mRNA_P-littoralis_Contig1391.5.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE) HSP 1 Score: 363 bits (931), Expect = 1.260e-122 Identity = 177/264 (67.05%), Postives = 207/264 (78.41%), Query Frame = 1
Query: 19 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGA--WYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
Q+LG+GNCFD + QLS MSKSMA TFHKFC++FA EMF+EHIYLPTGTY DEVM + +LG+T A GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT FTGATNDKTI+RYD+ V IR Y +REYKLR+A+GT+ R+GC+L VDNGYHE L A YP +D AFS+ LESVRKDV CF RILKLR+ YH RE +DNIFFTCCILH+MLH+FDG+ V +EN DWTGSAG HD
Sbjct: 42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE) HSP 1 Score: 346 bits (887), Expect = 2.260e-114 Identity = 163/270 (60.37%), Postives = 207/270 (76.67%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
++L LQIL RGNCF DI +S +S AAATFH+F + FA+EM+ EHI+LPTG YQ +VM Y +LGF+ A GSTDVTH+ WGMCP+ RS+TGKEG+PT+A++VTVDH R + VT FTG+TNDK+I+RYD AV IR + +Y ++E+ + ADGT + KGCYL VDNGYH+ L + YP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILH+MLHS+D S ++E +W G+AGLH+
Sbjct: 158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE) HSP 1 Score: 339 bits (869), Expect = 3.320e-113 Identity = 164/242 (67.77%), Postives = 193/242 (79.75%), Query Frame = 1
Query: 16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHS 738
L++LG+GNCFD + QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM + +LG T A GSTDVTH+G MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT F G TNDKT +RYD+ V IR Y +REYKLR+ +GTE TR+GC+L VDNGY+E + +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILH+MLH+
Sbjct: 137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESN----------EDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.450e-110 Identity = 163/263 (61.98%), Postives = 191/263 (72.62%), Query Frame = 1
Query: 16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
L +LG+GNCFD + QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M + +LG T A STDVTH+ MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT FTGA NDKT++ YD+ V IR Y +R+YKLR+A+GTE TR+GC+ VDNGYHE DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI H+MLH+FDG+ + +EN DWTGSAG HD
Sbjct: 102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE--------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHD 338
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE) HSP 1 Score: 326 bits (836), Expect = 1.090e-107 Identity = 158/270 (58.52%), Postives = 198/270 (73.33%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
Q+L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF A+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV IR + VY +++YKL DG +F KGCYL VDNGYH+ L + P D D FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD + E +W GSAGLH+
Sbjct: 83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE) HSP 1 Score: 325 bits (832), Expect = 7.120e-106 Identity = 157/270 (58.15%), Postives = 198/270 (73.33%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
++L LQIL RGN F DI +S +S A+TFH+FCK FA E+++E++YLPTG +VM+ Y ++GF A+GSTDVTH+ WGMCP+ R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV IR + VY +++YKL DG +F KGCYL VDNGYH+ L + P D D FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD + E +W GSAGLH+
Sbjct: 174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE) HSP 1 Score: 311 bits (797), Expect = 5.250e-102 Identity = 155/269 (57.62%), Postives = 192/269 (71.38%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAG 792
++L L ILGRGNCF I Q+S MS FHKFCK+FA+EM++EHIYLP+ D VM Y +LGF+ A+GS DVTH+GW CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+ FT +TNDKT V +DA V+ IR + Y ++ + + DGT T KGCYL VDNGYH+ +L YP +D FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILH+MLH+FDG+ L EN W SAG
Sbjct: 98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE) HSP 1 Score: 315 bits (807), Expect = 1.820e-100 Identity = 169/319 (52.98%), Postives = 195/319 (61.13%), Query Frame = 1
Query: 97 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGY---------HEVSVLGA----------W--------YPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
HKFC++FA EMF+EHIYL TGTY DEVM + +LG T A GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT FTGATNDKTI+RYD+ V IR Y +REYKLR+A+GTE TR+GC+L VDNG H +++ W YP +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH C RE IDNIFFTCCILH+MLH+FDG+ V +EN DWTGSAG HD
Sbjct: 246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE) HSP 1 Score: 301 bits (770), Expect = 2.770e-97 Identity = 157/298 (52.68%), Postives = 195/298 (65.44%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGL 795
++L L ILGRGNCF I Q+S MS FHKFC++FA+EM++E I+LPT D VM Y +LGFT A+GS DVTH+ W CP+ RS+TGKEGFPT+A++VTVDHAGRAI VT+ FTG+TNDKTIV +D AV+ I +K Y ++ + + DGT T KGCYL VDNGYH+ +L + YP +D FSK LESVRKDVECFFGILKGRFRILKL + Y +E IDN+FFTC ILH+MLH+FDG+ L EN +W SAG+
Sbjct: 85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE) HSP 1 Score: 301 bits (770), Expect = 4.590e-97 Identity = 151/272 (55.51%), Postives = 192/272 (70.59%), Query Frame = 1
Query: 1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
++L L ILGRGN F I LS MS FH+FC++FA EM++EHI+LP+ D VM Y KLGF A+GSTDVTH+GW CP+ GRS+TGKEG PT+ ++VTV+HAGR + VT+ FTG+TNDKTI+ D AV IR +K Y ++ + + + DGT T KGCYL VDNGYH+ +L + YP D FSK LESVRKDVECFFGILK RFRILKL + Y +E +D +FFTCCILH+MLH+ DG+ L+E+V+W GSA L +
Sbjct: 127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1391.5.1 >prot_P-littoralis_Contig1391.5.1 ID=prot_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp QILTALQILGRGNCFDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLback to top mRNA from alignment at P-littoralis_Contig1391:14399..15777- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1391.5.1 ID=mRNA_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1379bp|location=Sequence derived from alignment at P-littoralis_Contig1391:14399..15777- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1391:14399..15777- >mRNA_P-littoralis_Contig1391.5.1 ID=mRNA_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig1391:14399..15777- (Pylaiella littoralis U1_48)back to top |