCTTTGGCGGT
TGCCCCGGCGGTCGCCATGGTGGTCGCCGCGGTCCTCATGCCCACTCCCA
CCCCCACGGCCCTCACTACGGTCCTCACCATGGCGCTCACCACGGCGTCC
ACCACGGCGTCCACCGCGGCCCTCACCCCCCGCACCCCCACCCCCACCCC
CACCCCCACGGGTTCGAGGGTGGTGAGGGAGGTTCCGGATTTCACCAACC
GATTTCACCACGGGCCGCCCGGGAAGATGAGGATGCTTCGGGCTCTTCAT
GGCGAGTAACAGCGCCAGCACGACCACGGGCCGCCCGGGATGATGAGGAT
GTTTCGGCCTCTTCACGTCGAGCACCAGCGCCTTCATGGCGAGCACCAGC
GCCAGCACGGCTACTACTACTGGGGGTGAGACCACCACCGTCTTAACATC
GAAGGAGGAGCCTGGCTCCATTTCTGTAGCTTGTACTTAAGATGCCATTA
CTGTGCGTAGGTTGGTTGCTCTCCTTCTTTCAGGTATTATCTGCAATTGA
GCAAAAGTCTCCCCTCGGAAGAATCGATACGAGGGGCGTAGAACGGAAGG
TCTTGACGATACGTGAACCGTTCTACCCGTCAGGCTTTTGCGCTCATGCA
GCACGACGAAGGACCAGCGACAAAATATTGCGTGGAAAGTTTTTTTGCGT
TGTTTACAAGGAACCGATCCCCGCGTCGAGGGATGGAATAGACTTTTTGA
CAATCAGCAGACTTTTTGACAAACAGCATTGCTCTCGTTTCTTTTTTTTT
CGCATACGTCTCTCGACAGCAGGGTGTCACGGGGGCTGCCCCTACTACAG
GGGCACGAAAACCTACGAATAAGCGTATCGCAGGGATGCATGTGCATCAA
CGTTGCGAGGGGGGCGGGGGTAGTAACGTTTTTGGAAGAGTCGAGGAAGG
GCGTGCAGCGAGATTGCCCGGGCTGAGGGCGTACTTGGCAGGTCTAGACC
AGCACGTGACCCATGAATAGGCGCATCGACGCTCGCAGATTTTTCGCGTA
TAATCTCATGCGAAGTTTGTTTTTTGGTGTACAACAACGAGCACACCAAA
TTGGGCGTACAAATAGGTGGCGGTGTCGTGGAACTACATCTGTGTCGGGG
TGAACTAACTCCTGCGGAAGCATGCATTTTAAGGACGGGAGTAAGGTGGT
CGGCGCCACAAAAAAGGGAAGTTTTTCCGAGTTTGTAGTGGGGCTGATTT
GCTCATATCGGGGACATCCAATGACGGCTGCGGTTTACGCAAAATTAATG
TTGACCCATCGTCAGCATCACTATCTTCGCAGAGTCGGTCAGTAGTGTAC
CCATACGTATGCCACGTGTGGCTCCTGCAGTGGTTGAACAGAGCGAAAAG
AGAAGCGTACTCGTCGATAGTTGTTGATGTAACAGTACGTAAAGTGATTT
CGTAAAAGAGGGTTTGTATTGGTGTGTTCGTCCCATTTCTTCTGGCGCCT
GTCTATGCACCGTTCGGCAGATATCGTTGCGTACGCTCAGCTGGGGTCAC
ACATAACGAGTACATATTATTTTCTGTTTTGTGGGAGGCGTACGTCGCGC
AGCGGTATGTCTCGGGGTTAGGTTTGAGTAGCGGGGGGTTCGCGTCGAGT
CAAATATCTAGAGAAAAAGAGGGAAAGGGAAATAAATGTTTGGAGAAAGA
CTCACGTGACGTTTTTTCTTTTTTCGTGATACATATAGGAATATTGGTAC
ATGCTACTTCGACGTATCGTATCATATGGTATGATATCGTACAACACGTG
GCCTCCCTGTTCGTTTACGTTATATCGAGAGGGAGAATTTTCGTGCTGCT
GCACGCTCTGCACTGCTGAATAATCAAAGAAGATCCCCATATACTCGAAG
TATATGATATCATCGGAATACTCACCTGAGGAGTTGTTGATTTTCACATC
ACCTGGGCGTGTACGTCCCATATATTTTGGCGCCAGTCTTTCCACCTTTC
GGTGAAATCCTTGTCGTTCAGCCGTGGTCACACAGGCGGAAGGTCACACG
CGAGTTTTTTTTTTATTGCCCACACACCTTTCCTTCGGCGGTGCTTGCCT
TTGATTTTGAGTTCGAGAAGAGTTCAGCGATCCCTTCCCTCTGTTTACTC
ACGAATAAATCGCTTCTCACTAATGTAAACTTCGGCAAAACGCTGTCAGA
GAGAATCGAAGTTGCGACCATTGCCAGCAGGTAGTACAGCACATAAATAG
GAAAACTTACCCCCACCGCGGCTTCGCGTTTGTACGAAAGTGCACATTTT
CTTACGCAGTTTGGCAAAGTCACAGAAAATTCGATTATAACAGCCAACAG
CAGGAGTGTATTTCGTGGACCCACACGACCTCGCCCCGCCCTCCACCCCT
CGTTGCCCGTGCCACAGGATGTCATGGGTGGGTAGAAAGCAGGGAACATT
AGTGTGGCGATAACGTAACTATGTTGCGCGGACGTGCGGAGCAATCTTCA
GTAAAACGCGGCCCTTGAGATCGGGGCAAAGGGGGGGGGGGAATCAGTGC
CAATGCGGGAGTTGATTCAAAACAGGCCATTGATCTGTTCTCTGGTGCTA
AAATGGATGGTGTCCCCCGAGAGGTTATGCTTGCGTTGCTGAGACACCAG
GCTTGCTATATGGCTATCCTTGCTGTCTAGAATATTGAGTCAGTTGCGGG
CTATGATTTAGACAGAGTTTTGTCACGCTTCGCGTGCTCATTTTGAGTGC
AAAGCTTGAAGGCACTCGTAAAAACAGTACTAGGATCACAAGGGGGGGCT
GATGAGAGGATGGAAAACTACAGCAGTACAAGTACGGTGCTTGCGATGGG
GAGGAAACTGAAGTAAAACGTGCGCATGTTGATAGTGATGGAGGGCTTCG
AGGGCGTGGTTCAGAAGCAAGTGTGGTCAGCATCTAAGGTGTGACTTGGC
TTGCATCCGTGGGCATCACCGAAAACACCAATTTTCTATGTTTGTCGCCC
CCAAGAACACATGCATGTTGGTTCAGCGGAAAAACAAAACACTTCCACAG
TGGAGGTGGCTGCACCTTTTTGCCCGCATTCAGCGATATGTTGATTATCA
TATGTCCCGTTGTGTTGAACGCCCCGCCCCGTTTCGTAGTTATTTTTCCC
CGATATTATATTGCGTCATGTTGGGCATACTTTTGACCAACGGTCATATA
GCTTGCGAATCGGAGAAACGTCACCAAGGCGCCAGCCACCAGGGTTGCCG
TTCGCTCTTTCTTCGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig14:352169..358785-

>mRNA_P-littoralis_Contig14.73.2 ID=mRNA_P-littoralis_Contig14.73.2|Name=mRNA_P-littoralis_Contig14.73.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1917bp|location=Sequence derived from alignment at P-littoralis_Contig14:352169..358785- (Pylaiella littoralis U1_48)
ATGAACGCCACCAACAACACCATCAACAACAACAACATGAATACCTCCAC
TACTGCCACCCGCTCGATCAAGATCAACTTCCAGGGTGCCTCTCGCGATG
TCGAAGTTGCAGCTGACCAGGCCACGCTCGCCGGCCTTCAGGCGGCCATC
GCTTCGGCCTTCGAGGCAGACCTGCCTCCCCGTCCCGGGGATAATGAGGC
ACCTAAGGACAGCGACCTGCGGTTCACCTACAAGGACCCCGATGGAGACA
GCATCGTGTTCGACAAGGACTGGGAGCTGAGCCTGGCCCTGCGCCTGTGC
CCCATCTCACTTGAGATCTCGGCCGCTGGCAAAGAGAAGGTGAAGCCCGC
CAACAAGCACGACCGTGAACACAGGCTGTACAAGGTGGCCGCCCGTAACC
TCCGCGAGTACAACGGCGTGCCCTCGATGACCCCGACGAAGCTCACCAAG
ACCCTGGCATTCCTCAAGCTGAACCCGCGCCGCCTCGTGAACCAGGGCCT
GGCCCCCCAAGTGCTGCTGGCTGACATGAAGGACAAAAACGACAAGAGCA
ACCAGAACACGGCGGCGGCAACACAGCAGCATCCTCTAGGCGACGACGAC
TGCAACGAGGACCTCGCCGAATCGGTCGCCGCCGGCGTAGAGGCGATGAG
GGTGGAGGAGGACAAGAAGGAGTGGAACGACGGTTTCGTTCCTGTTGACC
CCGCCCAGTCAGCCGCTCCTGCTGCTCCTACGGCAACCGCCGTCGCGGCG
GCTGCACCCGCTGAAACGAGCACCTCCGATGCTGACGCCGACCACGGCAC
CGCCGCCCCCACCGGGGACGATGACGACACCGACACCGACGCTGATGAGG
CTGCCAAGGGAAAGCGCCCTGTGGATCGCCCCGTGCACAAGGCCTTCGTC
GCGGGCGGCATCATGCTCCTGCCCCGCGAGGTCTGGCCCCTGCTCGTCGC
CCTGGGCGTCGGACCCCGTCGTCTGGTCAAGCTCGGTCACGTCAACGTCA
AGCATCTCGGCGCCATGGCGGTCGCGCACAAGAAGGCGAACAACAAGAAG
CTGCGCATGACCCGCGGCAGTGCTGGAGCTGCGTGGCGGCCGTGGGGGCC
TTGCGGCCCCGATGGCCGCTCGATGCAGAGGGGTCCCTGCGGCGCCGGTG
GTGGTGCTTGCCGCCGCCGCGGTGCCGGTGCTTCCGGGGGAAAGCCCCGC
GGACCGGGAATGGCGATGCGCGGGCACCCCTACTCCTCCTTCACCTGCCT
TCCCCCCCCTCCCCCGCCTCACACGGAGGAGGAGGACGGCATGTTCTTCT
CTCACGCTCCCCCTGCCGGTGGTGGTGGTGGTGGCTTTGGCGGTTGCCCC
GGCGGTCGCCATGGTGGTCGCCGCGGTCCTCATGCCCACTCCCACCCCCA
CGGCCCTCACTACGGTCCTCACCATGGCGCTCACCACGGCGTCCACCACG
GCGTCCACCGCGGCCCTCACCCCCCGCACCCCCACCCCCACCCCCACCCC
CACGGGTTCGAGGGTGGTGAGGGAGGTTCCGGATTTCACCAACCGATTTC
ACCACGGGCCGCCCGGGAAGATGAGGATGCTTCGGGCTCTTCATGGCGAG
TAACAGCGCCAGCACGACCACGGGCCGCCCGGGATGATGAGGATGTTTCG
GCCTCTTCACGTCGAGCACCAGCGCCTTCATGGCGAGCACCAGCGCCAGC
ACGGCTACTACTACTGGGGGGTGTCACGGGGGCTGCCCCTACTACAGGGG
CACGAAAACCTACGAATAAGCGTATCGCAGGGATGCATGTGCATCAACGT
TGCGAGGGGGGCGGGGGTAGTAACGTTTTTGGAAGAGTCGAGGAAGGGCG
TGCAGCGAGATTGCCCGGGCTGAGGGCGTACTTGGCAGGTCTAGACCAGC
ACGTGACCCATGAATAG
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