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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 382 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 231 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789644.6783206-CDS-P-littoralis_Contig1396:20325..20445 | 1680789644.6783206-CDS-P-littoralis_Contig1396:20325..20445 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1396 20326..20445 - |
| 1680789644.6917553-CDS-P-littoralis_Contig1396:20637..20748 | 1680789644.6917553-CDS-P-littoralis_Contig1396:20637..20748 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1396 20638..20748 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789644.7098088-UTR-P-littoralis_Contig1396:20748..20758 | 1680789644.7098088-UTR-P-littoralis_Contig1396:20748..20758 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1396 20749..20758 - |
| 1680789644.722057-UTR-P-littoralis_Contig1396:22984..23125 | 1680789644.722057-UTR-P-littoralis_Contig1396:22984..23125 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig1396 22985..23125 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1396.10.1 >prot_P-littoralis_Contig1396.10.1 ID=prot_P-littoralis_Contig1396.10.1|Name=mRNA_P-littoralis_Contig1396.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=77bp
MLSTPEKDEGGPRTRSHTTPTTSDRALESDRCAPRPRVWTPASIATLEFG
FLCWDEPNSLTSMLPVCLWLKHHKRSG back to topmRNA from alignment at P-littoralis_Contig1396:20326..23125- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1396.10.1 ID=mRNA_P-littoralis_Contig1396.10.1|Name=mRNA_P-littoralis_Contig1396.10.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2800bp|location=Sequence derived from alignment at P-littoralis_Contig1396:20326..23125- (Pylaiella littoralis U1_48)
CCCGCTGCTGCCCACTTCCATCACGCTCGCACGCGACCAAGCACGCGACG
ACCGCGACGCCAACTTCTGATCTACCTGCTGTACGCGCTACCATCAGTAC
GAGTGAGACTCTGTGCCAGGGCAGAGTTTTGTTTTTTCACGGTGAGTCTT
GTTGTCATGACCGTCCTCAGGGCAGCACCCCGGGGTAGTTCCCTACCGAA
TTCAGACTACCCTCGACGTCGCAGGCACTAGCGTCTCGCCCACCAAGGAG
GTTAGTCTCATACACCCGGTGCCGTCAGTATATGTCTCAGGCTCTCTTGG
ATAGAAGTCCGTTTGGAAATCGGACTTGTGTAGGCAGACTTCTCTCCAAA
ATGCGGACAAGAATCTCACCGTGTCGAGAGGACCCTGAGCGTTCGCCAGA
AGCAGGTTGAAGAACAATGCAGGAAAAATGGAAAATTTATTTTTGAAAAA
TCAACACACAGCCCATGGCGTGCAATCACCACCGCGCGGTACGCCAGAGC
ACGCCTCGTGCCTGCGGGTTAACAGAAAATGCTGTGGGTTACCAGAATGC
CGTCGGCTTCGGCTTTGGTGCTGTGTTGTGTATCGGTGACGAGTCACTTT
GTAGCAGGGCATTGTTGGCTAGGTAATCTGTAATCTGTAATCTGCCATCG
CTTCTGCGCCAGAGACAAGACACCATACAGACTTGAACAGACAGATCCTT
CGAGATTATCTCTTCCCACACAAAGCCGTTATCGTCCGTTCACACGCGGG
TGTGCTTGCCCACCACAGGTTTATAGCGTACGTTCGGGACCGCACGCTTC
CCAGTGCTGCGCACCGGTTTAAGGAGCGCACCTTCCGAACACCGTTCTGG
CTGCTGTGAGGGCCGAAGAAGACACAACATACCAATCTAAAACACCTCAG
CTGTAGTGTGCTGTGTTGGCTGTCGAATGAGCCCTGGTTTGTCGAGTTAG
GCGGCCTGTGGCCCTCAAATGTGACGAAAGAAAAAATCGAAGTCCGGCGG
CAAATAGGCTGCAGTTTTGTGCGGCGCAACCTCTCGCGGGTGCAGAGGCT
GCATTTCACCCGAGTACGAGAACGCATAGCACACAGCACAGATCCGTACG
AAAGTTGGCACATGGGCTCAACATACAACTAGGGGGTAGTTTGCAAGAAG
ACGCGCACCAATACGCGCTGTGGCGCACGAACGCGGCGCTTGCTTGTTAA
AAATAACGTCCGCGCGAAGGCACCATGCTTAGCTTCCTGCAAACGATTCA
GGGAGAGTGCACCGGTTTGAACAAGAGGACATTCTGAGGGTTGCTACGCA
CTTCGAATTTTGCGGGAACACCCAGTATAGGCTGAGAACGCGCAATCGGC
GCGCACCAGGTTTGAACTTAAATTTTACGTTCCGCCGACGCACACCGGCT
CTCTTCATCTTACGCGCCAAAAAGAAAAACAGATGTACTTCGTGTGTCGC
TAGACTGATTAGGTTTTTCCGCGGGCGCGCGAATCCACGGCCCCCGCGAA
TCTGCTGGGCCCCTCCTACTTTTTCGCCGGTGCGCAGCACTGTTCCTCGC
AAGCCGTTTCACCAATGTCAGCTGACTGCGGTTCAGGCTTCCGGGCAATT
TCGAATGGGTGTAGACTAGTCTTACACGTGACAAATTCTTCGTCCTGCCT
GAACTCTTCCTCACTGCCGCAAACATCGATTGACTTCTGCGCACACACTC
TATCATTCGAAGATAACAATATGCGGACCATGACCATTGCTCCCATTCCC
TGTCCTCCACAGCAGTACTTCCTTAAAGAGGCAGCGTCCCACAAGAGGAA
ATGACGTAGAATACCACCCCTCTTGCGCAAATATGAATCTGCCGTGCTCG
ATGTTTCGCGCGCTAGTGGTTTCATACTTTCCACCACTATTAATAGCTGT
TAATTTGCTTGCATTATTTGCACCCTTGTTCTGGCGAGTGTTAAAGGCTG
TATTTCAGCTGTTGTTTTTGTCACATTGAAAACCGTTCCGTTCTCTCTAT
CCAGTACCTCCAGCTGTCCGTGCTCTTCCAACACTTGCGTCGGGCGATTC
CCGTGGTCACAAGCTAACTACCCTAAGAAAAGGTATTCTAAAATAAAACA
CAATAAAAACGGACCACGGAGCCGAAAGATCAGCAAAGCAGTAGAAAGAA
GCAGCAGAAGCATATTTAAAATATAACTCAACGCATGCCGTGCTCAAGAG
GCGGGGAATGGACGGGGAGTTTGTGCATCTTAGGCCATAGGTATCTCAAT
GGCAATCAGGTATAACCTCTTGTCGCGTGAACACATGTGCATGCCTATTC
ATAAAAGCCGATGAATTCCGAATAGTTCCCATTTTTATATCGTTCACACC
GCAACGGCTACCGACAGGCTGCCGTCGATGCTTTCGACGCCGGAGAAGGA
TGAGGGAGGGCCGAGGACACGATCGCACACCACGCCCACCACGAGTGATC
GTGCATTGGAGAGCGACCGCTGCGCTCCGAGACCACGAGTAAGCCTACTT
CACCATAGAGTCCGGGGTGGGGGTGGCGGAGCATCTCTCCACCGTGAAGT
AATGTTGTTGAGGAACACACAGAGTTCCTCATAGCTTTTTTAATAGGTGT
CCCGCGTTTCCTTCCCCTGTCGTCCTCCCCACTCCCGCCCCCTCGACCCT
CGTACCTCTGTGTCGTCGTTTTTGATATAGGTGTGGACGCCCGCGTCCAT
CGCCACCTTAGAGTTTGGCTTCCTCTGTTGGGATGAACCCAACAGCCTGA
CGAGCATGTTGCCTGTGTGCCTCTGGCTCAAGCACCACAAGCGGTCAGGC
back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1396:20326..23125- >mRNA_P-littoralis_Contig1396.10.1 ID=mRNA_P-littoralis_Contig1396.10.1|Name=mRNA_P-littoralis_Contig1396.10.1|organism=Pylaiella littoralis U1_48|type=CDS|length=231bp|location=Sequence derived from alignment at P-littoralis_Contig1396:20326..23125- (Pylaiella littoralis U1_48)
ATGCTTTCGACGCCGGAGAAGGATGAGGGAGGGCCGAGGACACGATCGCA
CACCACGCCCACCACGAGTGATCGTGCATTGGAGAGCGACCGCTGCGCTC
CGAGACCACGAGTGTGGACGCCCGCGTCCATCGCCACCTTAGAGTTTGGC
TTCCTCTGTTGGGATGAACCCAACAGCCTGACGAGCATGTTGCCTGTGTG
CCTCTGGCTCAAGCACCACAAGCGGTCAGGC back to top
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