prot_P-littoralis_Contig14.21.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.21.1
Unique Nameprot_P-littoralis_Contig14.21.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length224
Homology
BLAST of mRNA_P-littoralis_Contig14.21.1 vs. uniprot
Match: D7G071_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G071_ECTSI)

HSP 1 Score: 273 bits (699), Expect = 2.180e-90
Identity = 152/218 (69.72%), Postives = 165/218 (75.69%), Query Frame = 0
Query:    6 RMAAAGAGAVAAVILLCHHRAQAFFVAKLAAAGPLGHRLDVSNNLAXXXXXXXXXXQQVQRQRSAAIVRSRLEATMAPEKTETVSVLNDDGSRKTGEQIREEFFMAALTGQERGLPAGSYLNDTVESGPDVTQVSVVWQPYEDEVVAPAGSSLLKSAISCGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVPDDGRNAVEALVCNSDAAWDDMMV 223
            R  AA A A   V L    R QAFFV   A    L      S  LA             ++ R A +VR+RL ATMAPE+T+TV+VLNDDG+RK+GEQIREEFFMAA+TGQERGLP GSYLNDTVE+GP V QVSVVWQPYED+V+APAGSSLLKSA  CGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVP DGR  VEALVCNSDAAWDDMMV
Sbjct:    5 RAVAASAVAAFGVFLSHQQRGQAFFVGTPAV--DLRRTAVYSRGLAAGSIS--------KKGRRAGVVRARLTATMAPEQTDTVNVLNDDGTRKSGEQIREEFFMAAMTGQERGLPPGSYLNDTVEAGPGVEQVSVVWQPYEDKVLAPAGSSLLKSATECGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVPADGRTDVEALVCNSDAAWDDMMV 212          
BLAST of mRNA_P-littoralis_Contig14.21.1 vs. uniprot
Match: A0A2K1IZK8_PHYPA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IZK8_PHYPA)

HSP 1 Score: 70.9 bits (172), Expect = 1.010e-11
Identity = 48/122 (39.34%), Postives = 59/122 (48.36%), Query Frame = 0
Query:  116 QERGLPAGSYLNDTVESGPDVTQVSVVWQPYEDEVVAPAGSSLLKSAISCGAMVIDNTFCLTGQCEACMAEVDG--------------EVVLSCMVPVPDDGRNAVEALVCNSDAAWDDMMV 223
            +E  +P G Y  D  E G +V  V          V A  G +LLK A  CGA+VI + FC  G C  C  EV+G              E+V SC+ PVP  GR  VE  + NSD  WDD+MV
Sbjct:   52 KESAIP-GMYWGDRTEIGEEVA-VKFTTGSETVTVSANVGDNLLKVAEQCGAIVISDDFCFEGSCCHCEMEVNGGAVEVGYRAEVKGGELVRSCLCPVP-SGRRTVEVNIINSDDGWDDLMV 170          
BLAST of mRNA_P-littoralis_Contig14.21.1 vs. uniprot
Match: A9RMX1_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9RMX1_PHYPA)

HSP 1 Score: 70.9 bits (172), Expect = 2.210e-11
Identity = 48/122 (39.34%), Postives = 59/122 (48.36%), Query Frame = 0
Query:  116 QERGLPAGSYLNDTVESGPDVTQVSVVWQPYEDEVVAPAGSSLLKSAISCGAMVIDNTFCLTGQCEACMAEVDG--------------EVVLSCMVPVPDDGRNAVEALVCNSDAAWDDMMV 223
            +E  +P G Y  D  E G +V  V          V A  G +LLK A  CGA+VI + FC  G C  C  EV+G              E+V SC+ PVP  GR  VE  + NSD  WDD+MV
Sbjct:   95 KESAIP-GMYWGDRTEIGEEVA-VKFTTGSETVTVSANVGDNLLKVAEQCGAIVISDDFCFEGSCCHCEMEVNGGAVEVGYRAEVKGGELVRSCLCPVP-SGRRTVEVNIINSDDGWDDLMV 213          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.21.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G071_ECTSI2.180e-9069.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2K1IZK8_PHYPA1.010e-1139.342Fe-2S ferredoxin-type domain-containing protein n... [more]
A9RMX1_PHYPA2.210e-1139.34Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 138..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:81162..84944 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.21.1mRNA_P-littoralis_Contig14.21.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 80264..95776 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.21.1 ID=prot_P-littoralis_Contig14.21.1|Name=mRNA_P-littoralis_Contig14.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=224bp
MRSCRRMAAAGAGAVAAVILLCHHRAQAFFVAKLAAAGPLGHRLDVSNNL
AAAAAAAITSKQQVQRQRSAAIVRSRLEATMAPEKTETVSVLNDDGSRKT
GEQIREEFFMAALTGQERGLPAGSYLNDTVESGPDVTQVSVVWQPYEDEV
VAPAGSSLLKSAISCGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVP
DDGRNAVEALVCNSDAAWDDMMV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf