mRNA_P-littoralis_Contig14.34.11 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig14.34.11
Unique NamemRNA_P-littoralis_Contig14.34.11
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: A0A6H5JK02_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE)

HSP 1 Score: 590 bits (1521), Expect = 6.890e-193
Identity = 310/414 (74.88%), Postives = 341/414 (82.37%), Query Frame = 2 
Query: 1043 HAPSSTTPTEGGHGHE----------------------QNSEQAKIEAQRKKDEAERLRLQEIAENQPQQPHXXXXXXXXXXXXXXXKSGGGAGGDMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKF-GGDQGKKNGEGIYIGTSSTQWDKNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPHEICQNTISG 2215
            HAPS TTP E  H  E                      QNSEQAKIE QR+KDEAER+RLQ+IA+NQPQ   XXXXXXXXXXXXX      G+GG +TVKEGESIQ ALD A+PGTTI IEAGTY+E+LKSRVDGTKEQPIT++GPSSGPTAIIKGSDKSGTCVEINHDYY+L+DFTIDG I E C+KDNVRE FR KCLA+RG R  R  T + G  Y S+VDGV++KNMKIYNCGGEGIR+RYFVTNC LFHNRITSTGC+DFKF GG+ G KNGEGIY+GTSS QW+KN T E D+CRW R+YENYIDTHGNECVDVKEGA+DTVIETNYCTGQLD DS GIDSRAS TTIRYNKVVGCKGAGVRLGGHKVG +QYGI CKVYCNILENNE  G+K+MTEP+EICQNTISG
Sbjct:  267 HAPSHTTPMEVDHNSENAHAAGGXXXXXXXXXXXPQVDQNSEQAKIEEQRRKDEAERIRLQKIADNQPQXXXXXXXXXXXXXXXXSSGHSSGSGGTVTVKEGESIQAALDAASPGTTILIEAGTYHEALKSRVDGTKEQPITLQGPSSGPTAIIKGSDKSGTCVEINHDYYVLNDFTIDGLIKEDCNKDNVRECFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDGGEHGVKNGEGIYVGTSSKQWNKNVTDEPDVCRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEDSAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGINCKVYCNILENNEYAGVKVMTEPNEICQNTISG 680
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: D7G073_ECTSI (Putative nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G073_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 9.370e-171
Identity = 288/426 (67.61%), Postives = 321/426 (75.35%), Query Frame = 2 
Query: 1088 EQNSEQAKIEAQRKKDEAERLRLQEIAENQPQQPHXXXXXXXXXXXXXXXKSGG---GAGGDMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFG-GDQGKKNGEGIYIGTSSTQWDKNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPHEICQNTISGKGDDVLQGVPRKCLQGLQRQRRMPLRRRPAQAGHRDHQVVPKLQAL 2353
            +QNSEQAKIE QR+KDEAER+RLQ+IA+NQPQ   XXXXXXXXXXXXXX  S G   G+GG +TVKEGESIQ ALD A+PGTTI IEAGTY+E+ KSR                                          DFTIDG I E C+KDNVRE FR KCLA+RG R  R  T + G  Y S+VDGV+VKNMKIYNCGGEGIR+RYFVTNC LFHNRITSTGC+DFKF  GD G KNGEGIY+GTSS QW KN T E DICRW R+YENYIDTHGNECVDVKEGA+DTVIETNYCTGQLD +S GIDSRAS TTIRYNKVVGCKGAGVRLGGHKVG +QYG+ CKVYCNILENNE  G+K+MTEP+EICQNTIS       QG+PR+C Q L+  +R+PLRR  + AGHRDH VVP+LQAL
Sbjct:   30 DQNSEQAKIEEQRRKDEAERIRLQKIADNQPQXXXXXXXXXXXXXXXXXHHSSGHNAGSGGTVTVKEGESIQAALDAASPGTTILIEAGTYHEAFKSR------------------------------------------DFTIDGLIKEDCNKDNVRECFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVVKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFDEGDHGVKNGEGIYVGTSSKQWSKNVTDEPDICRWTRIYENYIDTHGNECVDVKEGAVDTVIETNYCTGQLDEESAGIDSRASSTTIRYNKVVGCKGAGVRLGGHKVGREQYGVNCKVYCNILENNEYAGVKVMTEPNEICQNTISEHHQRQRQGLPRRCRQELRGGQRVPLRREASPAGHRDHPVVPELQAL 413
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: D7G3L7_ECTSI (FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3L7_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 2.350e-72
Identity = 142/335 (42.39%), Postives = 201/335 (60.00%), Query Frame = 2 
Query: 1250 GAGGDMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGS---DKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKD---NGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPH-EICQNTISGKGDD 2227
            G    ++VK G  +Q ALD+A PG T+ +  G Y E+  ++  G ++  ITI G + G  AI+KG    D  G  ++I H YY LD FTIDG+        + + ++ +KCL ++  R++    K    NG  + SS++G+++ NM I NCGGE +R+RYFVT   +++NRIT+ G  DF    D G KNGEGIY+GTSS QWD  KNP+ E D   +N  ++N+ DT GNE +D+KEG+   ++E NYCTGQ D +S  +D+R      R+N      GAG+R+GGHK+   QYG   +VY N+LENN+  GIKI   P   +C N I G   D
Sbjct:   27 GLAATISVKPG-GLQSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYG--AIVKGDQDIDNDGYALKIEHSYYRLDRFTIDGK--------HSKNNYIDKCLYVQQNRDNDDKAKKIKFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDFVM--DGGSKNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGSRYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNDYAGIKITMSPQGAVCSNDILGSKYD 348
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: K2EPK7_9BACT (Beta_helix domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=K2EPK7_9BACT)

HSP 1 Score: 246 bits (627), Expect = 2.720e-68
Identity = 144/331 (43.50%), Postives = 193/331 (58.31%), Query Frame = 2 
Query: 1253 AGGDMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPHEICQNTISGKGDDVLQG 2239
            A G   VK  +SIQKA+D A  G TI++  GTY +   S+ +G  + PI I+G +    +I+KG  K G  +EINHDY ILD FT+DG  +         ES+R+K +   G  N             + V G+ +KNM I N GGE IRLRYF T   + +N IT+ G  DFKF  D G KNGEG+YIGT+  Q    KNPT + D    N +++N IDT GNECVD+KE +   ++E N CTGQ D +S G+D+R SG   R N++ GC GAGVRLGG +  +   GI   V  N + +N+NGG+K+M  P  IC NT++  G  +  G
Sbjct:   89 ADGLSEVKAFKSIQKAIDLAQSGETINLTKGTYLQDFVSKRNGNIDAPIIIKGTAE---SIVKGGGK-GRVIEINHDYIILDGFTVDGFFDSA----KKAESYRDKLIYALGKENK------------NGVSGLKIKNMSIKNAGGECIRLRYFATKNEIVNNVITNCGVVDFKF--DGGGKNGEGVYIGTAPEQRKDGKNPTADPDQSNENWIHDNVIDTQGNECVDIKESSSGNIVERNKCTGQKDTESAGLDARGSGNIFRNNQIFGCLGAGVRLGGDEKSD---GINNIVSANNIYDNKNGGVKVMRSPQTICGNTVTNCGKGICVG 394
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: B5LWC7_9PHYC (Putative nosD copper-binding protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWC7_9PHYC)

HSP 1 Score: 249 bits (635), Expect = 4.860e-67
Identity = 141/329 (42.86%), Postives = 197/329 (59.88%), Query Frame = 2 
Query: 1262 DMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMT-EPHEICQNTISGKGDDVLQG 2239
            D++ K+  SIQ  LD+A PG TI +  G Y + LKS   GT +Q IT++G      A+++G+D S   VEINH Y  L+ FT+ G+           E + +KC+ I GT   R + ++NG  Y SS+DGV+VK M+I +CGGE +R+R F TN  ++ NRI   G  DF  GG    KNGE IYIGTSS QW   KN     D  ++  V++N ID+ GNECV+VKEGA D ++E N CT Q D++S G+ SR    T RYN +  C GAG+R+GGH +G+  YG   +VY N+  + E   +K+ T + H  C+N+  G G   ++G
Sbjct:   20 DLSPKD--SIQAHLDKARPGDTIVLGDGEYEQDLKSVTHGTPDQRITVKG---SRRAVVRGADSSRV-VEINHSYITLEGFTVSGK--------RGGEEYADKCVFILGTAKPR-IIRENGGEYQSSLDGVVVKGMQIQDCGGECLRVRSFATNVEIYGNRIEGCGRDDFHLGGSS--KNGEAIYIGTSSNQWHDGKNSRDGPDYTKYVWVHDNTIDSQGNECVEVKEGASDVLVEYNVCTDQQDSNSAGMGSRTDDVTFRYNDISDCLGAGIRIGGHTIGDKTYGENNEVYGNVFHDTEYSSVKVETGKNHVFCENSC-GDGSCTVRG 330
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: A0A6H5JFC7_9PHAE (PPIase cyclophilin-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFC7_9PHAE)

HSP 1 Score: 253 bits (645), Expect = 5.880e-67
Identity = 141/335 (42.09%), Postives = 199/335 (59.40%), Query Frame = 2 
Query: 1250 GAGGDMTVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGS---DKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKD---NGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPH-EICQNTISGKGDD 2227
            G    ++VK G  +Q ALD+A PG T+ +  G Y E+  ++  G ++  ITI G + G  AI+KG    D  G  ++I H YY LD FTIDG+        + + ++ +KCL ++  R++    K    NG  + SS++G+++ NM I NCGGE +R+RYFVT   +++NRIT+ G  D+   G    KNGEGIY+GTSS QWD  KNP+ E D   +N  ++N+ DT GNE +D+KEGA   ++E NYCTGQ D +S  +D+R      R+N      GAG+R+GGHK+   QYG   +VY N+LENN   GIKI   P   +C N I G   D
Sbjct:  331 GLAATISVKPG-GLQSALDKAKPGDTLRLAPGEYWETAVTKTAGREDAYITIEGETYG--AIVKGDQGIDNDGYALKIEHSYYRLDRFTIDGK--------HSKNNYIDKCLYVQQNRDNDDKAKKINFNGHKFRSSINGLVLSNMDINNCGGECVRMRYFVTYSQVYNNRITNCGTHDYVMNGSS--KNGEGIYLGTSSNQWDDGKNPSDEPDESSYNHFFKNHFDTQGNEGIDIKEGARYNIVEDNYCTGQKDPNSACLDARGDSNIFRFNTCEDNLGAGIRIGGHKIDGHQYGQNNEVYENLLENNGYAGIKITMSPQGAVCSNDILGSKYD 652
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: UPI0019FF4931 (DUF1565 domain-containing protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019FF4931)

HSP 1 Score: 243 bits (620), Expect = 2.660e-66
Identity = 144/314 (45.86%), Postives = 186/314 (59.24%), Query Frame = 2 
Query: 1283 ESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQ--GKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPH-EICQNTI 2209
            ++IQKA+D A PG TI++ +GTYN+ ++SR +GT   PIT+ GPS+   AIIKG   S    EINHDY  LD FTIDGQ++           +R+K L + GT                 V G+ V NM   N GGE +RLRYF  N  + ++   + G  D+  GG+   G KNGE IYIGTS+ QW   KNPT E D    N V+ N+++T GNECVD+KEGA   ++E N CTGQ D +S G+DSR  G T RYN+  G  G GVRLGG  V  +QYG    VY NI+ +N  GG+K M  P  +IC NT+
Sbjct:   55 QTIQKAVDLAQPGDTINLASGTYNQDIRSRRNGTASAPITLIGPSN---AIIKGGGNS-RIFEINHDYLTLDGFTIDGQVSSSL--------YRDKLLFVIGTE------------VRDGVSGLRVLNMTFKNAGGECLRLRYFAQNNEIAYSTFLNCGQDDYP-GGEWAGGGKNGEAIYIGTSNNQWGDGKNPTNEPDQSNNNWVHNNFMNTQGNECVDIKEGATGNIVEYNECTGQKDENSAGLDSRGDGNTFRYNETYGNVGGGVRLGGALVDGEQYGKNNNVYDNIIYDNIAGGVKFMVTPQGKICGNTM 343
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: A0A0G0APH1_9BACT (Beta_helix domain-containing protein n=2 Tax=Candidatus Moranbacteria TaxID=1752737 RepID=A0A0G0APH1_9BACT)

HSP 1 Score: 238 bits (607), Expect = 1.370e-65
Identity = 141/312 (45.19%), Postives = 187/312 (59.94%), Query Frame = 2 
Query: 1283 ESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPHEICQNTIS 2212
            ++IQKA+D A  G TI++  G Y +   S+ +G  + PI I+G      +IIKG   +G  +EINHDY ILD FT+DG      S D   ES+R+K + + G        K NG      V G+ +KNM I N GGE IRLRYF T   + +N I + G  DFKF GD   KNGEGIY+GT+  Q    KNPT + D    N +++N IDT GNECVD+KE +   ++E N CTGQ D +S G+D+R SG T R N++ GC GAGVRLGG +  +   G+   V  N + NN+NGG+K+M  P  IC NTI+
Sbjct:   99 QTIQKAIDLAQAGETINLSEGIYLQDFVSKRNGKSDAPIVIKGTKD---SIIKGGG-NGRVIEINHDYIILDGFTVDGFYG---SSDKA-ESYRDKLIYVLGKE------KKNG------VTGLRIKNMNIKNAGGECIRLRYFATKNEIVNNLIENCGVEDFKFDGDG--KNGEGIYVGTAPEQLKDGKNPTQDPDQSNENWIHDNVIDTQGNECVDIKEASSGNIVEKNKCTGQKDPESAGLDARGSGNTFRNNQIFGCLGAGVRLGGDEKTD---GVNNVVSDNNIYNNKNGGVKVMRSPQVICGNTIT 385
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: A0A6H5L3G3_9PHAE (Beta_helix domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 239 bits (609), Expect = 1.460e-65
Identity = 137/323 (42.41%), Postives = 190/323 (58.82%), Query Frame = 2 
Query: 1280 GESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTA-----IIKGSDKSGTCVEINHDYYILDDFTIDGQI----NEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPH-EICQNTIS 2212
            G + Q ALD   PG  I +  G Y E LK+R DGT + PITIRG  +G T      +++G+  S   +EI HDYYI++DFT++G      +     D+ ++ +R+  + I    N     +  G  Y S++DG++++NM + N GGE IRLR  VTN  ++ N IT  G +DF+  GD   KNGEG+Y+GTSS QWD  KN     D+C  N +  NYI T GNE +DVKEG +DT+IE N    Q D DSGGI SR   + IRYN +    GAGVRLGGH V   +YG   +VY N + +  +  +K+M +P  +IC N ++
Sbjct:   30 GTAFQDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRG--AGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRD--VLIYAVANREPTERAGG--YISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFREDGDG--KNGEGVYVGTSSKQWDSDKNWDDVPDVCMGNIIRGNYIRTRGNEGIDVKEGTVDTLIEYNEVYMQYDDDSGGIGSRGDRSIIRYNHIEDTDGAGVRLGGHTVDGIEYGKNNQVYGNTMVDCRHSAVKVMVDPQGQICNNDVT 344
[Close]
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Match: A0A261GHV7_9GAMM (DUF1565 domain-containing protein n=1 Tax=Hahella sp. CCB-MM4 TaxID=1926491 RepID=A0A261GHV7_9GAMM)

HSP 1 Score: 230 bits (586), Expect = 3.850e-63
Identity = 129/313 (41.21%), Postives = 184/313 (58.79%), Query Frame = 2 
Query: 1283 ESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPSSGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFREKCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFVTNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWD--KNPTGEQDICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSRASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGIKIMTEPHE-ICQNTIS 2212
            ++I  AL+ A PG  + +  G Y + +K+   G + +PI I+G  S   A++KG +  G  ++INHDY  L +FTIDG +     K N  E +R+  + ++GT             +    +G ++++M+I N GGE +RLRY VT   +F N   + G +DF+F G    KNGE IYIGTSS QWD  KNP+ + D   +N V+ NY  T GNECVD+KEGA   ++E N C GQ D  SGG D+R     IRYN     KGAG+R+GG+ V   QYG+  +VY N + +N+N GIKIMT P   +C N+++
Sbjct:   62 KTINAALEYAQPGDRVYLLEGKYYQDVKTVRSGLRSKPILIQGTKS---AVLKG-ENGGRVLQINHDYIHLRNFTIDGLVG----KGNGPEDYRKSLIFVQGTE------------HKQGPEGFVMRSMRIRNAGGECVRLRYHVTRAEIFGNTFYNCGAYDFQFDGRG--KNGEAIYIGTSSEQWDDGKNPSADPDHSNYNWVHHNYFLTRGNECVDIKEGAAHNLVENNICAGQQDPASGGFDARGDYNIIRYNVSYSNKGAGIRVGGNMVNGRQYGVFNEVYGNKIFDNDNSGIKIMTYPQRYVCGNSMT 352
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.34.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JK02_9PHAE6.890e-19374.88Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
D7G073_ECTSI9.370e-17167.61Putative nosD copper-binding protein n=1 Tax=Ectoc... [more]
D7G3L7_ECTSI2.350e-7242.39FirrV-1-B30 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
K2EPK7_9BACT2.720e-6843.50Beta_helix domain-containing protein n=3 Tax=Bacte... [more]
B5LWC7_9PHYC4.860e-6742.86Putative nosD copper-binding protein n=1 Tax=Feldm... [more]
A0A6H5JFC7_9PHAE5.880e-6742.09PPIase cyclophilin-type domain-containing protein ... [more]
UPI0019FF49312.660e-6645.86DUF1565 domain-containing protein n=1 Tax=Chlorofl... [more]
A0A0G0APH1_9BACT1.370e-6545.19Beta_helix domain-containing protein n=2 Tax=Candi... [more]
A0A6H5L3G3_9PHAE1.460e-6542.41Beta_helix domain-containing protein n=1 Tax=Ectoc... [more]
A0A261GHV7_9GAMM3.850e-6341.21DUF1565 domain-containing protein n=1 Tax=Hahella ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:144114..153324 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121935.AQXX01000136_gene4114
PFAMsBeta_helix,DUF1565
Model size3728
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons8
Evalue5e-63
EggNOG OGsCOG3420@1|root,COG3420@2|Bacteria,1NHJ7@1224|Proteobacteria,1SHNB@1236|Gammaproteobacteria
DescriptionParallel beta-helix repeats
Cds size2370
COG categoryP
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.34.11prot_P-littoralis_Contig14.34.11Pylaiella littoralis U1_48polypeptideP-littoralis_Contig14 145405..153257 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789647.0105314-UTR-P-littoralis_Contig14:144113..1454041680789647.0105314-UTR-P-littoralis_Contig14:144113..145404Pylaiella littoralis U1_48UTRP-littoralis_Contig14 144114..145404 -
1680789647.1095085-UTR-P-littoralis_Contig14:153257..1533241680789647.1095085-UTR-P-littoralis_Contig14:153257..153324Pylaiella littoralis U1_48UTRP-littoralis_Contig14 153258..153324 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789647.0228248-CDS-P-littoralis_Contig14:145404..1456101680789647.0228248-CDS-P-littoralis_Contig14:145404..145610Pylaiella littoralis U1_48CDSP-littoralis_Contig14 145405..145610 -
1680789647.0318043-CDS-P-littoralis_Contig14:145970..1462891680789647.0318043-CDS-P-littoralis_Contig14:145970..146289Pylaiella littoralis U1_48CDSP-littoralis_Contig14 145971..146289 -
1680789647.0405805-CDS-P-littoralis_Contig14:146603..1467011680789647.0405805-CDS-P-littoralis_Contig14:146603..146701Pylaiella littoralis U1_48CDSP-littoralis_Contig14 146604..146701 -
1680789647.0504384-CDS-P-littoralis_Contig14:147065..1472931680789647.0504384-CDS-P-littoralis_Contig14:147065..147293Pylaiella littoralis U1_48CDSP-littoralis_Contig14 147066..147293 -
1680789647.0635946-CDS-P-littoralis_Contig14:147527..1476151680789647.0635946-CDS-P-littoralis_Contig14:147527..147615Pylaiella littoralis U1_48CDSP-littoralis_Contig14 147528..147615 -
1680789647.0732396-CDS-P-littoralis_Contig14:147876..1480021680789647.0732396-CDS-P-littoralis_Contig14:147876..148002Pylaiella littoralis U1_48CDSP-littoralis_Contig14 147877..148002 -
1680789647.0819478-CDS-P-littoralis_Contig14:148192..1493431680789647.0819478-CDS-P-littoralis_Contig14:148192..149343Pylaiella littoralis U1_48CDSP-littoralis_Contig14 148193..149343 -
1680789647.0991094-CDS-P-littoralis_Contig14:153103..1532571680789647.0991094-CDS-P-littoralis_Contig14:153103..153257Pylaiella littoralis U1_48CDSP-littoralis_Contig14 153104..153257 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig14.34.11

>prot_P-littoralis_Contig14.34.11 ID=prot_P-littoralis_Contig14.34.11|Name=mRNA_P-littoralis_Contig14.34.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=790bp
MVFGFGKDSDEEKEKKEQEAQEARKKKLAERRKNRKDDDPDTDEEEKACK
PGGRRPGKAGAKEEEEEAAGPGRPGRPGRHGKEDSEEEAEGRPGRPGRPG
RHGKAEAEEEAAAVPGHGRPGRPGRQGKEDSEEEAEGRPGRPGRHGKAEA
EEAAAAAAPGHGRPGRPGRHGKEDSEEEAEGRPGRPGRHGKAEAEEEAAA
APGHGRPGRPGRHGKEDSEEEAEGRPGRPGRHGKAEAEEEAAAAPGHGRP
GRPGRHGKEDSEEEAEGRPGRPGRHGKAEAEEAAAPGHGRPGRPGQECAE
EVDAHGRPNRPGQGGHGKAEAEGAAHAPSSTTPTEGGHGHEQNSEQAKIE
AQRKKDEAERLRLQEIAENQPQQPHQPQQPHQPHQQQQPHKSGGGAGGDM
TVKEGESIQKALDQAAPGTTISIEAGTYNESLKSRVDGTKEQPITIRGPS
SGPTAIIKGSDKSGTCVEINHDYYILDDFTIDGQINEHCSKDNVRESFRE
KCLAIRGTRNHRSLTKDNGDHYNSSVDGVIVKNMKIYNCGGEGIRLRYFV
TNCTLFHNRITSTGCFDFKFGGDQGKKNGEGIYIGTSSTQWDKNPTGEQD
ICRWNRVYENYIDTHGNECVDVKEGAMDTVIETNYCTGQLDADSGGIDSR
ASGTTIRYNKVVGCKGAGVRLGGHKVGNDQYGIACKVYCNILENNENGGI
KIMTEPHEICQNTISGKGDDVLQGVPRKCLQGLQRQRRMPLRRRPAQAGH
RDHQVVPKLQALDDRARASEKSDLAETTAVVKADQECKL*
back to top

mRNA from alignment at P-littoralis_Contig14:144114..153324-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig14.34.11 ID=mRNA_P-littoralis_Contig14.34.11|Name=mRNA_P-littoralis_Contig14.34.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=9211bp|location=Sequence derived from alignment at P-littoralis_Contig14:144114..153324- (Pylaiella littoralis U1_48)
CTTCCCACTCCCACTCCCGATTGCCTACTTCCCCTACCAGTAGACCAGCA
ACACAACTCAAGTAACCATGGTGTTCGGATTCGGAAAGGACTCTGACGAA
GAGAAGGAGAAGAAGGAGCAAGAGGCCCAAGAAGCCAGGAAGAAGAAGCT
AGCCGAGCGCCGCAAGAACCGCAAGGACGACGACCCAGACACAGACGAGG
AAGAAAAGGCCTGCAAACCAGGTGAGTCGTGATCATGGAACGATGTGATT
CAGTGGGGTTGAAGCTCGTCGGGTGGCTTGTCCGCAGGAGACAGGTCGAG
AGACGGGGGCAGACGTTTGTCATAGCACCAAGTGCTGTATATGTGTGCCA
GCCGCGGCGCGGTGCCTACGCATGCAGCGCGCTTGGCTTTCGAATGAGGT
ATGTGTGCGGTTGGTTTCTGTGGGTGCGACAAAAGGATTCTGTTCTAAAA
AGATACCCGAGGTAACTACTTGCACACACAAAGGATTAGTTTTCGTAAAG
ACCCCGCGTCCCATATGACTCCACGTGTGCGTTATCTGCGCTGTCTCCAC
GGTATCGATCCTGGATTACAGTAACGCCGAGCTGGCCGAGCCGCCCATGA
TGAAACGCTGCTCCTGCGTTGCTCCTTCTTTCGATATGATGTGTCTGGTA
TAGATGAGGTTCTCCATGTACATAAATTCTAAATGCAGGTTTGACTTCCA
CAGCTCCTTCAACTCGTCCCCTTTTTCAAAGCCTTTTCCTCTGTGCTCAT
GTGTAATATATCCATGCTCGCCCTGTATCCCCAATCTACGCCAGTGGGGT
GAACAGCTTGCAGTCTGATCCAATCGCGAGCCCGGCGCTCTCACAAACCC
ACCATCTGTCCTGCCTTGCTGTGGTGCATAAGGCCATCACAAGCTCACCA
TATGATACACATCATTCCTTTGTATCATACCGTATGCACAAGGAATGCAT
CAACCCAAACATATCACTCCTCTCAAAAGTATCCCAAAAAGTTGCCGTTG
TGACACGAAGTTGCCGTTGTGACTCGAAAGATACTTTCCTGTTTCAAAAT
CGGCTCCATTTGAACCTAGAGGAATTCCGAGGCTACACTAAAAGATGCAA
GGAATTTCGGCGTCAGATGCTGCGACAACAGACAACAGAGTACAATACAA
ACGGCGACAGCAGTAATACAGCAGCAGTAGCAAATCCTGAAGAAGAGTGA
AACGTCAAATGCCCAAGTGGAATGGTTGACTCTTCATTTTTTATTTCTCG
AGGTTTCGTTCAGATGTTCAAAAAGTCGAAAAAGCGAAAAAGGCCAGCTG
TCTATGACTTGTCATCTCTCTCAATGTCTCGATCGGTATCCAGGTCTCTC
CGCCTTTCTTCGATTGACTCGCCTTTCGTCTTTTGTCTTTTGTTTTTTGC
CCTTGGCCCTCAGACAAAACAACGACGATTTTTTCACTACTCCTGCTGTA
CTTCGTATGATACAACCAACAGTTGTTCCGTGTTTGCATTTACTCATTTG
CACATGCCCTGTAGGTACCATTTGCACCAGCAGCATTACTCGGAACATGC
CTGTAGGTACCATTTGCACCAGCAGGTTTATCTTCTGCAGGTACAGCAGC
AGCAGAGCAGTAGAACCCCTCAACCCCTCGTCTATGACACCCCCCTTCAC
TCACAATTTACAGGGTACATCGTATTCGAGTTCTTCGGTATTATGATGGG
TTGTAACGCGCGACAGAGCCGGGACCAGGGGTGGGCCCGGCGGGCACCCA
CGAGTATCTTCCCGTTGAAAAGGCTGCACAGCAGGGCGGGATAACGGCGA
AAGTTAATGTCAATCTCTCTTTCAGACTTCAGACCCATGTCTTGTTCCCT
TTTTCACAGAGATGTTAATTCGCCCCTCTTGAGCAAGACGAGGATCCAGA
CGACTTAAGGGGATGACCTTCTTTAAATCTCGTGTCCATGTTTCAGGGCG
TCACTCCGAAAAATGAGCGGCGCGTGGCGATATTTGTGCATTCCGGAGCC
CTTGGCCGGCCTAGCTATTGTATTACAGAGTTGTGTACACCCACACCATT
GTTTCCCTCTGCTTTTTTTAAAGCAAAATTGTCAAATGTCCAGCAGAAGC
TTCTACGTTGCCTGAAGATTGTCGCTGGGCCGGTGTCCATTTTTCTCGGT
ACCTTTAGCAACTGAACCCGGTTTGCCTGTGACCGCGGCAATCGTCCATG
ATCGGAGTACATACATTTCAGTACTGCAGGATGTACTGAGAGAAGAGATC
GGAATGGTTTTCAATGTGAAGACAACGCACAGAAGATATGTGCCATGTGC
CGTCTGTGTATCCGAAGAAATATTTTTTTTACCGTCAGCGATGATGACAG
TTGAATCCGCTGAGCACCACTCCGCTGTACCCCAAAAAAAGAAAACGCGG
ACCACACCTCGAAGAATGCGAAGATGTGCCACCTGCCTTTTTTATTGCGG
TGGTGTGACCCTACTGGTGGTGCGTGAGCCCTTTTTCCTTTCGACCCATA
CCTACGTGTAAGGGCGTGTCTTGGAAAAAAAACGAGGCGTGGAACGTGGA
ACGTGGAACCTAGAACAATTCTCTGATGGGCCAACCTCAGCAAGAAACGT
TCCTGGAAAGAATTTCGGCCACCGGGGTTCCTCATTTCTCGTTCCCTCCT
CCAAAATAATTGGAAGGCCTCCGTTCCTTAAAATTGTCCAAAAGCCTGTG
TGGAACGGGCTACTGGGGGGGGCAAGAAGTTCCGGTAGCTTTCTCCCTCT
ATCTGACCACAAAACCCATACCACACACACAAGGCAAACACACACATACA
CACATGCACAGCTAGCTCCCCCCACAATCATGCCACCCCGCCTAGCGCCG
CGCGTAAAATTAACCGTAATACATAAGCCCTCTCACTCGGATGAACAAAA
TCACCGCGCTGCAGCAGCAAGAAGAGCAGCAGAGAAGAAATGATCACACC
ATCGCACACCTCTGTCTGTTTGTTCCTCCGCTTTTTGGCTAAACGGGCGC
GCGGACGACTGCGGCCGGCCGACATGTAACCATCTCACACAATTGTGGGC
TATGCTGTGTGTGCGCTGTGTATTGTATGTTTGTGTATGCTCTGTGGGCG
AGAGATGGAAGATGGATGGGTTCGTGCGTGCGTTTGTGTGTGGTGTTGAA
TACTCGTAATTCTCAACGGCCACGGTACTCCTGCCGCTCTTATACTGCTA
CTTTACTTCTGTACTTGCACCACAGCAGCGACCCTCAGGCTTTTCGCTTG
CAAACGGTTCCACGTTCTACATTTCGAAATAGTATTTTTTTCAATACACA
AATCGTGGAACAGGGAACGAGGAATCTAGGTTCCACGTTCCCCGTTCCTC
GTTTTTTTCCCAAGACACGCCCTAAGCATATGATACGAAGTGGTACAAAG
TACTTCGGAATTATTTCTAAGAAGCACATATCATACCTTCGCATTCCGCT
TTTCCTCCGCGCACACGCATCCACACCTAGAGTGCCCAACGCAGACATTC
GTGGGTTTCCAGTTTCTTTGCATTGTAAATATACTGATACACAACAAATC
AGGAGTCAGCTCCGGTAGTCCTGCTTCACTACCGTATTACCGGTAAAACT
CTAACATGTTTTTTTTTTCTACCCACTTCATTTTTCCCGTCTCCTCAGTT
CATCCCCTTTCCCCGTGGACCGTGCACTTAAAAACATTGGCCGTGCCAAA
ACTAGAAAACAGTGGCCGTGCTTCACTGCTGTGTGGGCCAGCCAGCCTAC
GCCTTCGGCAAAAGCTGGTCTCACCAGTCGGGGTCACACCAGAAAGGAAC
AGACGACACAGCTCAGGCTTTTCTTTCTAATTTTCTACGCCCTCTCTCTG
CGGTGCTTGCCTCAATTTTTTCGCCGTAAGGGTTTACTCATCCGTCCCCT
TTTTTCTCGCCGAATGCTGTCCTTGAATACAAATTCCCTCTTGACGTTAC
TTCACACCATCAACGAACCAAACACAAACAGGTGGACGTCGCCCTGGTAA
GGCTGGGGCAAAGGAGGAGGAAGAGGAAGCGGCTGGGCCTGGACGCCCAG
GACGCCCCGGACGCCACGGCAAGGAAGATTCTGAGGAGGAGGCCGAAGGC
CGCCCAGGCCGCCCCGGTCGCCCTGGTCGCCACGGCAAGGCCGAGGCAGA
AGAGGAGGCGGCAGCGGTGCCGGGGCACGGACGTCCCGGTCGCCCCGGTC
GCCAAGGCAAGGAAGATTCTGAGGAGGAGGCCGAAGGCCGCCCAGGCCGC
CCCGGTCGCCACGGCAAGGCCGAGGCCGAGGAGGCGGCGGCGGCGGCGGC
GCCGGGGCACGGACGTCCCGGTCGCCCTGGACGCCATGGCAAGGAAGATT
CTGAGGAGGAGGCCGAAGGCCGCCCAGGCCGCCCCGGTCGCCACGGCAAG
GCTGAGGCAGAGGAGGAGGCGGCGGCGGCGCCGGGGCACGGACGTCCCGG
TCGCCCTGGACGCCATGGCAAGGAAGATTCTGAGGAGGAGGCCGAAGGCC
GCCCAGGCCGCCCCGGTCGCCACGGCAAGGCCGAGGCAGAGGAGGAGGCG
GCGGCGGCGCCGGGGCACGGACGTCCCGGTCGCCCTGGACGCCATGGCAA
GGAAGATTCTGAGGAGGAGGCCGAAGGCCGCCCAGGCCGCCCCGGTCGCC
ACGGCAAGGCTGAGGCAGAGGAGGCGGCGGCGCCTGGGCACGGACGTCCC
GGTCGCCCCGGCCAGGAATGTGCCGAGGAGGTGGACGCGCACGGACGCCC
CAACAGGCCGGGCCAAGGCGGCCACGGCAAGGCTGAGGCAGAGGGGGCGG
CTCATGCGCCCAGCAGCACCACCCCGACGGAGGGCGGCCACGGACACGAG
CAGAACTCCGAACAGGCCAAGATCGAGGCTCAGAGGAAGAAGGACGAGGC
CGAGCGCCTCAGGCTCCAGGAGATCGCCGAGAACCAACCGCAGCAGCCTC
ACCAGCCTCAGCAGCCCCACCAGCCCCACCAGCAGCAGCAGCCTCACAAG
AGTGGCGGCGGCGCGGGAGGAGACATGACGGTCAAGGAGGGAGAGTCCAT
CCAAAAGGCGCTTGACCAGGCCGCCCCCGGCACCACCATCAGCATCGAGG
CCGGCACCTACAACGAATCCCTCAAGTCCCGGGTACGTCCACTTTTTTTT
TTTCTACTTCCGTGCGTTCTCGAGTTGAAAAAATGACGTCATATGAGGTA
GCAGTACCAAGAATGACACAGGTTTTCTTTTGCCGTACAGTACAAATCAT
TTAGCAGCAAACATGTGATCTTTAATCATTTAGCAGCAAACATGTGATCT
TTATGCTTCCTCGTGCGTTCAGGTCGACGGCACCAAGGAGCAGCCCATTA
CCATCAGAGGTCCCAGCAGCGGCCCCACCGCCATCATCAAGGGTTCAGAC
AAGTCCGGCACCTGCGTCGAGATCAACCACGACTACTACATCCTCGACGT
GAGTTCGGTTTGGCTCCACCTACTTCTGGCGGAGTTTCACAGATGTGTTG
CTTCTGCGATCATGTTCGGCGTGTAGACTGCGTCAAGTCTGCATGATAAT
GGTCGTACCCTAGTTATGATGGTGGACGGGCGGCCGTAACACGGGCAGGT
AGGACAGAGGTATTTCCTCTCCTTGTCGTCGTTCATTTACTGTTGTGTTT
TTTTATCTCTTTTCTCTTAACCCTGTCCCTTCTTCCTCCTCCAACGAATG
ATCTCACAGGACTTCACAATCGACGGCCAGATCAACGAGCACTGCAGCAA
GGACAACGTCAGAGAGTCCTTCCGCGAGAAGTGCCTCGCCATCAGGGGTG
AGTCAACGGTACCCCCCCCCACACACACACACACACACTCCACGGACCGC
CTCCCGAAAGACAAAATGTTCCGGGGCAGCATCACCCGCATCACCGGGTC
GGGTCCATTTGAAGTTCGATTTTGCAACCGACCCCTAGCCACACCGAAAT
AAATATACCCCTTTGTATACATGCAAGCGTCATCGTCCCAATTTTGTATT
TTATTTGCCCCTTCGTGTGTGGCTCACACAGGAACCCGCAACCACCGCAG
CCTCACGAAGGACAACGGCGACCACTACAACTCTTCCGTTGACGGCGTCA
TCGTGAAGAACATGAAGATCTACAACTGCGGCGGTGAGGGCATCCGCCTC
CGGTACTTCGTCACCAACTGCACCCTGTTCCACAACCGCATCACGTCCAC
CGGGTGCTTCGACTTCAAATTCGGCGGTGACCAGGGCAAGAAGAACGGGG
AGGGCATCTGTGAGTGAACAAACGTTTTGTTTGGTTTGTTTAGTTTTCTG
CCCTTGACTACTTCATGGTATCATCTTGCGAGGGCATCTTGTGAGATTGT
ACAAAGATGACTTTTTACTCCATGCATACCATTGATGTGTGGTGTCCGAT
ATAATGAGAGACAAAGTCCTTCGTAACGCAGGCGGTGTGACTTGACAACT
GCGTGTGTAGGGGCGTGAATTTGTGTATTTGGTCTTGGGCCTGGTATCGC
GGGTACGTGAATTGGGGCCGGTTTCTTGTTTGTGGTGCTTGGAGCCTCCT
CTTGCTCACCGTTGTCATCTCATGTTGTTGCCCCAACCGCCGCTCCGCTC
ACGCTTATGTTTTTTTTTTGTAGACATCGGTACTTCCAGCACCCAGTGGG
ACAAGAACCCCACCGGCGAGCAGGACATCTGCCGCTGGAACCGCGTGTAC
GAGAACTACATCGACACCCACGTGAGTGGAAATGTGCTGGCGCTAAAAAT
ATGGTCGAGTAGAGCAAACTCGATGCGGCTGTTTCGAGAGATTACGCTCT
GAGGAAAAAAAACAAAACACGCGAAGATGAACTTGTTGCCCGAGGCCCGA
GGATGCCGTTGGTGCCTTTTTAAAGTCAGGTAGTTGTGTGACACATCCCC
CGTCGCTTGTGATTTCGTTTCGATCGCGTCGATTGCGACACTTTTGCCGT
CTTGAAAGAGTCGCGTAAAGTAAAATGAAACGAGAATAATCACGCGTAAA
ATTCACACCTGATGCGATAAAACGAATCAAAACAGGGCAACGAGTGCGTG
GACGTGAAGGAGGGGGCGATGGACACGGTGATCGAGACGAACTACTGCAC
CGGGCAGCTGGACGCGGACTCGGGCGGCATCGACTCCCGAGCCAGCGGCA
CCACCATCCGCTACAACAAGGTCGTGGGCTGCAAGGGCGCCGGCGTGCGC
CTGGGCGGCCACAAGGTCGGCAACGACCAGTACGGGATCGCCTGCAAGGT
GTACTGCAACATCCTCGAGAACAACGAGAACGGCGGGATCAAGATCATGA
CCGAGCCCCACGAGATCTGCCAGAACACCATCTCCGGCAAGGGCGACGAT
GTGCGTGCTGAGCGTGTGTGTGTGTGTGTGTCGTGTGTGTAAATTAAAAA
TGTTTTTTATGCTGGATGTTTTGAAATATCCCGTATCGCCCCATAGTTTC
CGGTTCAGAGGTCTTGGTGGAGGCGTTACCAGCTACTCGACGATGCGACG
ATTGATTTGTGTCTTTGTGTAGAGACGGAGCGCAATTCGTCAGGCTTCGC
TGTTGTGTTTCACGATCTGAACTACAAATGAAAAAATGAACGAAACGCAC
ACAGATGTCCATTTCAACAAACAATCCGGACTAAATATGGCACCTCCTTA
CAAGCACTGGTTCTAACCCCCCCCCTCCCCCGCCGCCTTTTTTTTTTAAC
TCGAACTGCGACAGTACAAGGCGTTCCGCGGAAATGCCTCCAAGGACTTC
AAAGACAACGACGAATGCCCCTTCGACGTCGACCCGCCCAAGCAGGACAT
CGAGACCACCAAGTGGTTCCAAAACTGCAAGCCCTAGATGACAGAGCGAG
AGCGAGCGAAAAAAGCGATTTGGCAGAGACTACAGCAGTAGTAAAAGCCG
ATCAGGAGTGTAAGCTATGATTTGACTGCCTTCCGAGCGACCTGCTCGAG
ATAGAGTATTGGGTATTGCACTGCCGCCTTTTTTACCTTTATGTGATGAG
AGGCCCACGCCCGGGGGGGCTTTTTTAGGCCTAGAAGCTTGAATAAAAGC
AGAGCCTAGGCTGAGAGCCAAGGCGAGAGCTAAGCTAAGCGGGGTCGAAG
GAGAGGATATGGTCGACACACAGACGGGGGGGTAGGGAAGGAAAAGAAAA
AAGGGGTCTGTCCTTTGATGTGGACGTCGCGTTGGAGTGACGGGGAAAAA
AAAATGTCGTTTCTCTTTTGTGTCCAGCCGCCCAGCAGATCTTGTTTGTG
CATGATATGACAATACATAAAAATGCCGCATAGACGATTTCCGCATGTCT
TTGCATGTTTAGAAAGACGAATTCTGTTTTTTGTGAGGCGTCGTGTCCGA
TGGGTCGGCGATTGGGGCGATTCAGTTGCCCAGGGTGTAAGGGACGCTCT
ACATTTTGTGCCTTTTGTGGTAATCATACTCCCTTGAAAAGTTGGGCAAA
CGCGTTGTTCGTTGCTACTTTCTTTGACGTAGTAAGTGAAGACCAATTTT
ATGGATTGCTTCAAATAAATGTGGTTTTTTGTGGGTGTTGCTGGTTTTTC
TAAGGTTTCCCGAAATATTGTGGAAATACCCGCGCGGTTGTCGCACTCTA
TATAGTGGGGTTGAGTTTCTTTTTTTGTACCAAGTCTCGTCAGAGTCACT
TAAGTTTGGCAATGGAGGGTGGCAGAGGTGAAATAATAACGTATATAGCA
GCAGCACCAATGTGGCGGTAGGCATGTCCACGCGATCTGCTTTGTTTTTG
TCCATGGGGGGGTCTCAAATGACTGCATGTAAAATAGTTAGATGAACCGG
TAGTTATGAACCCAAGTTGTGAAAGGAGCTTGTCGTACTCGGGAAGTGGT
CAGCGCTGGGGGCGTGGCCATTCTTACTCTTGGAATTTCTCTCGTAGACC
TGAAGCGGCCCGAGCGTGGGGTCTCGTTGACCGCAAGCGGGTACATTAAC
CAAGCTAGCGGCGACAGACGTATTTATTCTTGGGAATTTCTCATGGAAAA
CTTCGAGCGGTCTCGAGAGTTCTCCCGGCTCCTCCCACTCTCCTCGTTTT
AGTGAATCTGTTGACTTCTCGCCACACGAGAGTCGGTGCGACGTGAGGGA
GGCTACCGGTGTACAACTGTTCCCGGCATTGCTCTGCCTGTGCGCACTAA
ACGAGGAGAATCTTGTCGTGCACGTTTGGCCTTGACCGATTTCGCACAAG
AGCGTTGAAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig14:144114..153324-

>mRNA_P-littoralis_Contig14.34.11 ID=mRNA_P-littoralis_Contig14.34.11|Name=mRNA_P-littoralis_Contig14.34.11|organism=Pylaiella littoralis U1_48|type=CDS|length=2370bp|location=Sequence derived from alignment at P-littoralis_Contig14:144114..153324- (Pylaiella littoralis U1_48)
ATGGTGTTCGGATTCGGAAAGGACTCTGACGAAGAGAAGGAGAAGAAGGA
GCAAGAGGCCCAAGAAGCCAGGAAGAAGAAGCTAGCCGAGCGCCGCAAGA
ACCGCAAGGACGACGACCCAGACACAGACGAGGAAGAAAAGGCCTGCAAA
CCAGGTGGACGTCGCCCTGGTAAGGCTGGGGCAAAGGAGGAGGAAGAGGA
AGCGGCTGGGCCTGGACGCCCAGGACGCCCCGGACGCCACGGCAAGGAAG
ATTCTGAGGAGGAGGCCGAAGGCCGCCCAGGCCGCCCCGGTCGCCCTGGT
CGCCACGGCAAGGCCGAGGCAGAAGAGGAGGCGGCAGCGGTGCCGGGGCA
CGGACGTCCCGGTCGCCCCGGTCGCCAAGGCAAGGAAGATTCTGAGGAGG
AGGCCGAAGGCCGCCCAGGCCGCCCCGGTCGCCACGGCAAGGCCGAGGCC
GAGGAGGCGGCGGCGGCGGCGGCGCCGGGGCACGGACGTCCCGGTCGCCC
TGGACGCCATGGCAAGGAAGATTCTGAGGAGGAGGCCGAAGGCCGCCCAG
GCCGCCCCGGTCGCCACGGCAAGGCTGAGGCAGAGGAGGAGGCGGCGGCG
GCGCCGGGGCACGGACGTCCCGGTCGCCCTGGACGCCATGGCAAGGAAGA
TTCTGAGGAGGAGGCCGAAGGCCGCCCAGGCCGCCCCGGTCGCCACGGCA
AGGCCGAGGCAGAGGAGGAGGCGGCGGCGGCGCCGGGGCACGGACGTCCC
GGTCGCCCTGGACGCCATGGCAAGGAAGATTCTGAGGAGGAGGCCGAAGG
CCGCCCAGGCCGCCCCGGTCGCCACGGCAAGGCTGAGGCAGAGGAGGCGG
CGGCGCCTGGGCACGGACGTCCCGGTCGCCCCGGCCAGGAATGTGCCGAG
GAGGTGGACGCGCACGGACGCCCCAACAGGCCGGGCCAAGGCGGCCACGG
CAAGGCTGAGGCAGAGGGGGCGGCTCATGCGCCCAGCAGCACCACCCCGA
CGGAGGGCGGCCACGGACACGAGCAGAACTCCGAACAGGCCAAGATCGAG
GCTCAGAGGAAGAAGGACGAGGCCGAGCGCCTCAGGCTCCAGGAGATCGC
CGAGAACCAACCGCAGCAGCCTCACCAGCCTCAGCAGCCCCACCAGCCCC
ACCAGCAGCAGCAGCCTCACAAGAGTGGCGGCGGCGCGGGAGGAGACATG
ACGGTCAAGGAGGGAGAGTCCATCCAAAAGGCGCTTGACCAGGCCGCCCC
CGGCACCACCATCAGCATCGAGGCCGGCACCTACAACGAATCCCTCAAGT
CCCGGGTCGACGGCACCAAGGAGCAGCCCATTACCATCAGAGGTCCCAGC
AGCGGCCCCACCGCCATCATCAAGGGTTCAGACAAGTCCGGCACCTGCGT
CGAGATCAACCACGACTACTACATCCTCGACGACTTCACAATCGACGGCC
AGATCAACGAGCACTGCAGCAAGGACAACGTCAGAGAGTCCTTCCGCGAG
AAGTGCCTCGCCATCAGGGGAACCCGCAACCACCGCAGCCTCACGAAGGA
CAACGGCGACCACTACAACTCTTCCGTTGACGGCGTCATCGTGAAGAACA
TGAAGATCTACAACTGCGGCGGTGAGGGCATCCGCCTCCGGTACTTCGTC
ACCAACTGCACCCTGTTCCACAACCGCATCACGTCCACCGGGTGCTTCGA
CTTCAAATTCGGCGGTGACCAGGGCAAGAAGAACGGGGAGGGCATCTACA
TCGGTACTTCCAGCACCCAGTGGGACAAGAACCCCACCGGCGAGCAGGAC
ATCTGCCGCTGGAACCGCGTGTACGAGAACTACATCGACACCCACGGCAA
CGAGTGCGTGGACGTGAAGGAGGGGGCGATGGACACGGTGATCGAGACGA
ACTACTGCACCGGGCAGCTGGACGCGGACTCGGGCGGCATCGACTCCCGA
GCCAGCGGCACCACCATCCGCTACAACAAGGTCGTGGGCTGCAAGGGCGC
CGGCGTGCGCCTGGGCGGCCACAAGGTCGGCAACGACCAGTACGGGATCG
CCTGCAAGGTGTACTGCAACATCCTCGAGAACAACGAGAACGGCGGGATC
AAGATCATGACCGAGCCCCACGAGATCTGCCAGAACACCATCTCCGGCAA
GGGCGACGATGTGCTACAAGGCGTTCCGCGGAAATGCCTCCAAGGACTTC
AAAGACAACGACGAATGCCCCTTCGACGTCGACCCGCCCAAGCAGGACAT
CGAGACCACCAAGTGGTTCCAAAACTGCAAGCCCTAGATGACAGAGCGAG
AGCGAGCGAAAAAAGCGATTTGGCAGAGACTACAGCAGTAGTAAAAGCCG
ATCAGGAGTGTAAGCTATGA
back to top