prot_P-littoralis_Contig14.9.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig14.9.1
Unique Nameprot_P-littoralis_Contig14.9.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length195
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig14.9.1 vs. uniprot
Match: D7G074_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G074_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.570e-21
Identity = 78/209 (37.32%), Postives = 118/209 (56.46%), Query Frame = 0 
Query:    9 DSNNRGGEEAVK---RRPTRRSGVELEINMWGLKDLPKTSTVKKAPVG--KGYTIKVDRKARNKDIRGLRRATKENDLAVSSLPVYMVTGAPRAPLEQAARDLPTRGEKREDATAASV--------GCGSSVRSTIQFGSMPV-VNIYPCHLTEAEADHYLTN------LRRDKWCSACPE--RLSHAQCTGDRSAPATPAIARTREVA 195
            +S+ R G EA+    +R TR SG+ +++N+W L+DLPKTSTVK+AP    K YT+++ R +R++D++ LRR  ++ +    S PVY +TG      ++AA  L   GE+R+DA  A+          CG+  RSTI  GS+P+ + I    L EAEAD  L +      L  +   S+ P   +L HAQ   D S  AT A++   ++A
Sbjct:   15 ESDQRTGGEAMTSGVKRATRNSGIGIDVNLWDLRDLPKTSTVKRAPKLNLKDYTVRLPRASRDQDMKLLRRTARDIEGVGESDPVYPLTGPACITRKEAAAALLALGEERDDAMVAAAKAAVSESGDCGAGARSTIADGSIPLAMGINQPLLAEAEADARLASPGVSRSLTTEDQRSSLPHPAQLYHAQGKPDSSDDATGAMSAAAKIA 223
[Close]
BLAST of mRNA_P-littoralis_Contig14.9.1 vs. uniprot
Match: A0A6H5JA29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA29_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.020e-12
Identity = 50/147 (34.01%), Postives = 76/147 (51.70%), Query Frame = 0 
Query:   21 RRPTRRSGVELEINMWGLKDLPKTSTVKKAPVG---------------------KGYTIKVDRKARNKDIRGLRRATKENDLAVSSLPVYMVTGAPRAPLEQAARDLPTRGEKRED--------ATAASVGCGSSVRSTIQFGSMPV 138
            +R TR SG+ +++N+W L+DLPKTSTVK A                        K YT+++ R +R++D++ LRRA ++N+    S PVY +TG      ++AA  L   GE+R+D        A + S  CG+   STI  G   +
Sbjct:    6 KRATRNSGIAVDVNLWDLRDLPKTSTVKSAATMNNSPDPPSPRSTTHAAPKLKLKDYTVRLPRASRDQDMKLLRRAARDNEGVGGSDPVYPLTGPACITRKEAAAALLALGEERDDEMVAXXRAAASESGDCGAGAGSTIADGESSI 152
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig14.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G074_ECTSI6.570e-2137.32Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA29_9PHAE3.020e-1234.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig14contigP-littoralis_Contig14:11443..21442 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig14.9.1mRNA_P-littoralis_Contig14.9.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig14 11443..21655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig14.9.1 ID=prot_P-littoralis_Contig14.9.1|Name=mRNA_P-littoralis_Contig14.9.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=195bp
MSRMSPSDDSNNRGGEEAVKRRPTRRSGVELEINMWGLKDLPKTSTVKKA
PVGKGYTIKVDRKARNKDIRGLRRATKENDLAVSSLPVYMVTGAPRAPLE
QAARDLPTRGEKREDATAASVGCGSSVRSTIQFGSMPVVNIYPCHLTEAE
ADHYLTNLRRDKWCSACPERLSHAQCTGDRSAPATPAIARTREVA
back to top