mRNA_P-littoralis_Contig1391.5.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1391.5.1
Unique NamemRNA_P-littoralis_Contig1391.5.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 363 bits (931), Expect = 1.260e-122
Identity = 177/264 (67.05%), Postives = 207/264 (78.41%), Query Frame = 1
Query:   19 QILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGA--WYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            Q+LG+GNCFD + QLS MSKSMA  TFHKFC++FA EMF+EHIYLPTGTY DEVM  + +LG+T A GSTDVTH+GW MCPFTLGRSFTGKEGFPT+A++VTVDH GR + VT  FTGATNDKTI+RYD+ V  IR    Y +REYKLR+A+GT+  R+GC+L VDNGYHE   L A   YP   +D AFS+ LESVRKDV CF        RILKLR+ YH RE +DNIFFTCCILH+MLH+FDG+ V +EN DWTGSAG HD
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 297          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 2.260e-114
Identity = 163/270 (60.37%), Postives = 207/270 (76.67%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            ++L  LQIL RGNCF DI  +S +S   AAATFH+F + FA+EM+ EHI+LPTG YQ +VM  Y +LGF+ A GSTDVTH+ WGMCP+   RS+TGKEG+PT+A++VTVDH  R + VT  FTG+TNDK+I+RYD AV  IR + +Y ++E+ +  ADGT +  KGCYL VDNGYH+   L   + YP D +D AFSK LESVRKDVECFFGI+KGRFRILKL + YH +EDIDN+FFTCCILH+MLHS+D  S ++E  +W G+AGLH+
Sbjct:  158 KVLACLQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVTKIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNMLHSYDNKSEMEEEPNWAGNAGLHN 427          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 3.320e-113
Identity = 164/242 (67.77%), Postives = 193/242 (79.75%), Query Frame = 1
Query:   16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHS 738
            L++LG+GNCFD + QLS MS+S+A A FHKFC++ A EMF+EHIYLPTGTY DEVM  + +LG T A GSTDVTH+G  MCPFTLGRSFTGKEGFPT+A+EVTVDHAGRA+ VT  F G TNDKT +RYD+ V  IR    Y +REYKLR+ +GTE TR+GC+L VDNGY+E +          +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCILH+MLH+
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYESN----------EDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHT 368          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 334 bits (856), Expect = 1.450e-110
Identity = 163/263 (61.98%), Postives = 191/263 (72.62%), Query Frame = 1
Query:   16 LQILGRGNCFD-INQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVLGAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            L +LG+GNCFD + QLS MS SMA ATFHKFC++FA EMF+EHI+ PT TY DE M  + +LG T A  STDVTH+   MCPFTLGRSFTGKEGFPT+A+EVTVDHA RA+ VT  FTGA NDKT++ YD+ V  IR    Y +R+YKLR+A+GTE TR+GC+  VDNGYHE                          DVECFFGILKGRFRILKLR+ YH RE IDNIFFTCCI H+MLH+FDG+ + +EN DWTGSAG HD
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVNDIRTESQYTERQYKLRKANGTERTRRGCFSIVDNGYHE--------------------------DVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNMLHTFDGLDLFEENTDWTGSAGHHD 338          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 1.090e-107
Identity = 158/270 (58.52%), Postives = 198/270 (73.33%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            Q+L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL VDNGYH+   L   +  P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD    + E  +W GSAGLH+
Sbjct:   83 QVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 352          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 325 bits (832), Expect = 7.120e-106
Identity = 157/270 (58.15%), Postives = 198/270 (73.33%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            ++L  LQIL RGN F DI  +S +S    A+TFH+FCK FA E+++E++YLPTG    +VM+ Y ++GF  A+GSTDVTH+ WGMCP+   R +TGKEG PT+AF+VTVDH+GR + VT+ FTGATNDKTI+RYD AV  IR + VY +++YKL   DG +F  KGCYL VDNGYH+   L   +  P D  D  FSK LES RKDVEC+FGILKGRFRI KL + +H +E IDN+FFTCCILH+MLHSFD    + E  +W GSAGLH+
Sbjct:  174 KVLACLQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVTRIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNMLHSFDNRGDMSEEPNWAGSAGLHN 443          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 311 bits (797), Expect = 5.250e-102
Identity = 155/269 (57.62%), Postives = 192/269 (71.38%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAG 792
            ++L  L ILGRGNCF  I Q+S MS       FHKFCK+FA+EM++EHIYLP+      D VM  Y +LGF+ A+GS DVTH+GW  CP+ L RS+TGKEG PT+ ++VTV+HAGRAI VT+ FT +TNDKT V +DA V+ IR +  Y ++ + +   DGT  T KGCYL VDNGYH+  +L     YP   +D  FSK LESVRKDVECFFGILKG FRI K+ +AYH +E IDN+FFTCCILH+MLH+FDG+  L EN  W  SAG
Sbjct:   98 KVLAWLTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVEKIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNMLHTFDGMDQLVENTLWVSSAG 366          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KEB6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB6_9PHAE)

HSP 1 Score: 315 bits (807), Expect = 1.820e-100
Identity = 169/319 (52.98%), Postives = 195/319 (61.13%), Query Frame = 1
Query:   97 HKFCKNFAKEMFEEHIYLPTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGY---------HEVSVLGA----------W--------YPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYH-------------------------------------C--------------------REDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            HKFC++FA EMF+EHIYL TGTY DEVM  + +LG T A GST+VTH+GW MCPFTLGRSFTGKEGFPT+A EVTVDHAGRA+ VT  FTGATNDKTI+RYD+ V  IR    Y +REYKLR+A+GTE TR+GC+L VDNG          H  +++            W        YP   +D AFS+ LESVRKDVECFFGILKGRFRILKLR+ YH                                     C                    RE IDNIFFTCCILH+MLH+FDG+ V +EN DWTGSAG HD
Sbjct:  246 HKFCRHFAAEMFDEHIYLLTGTYLDEVMGIFHQLGCTGACGSTNVTHIGWNMCPFTLGRSFTGKEGFPTIACEVTVDHAGRALAVTNGFTGATNDKTIIRYDSGVNKIRTESQYTEREYKLRKANGTERTRRGCFLIVDNGMSVPKDLCVVHHKNIVAKLPSSERVLIWWVTLIAPSKYPQSNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTGGXFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNMLHTFDGLDVFEENTDWTGSAGHHD 564          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 2.770e-97
Identity = 157/298 (52.68%), Postives = 195/298 (65.44%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYK----------------------------DREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGL 795
            ++L  L ILGRGNCF  I Q+S MS       FHKFC++FA+EM++E I+LPT      D VM  Y +LGFT A+GS DVTH+ W  CP+   RS+TGKEGFPT+A++VTVDHAGRAI VT+ FTG+TNDKTIV +D AV+ I  +K Y                             ++ + +   DGT  T KGCYL VDNGYH+  +L   + YP   +D  FSK LESVRKDVECFFGILKGRFRILKL + Y  +E IDN+FFTC ILH+MLH+FDG+  L EN +W  SAG+
Sbjct:   85 KVLAWLTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNMLHTFDGMDQLVENTNWVSSAGV 382          
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 4.590e-97
Identity = 151/272 (55.51%), Postives = 192/272 (70.59%), Query Frame = 1
Query:    1 QILTALQILGRGNCF-DINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYLPT--GTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFPTLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDREYKLRRADGTEFTRKGCYLTVDNGYHEVSVL--GAWYPGDVDDAAFSKMLESVRKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGISVLKENVDWTGSAGLHD 801
            ++L  L ILGRGN F  I  LS MS       FH+FC++FA EM++EHI+LP+      D VM  Y KLGF  A+GSTDVTH+GW  CP+  GRS+TGKEG PT+ ++VTV+HAGR + VT+ FTG+TNDKTI+  D AV  IR +K Y ++ + + + DGT  T KGCYL VDNGYH+  +L   + YP    D  FSK LESVRKDVECFFGILK RFRILKL + Y  +E +D +FFTCCILH+MLH+ DG+  L+E+V+W GSA L +
Sbjct:  127 KVLACLTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVDRIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNMLHTHDGMGGLEEDVNWVGSAELQN 398          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1391.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K796_9PHAE1.260e-12267.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAU4_9PHAE2.260e-11460.37Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE3.320e-11367.77DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K872_9PHAE1.450e-11061.98DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KY50_9PHAE1.090e-10758.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE7.120e-10658.15Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHI0_9PHAE5.250e-10257.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB6_9PHAE1.820e-10052.98DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNX4_9PHAE2.770e-9752.68DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JBE2_9PHAE4.590e-9755.51Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1391contigP-littoralis_Contig1391:14399..15777 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FSK2
PFAMsPlant_tran
Model size801
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue1.24e-89
EggNOG OGs2E2RF@1|root,2S9YA@2759|Eukaryota
DescriptionPlant transposon protein
Cds size801
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789644.1998503-CDS-P-littoralis_Contig1391:14398..146501680789644.1998503-CDS-P-littoralis_Contig1391:14398..14650Pylaiella littoralis U1_48CDSP-littoralis_Contig1391 14399..14650 -
1680789644.2183626-CDS-P-littoralis_Contig1391:15228..157771680789644.2183626-CDS-P-littoralis_Contig1391:15228..15777Pylaiella littoralis U1_48CDSP-littoralis_Contig1391 15229..15777 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1391.5.1prot_P-littoralis_Contig1391.5.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1391 14399..15777 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1391.5.1

>prot_P-littoralis_Contig1391.5.1 ID=prot_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
QILTALQILGRGNCFDINQLSLMSKSMAAATFHKFCKNFAKEMFEEHIYL
PTGTYQDEVMDCYRKLGFTTAIGSTDVTHVGWGMCPFTLGRSFTGKEGFP
TLAFEVTVDHAGRAIVVTQEFTGATNDKTIVRYDAAVQTIRNNKVYKDRE
YKLRRADGTEFTRKGCYLTVDNGYHEVSVLGAWYPGDVDDAAFSKMLESV
RKDVECFFGILKGRFRILKLRLAYHCREDIDNIFFTCCILHDMLHSFDGI
SVLKENVDWTGSAGLHD
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mRNA from alignment at P-littoralis_Contig1391:14399..15777-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1391.5.1 ID=mRNA_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1379bp|location=Sequence derived from alignment at P-littoralis_Contig1391:14399..15777- (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACAT CAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCCACA AGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATATACCTT CCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGTAAACTGGG TTTTACTACAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCA TGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCA ACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGTCGT CACCCAAGAGTTCACCGGTGCGACCAACGACAAGACGATCGTCCGCTACG ACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAG TACAAGCTCAGGAGGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTA TTTGACCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGGGCGTGGG TAGTATAGAATATCCGAACGTAGTGCGTGCTCCGTAACGCTTCTGGTTGA TGTGAAGCCCGAAAAAAAACACGCCGGTACACCGAAAGCAGACCAATGCC ATATTTGTCGGTACTGAATGAGGATCCTTATGGCATGTCGGCCCCGTGCA TCGGGCGTCGACCTTACGTAGGCAGCGGCACACCAAGGTAAAAAACATTT TGCCGCTTCGCGTTCATTCTATTTGTATTTGTCTTTGTGCTGGATCCGTT TGGACGGTTGCGTTCACGTTCTTACATTTCGAGCATACATTACCCCATTT ATAACACCAAAGGATTAAAAAAACAAATCTGCTCAGGGGTGGTCGGATGG CAAATATTGTACTTCGAAGTACAAAGTTGTAGGCATCTGTGTTCCACATG TCCACACGGTTCCTCGTTCCCCCCGAAGAGTTTGATCGTGAAAAATGTGC GTCGGGGCCTGAGGTTTCCAGAGCCTCTCCGTAGCTCACCAGCCGTCCCT TTCGACCCCTCCCGCTGCTGCTGTTGTGCCGTCGTGTGCCAAATCAACAC TGGGTCACCCTCATGGCCCCATCGAAGTACCCGGGTGACGTGGATGACGC GGCCTTCTCCAAGATGCTTGAGAGTGTGCGCAAGGATGTGGAGTGTTTCT TCGGCATTCTGAAAGGGCGCTTCAGAATCCTGAAGCTCCGCCTGGCCTAC CACTGCAGGGAAGACATCGATAACATCTTCTTCACGTGCTGCATTCTCCA CGACATGCTCCACTCCTTCGACGGCATTAGCGTGTTGAAGGAGAACGTCG ACTGGACAGGCAGCGCTGGTCTGCACGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig1391:14399..15777-

>mRNA_P-littoralis_Contig1391.5.1 ID=mRNA_P-littoralis_Contig1391.5.1|Name=mRNA_P-littoralis_Contig1391.5.1|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig1391:14399..15777- (Pylaiella littoralis U1_48)
CAGATCTTGACGGCCCTCCAGATACTCGGCAGGGGCAACTGCTTCGACAT
CAACCAGCTGTCGTTAATGAGCAAATCGATGGCGGCAGCAACGTTCCACA
AGTTCTGCAAGAACTTCGCGAAGGAGATGTTCGAGGAGCATATATACCTT
CCAACAGGAACGTACCAAGACGAAGTGATGGACTGCTACCGTAAACTGGG
TTTTACTACAGCAATCGGTTCTACCGACGTCACTCACGTCGGCTGGGGCA
TGTGTCCGTTCACCCTTGGCCGTTCTTTCACGGGCAAGGAGGGGTTTCCA
ACCCTGGCGTTCGAGGTTACCGTCGACCACGCGGGGCGCGCCATTGTCGT
CACCCAAGAGTTCACCGGTGCGACCAACGACAAGACGATCGTCCGCTACG
ACGCAGCCGTACAGACCATCAGGAACAACAAAGTGTACAAGGATCGAGAG
TACAAGCTCAGGAGGGCGGATGGCACGGAGTTCACCCGGAAAGGATGCTA
TTTGACCGTCGACAACGGCTATCACGAGGTGAGTGTATTGGGGGCGTGGT
ACCCGGGTGACGTGGATGACGCGGCCTTCTCCAAGATGCTTGAGAGTGTG
CGCAAGGATGTGGAGTGTTTCTTCGGCATTCTGAAAGGGCGCTTCAGAAT
CCTGAAGCTCCGCCTGGCCTACCACTGCAGGGAAGACATCGATAACATCT
TCTTCACGTGCTGCATTCTCCACGACATGCTCCACTCCTTCGACGGCATT
AGCGTGTTGAAGGAGAACGTCGACTGGACAGGCAGCGCTGGTCTGCACGA
C
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