mRNA_P-littoralis_Contig1396.2.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5LCT1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCT1_9PHAE) HSP 1 Score: 128 bits (322), Expect = 1.030e-32 Identity = 65/128 (50.78%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 KNADGTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHL 384
+ G F+ +FVMLGRAAHA +SP+K + +D GHLKG W G ML +TCKDANN + VATVI KED+S Y+ L KKN +M +L KTT +TDQH AL A R+CL HLI +L
Sbjct: 166 RETTGRFRSVFVMLGRAAHAAVRSPIKVVGMDGGHLKGEWNGMMLTLTCKDANNENIHVATVIGPKEDTSLYKTLLRNCKKNLKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLILNL 293
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5KNP1_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP1_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.080e-32 Identity = 58/129 (44.96%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1 KNADGTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLP 387
++ DG+FKR+ +++ RAA A+ KF+ VD GH+KG+WKG +L+ KD NN LV VA VICDKE+S+NY +L+ MKKN ++A L SP TT+Y+D++ A+ A + R C HL + P
Sbjct: 65 RHPDGSFKRIAIVVNRAALVIARGLFKFLQVDGGHMKGTWKGMVLVAAGKDTNNNLVLVAFVICDKENSTNYEFLFSEMKKNVHLKAPLESPLTTIYSDENNGIKSAIEIEASDIIHRLCCKHLANNFP 193
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5JUM0_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM0_9PHAE) HSP 1 Score: 119 bits (299), Expect = 1.980e-29 Identity = 63/128 (49.22%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 1 KNADGTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHL 384
+ G F +FVMLGRAA A +SP+K + +D GHLKG W G ML +TCKDA+N ++ VATVI KED+S Y+ L R KN +M +L KTT +TDQH AL + A R+CL HLI +L
Sbjct: 208 RETTGRFPSVFVMLGRAARAAVRSPVKVVGMDGGHLKGEWNGMMLTLTCKDAHNEMINVATVIGPKEDTSLYKTLL-RNCKNPKMRDLLEDSKTTFFTDQHKGATCALRREAPLAQHRYCLRHLILNL 334
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5JAG6_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG6_9PHAE) HSP 1 Score: 118 bits (295), Expect = 5.420e-29 Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 1
Query: 16 TFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLPAV 393
+F+R+ +MLGRAA A +SP+K + D GHLKG W G +L +TCKDANN ++ VATVI KED+S Y+ L KKN +M +L KT +TDQH AL A R+CL H+I ++ +
Sbjct: 148 SFRRVILMLGRAARAAVRSPMKVVGKDGGHLKGEWNGMVLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTIFFTDQHKGATCALRGEAPLAQHRYCLRHIILNIEKI 273
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5K832_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K832_9PHAE) HSP 1 Score: 110 bits (276), Expect = 2.280e-26 Identity = 58/130 (44.62%), Postives = 71/130 (54.62%), Query Frame = 1
Query: 85 ICVDAGHLKGSWKGQMLLVTCKDANNTLV-----------------------------QVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLP 387
+CVDAGHLKG W G ML+ T KDA+ LV VAT ICDKE++ NY W Y MK N +M +LNSPKTT++TD+H SH PA+ A N R+CL H I+ LP
Sbjct: 66 LCVDAGHLKGDWNGMMLVATSKDADTKLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALP 195
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5KMN6_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN6_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.140e-25 Identity = 56/120 (46.67%), Postives = 69/120 (57.50%), Query Frame = 1
Query: 1 KNADGTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFC 360
+ G F+ LF MLGRAA+A +SP+K + +D HLKG W GQML +TCKDANN + VAT I E++ Y+ L KKN +M L KTT YTDQH AL A R C
Sbjct: 166 RETTGRFRSLFFMLGRAAYAAVRSPIKVVGMDGAHLKGKWNGQMLTLTCKDANNENIHVATAIGPVENTDLYKTLIRGCKKNPKMRDFLEDSKTTFYTDQHKGGKCALEGEAPLAQHRNC 285
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5K734_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K734_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.060e-23 Identity = 50/100 (50.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query: 76 LKFICVDAGHLKGSWKGQMLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLI 375
L + +D GHLKG W G ML +TCKDANN ++ VATVI KED+S Y+ L KKN +M +L KTT +TDQH AL A R+CL HLI
Sbjct: 7 LVVVGMDGGHLKGEWNGMMLTLTCKDANNEMIHVATVIGPKEDTSLYKTLLRNCKKNPKMRDLLEDSKTTFFTDQHKGATCALRGEAPLAQHRYCLRHLI 106
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5K0L7_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0L7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 1.520e-21 Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 130 MLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLP 387
ML+ T DA+N L+ VAT ICDKE++ NY W Y MK N EM +LNSPKTT++TD+H SH PA+ A R+CL H+IR LP
Sbjct: 2 MLVATGMDADNRLMHVATGICDKENADNYSWFYRMMKNNAEMAKVLNSPKTTLFTDKHLSHEPAIRVHASKPVWRWCLRHVIRRLP 87
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5L0I2_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I2_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 2.070e-21 Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 130 MLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLPAVKELCGR 411
ML+ T DA+N LV VAT ICDKE++ NY W Y MK N +M +LNSPKTT++TD+ SH P + A N R+CL H H+ A+ E G+
Sbjct: 2 MLVATGTDADNKLVHVATSICDKENTDNYSWFYRMMKNNVDMAEILNSPKTTLFTDKRKSHEPTITLHAPNTVWRWCLRH---HIKALAEASGQ 92
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Match: A0A6H5KCW3_9PHAE (MULE domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW3_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 2.720e-21 Identity = 46/86 (53.49%), Postives = 58/86 (67.44%), Query Frame = 1
Query: 130 MLLVTCKDANNTLVQVATVICDKEDSSNYRWLYGRMKKNTEMEAMLNSPKTTVYTDQHASHGPALAQFAKNCWRRFCLVHLIRHLP 387
ML+ T DA+ LV VAT ICDKE++ NY W Y MK N +M +LNSPKTT++TD+H SH PA+ A N R+CL H I+ LP
Sbjct: 2 MLVATGTDADTKLVHVATSICDKENTDNYSWFYLMMKNNVDMAEVLNSPKTTLFTDKHKSHEPAITLHAPNTVWRWCLRHHIKALP 87 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1396.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1396.2.1 >prot_P-littoralis_Contig1396.2.1 ID=prot_P-littoralis_Contig1396.2.1|Name=mRNA_P-littoralis_Contig1396.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=139bp KNADGTFKRLFVMLGRAAHACAQSPLKFICVDAGHLKGSWKGQMLLVTCKback to top mRNA from alignment at P-littoralis_Contig1396:968..2640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1396.2.1 ID=mRNA_P-littoralis_Contig1396.2.1|Name=mRNA_P-littoralis_Contig1396.2.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1673bp|location=Sequence derived from alignment at P-littoralis_Contig1396:968..2640+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1396:968..2640+ >mRNA_P-littoralis_Contig1396.2.1 ID=mRNA_P-littoralis_Contig1396.2.1|Name=mRNA_P-littoralis_Contig1396.2.1|organism=Pylaiella littoralis U1_48|type=CDS|length=417bp|location=Sequence derived from alignment at P-littoralis_Contig1396:968..2640+ (Pylaiella littoralis U1_48)back to top |