prot_P-littoralis_Contig139.122.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig139.122.2
Unique Nameprot_P-littoralis_Contig139.122.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length287
Homology
BLAST of mRNA_P-littoralis_Contig139.122.2 vs. uniprot
Match: D7G4Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Z8_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 7.130e-30
Identity = 62/118 (52.54%), Postives = 83/118 (70.34%), Query Frame = 0
Query:    1 MSALSKCSPLKRKQQGSNAAAANPRALFSGGNPDWPCLDLKDCPDGRLKVCLRKKDQKEYVTCDRNVWSEKDTCKVTLSMLLASKDHPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTV 118
            M+ LSK SPLKRKQQ ++A    PRAL + G   WPC D  +  DG LKV ++KK+  +++TCD+N+W ++ +CKV+LS+L  S+DHPH C LCL DVGG PS+G  T E D RGY+ 
Sbjct:  624 MNTLSKASPLKRKQQQASAPIVKPRALLTLGVEGWPCPD-DNSTDGLLKV-VKKKNGGDFLTCDQNIWKDETSCKVSLSLLKPSQDHPHECSLCLKDVGGTPSLGTDTGETDSRGYSA 739          
BLAST of mRNA_P-littoralis_Contig139.122.2 vs. uniprot
Match: A0A6H5JXZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ5_9PHAE)

HSP 1 Score: 107 bits (266), Expect = 3.130e-24
Identity = 57/145 (39.31%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    8 SPLKRKQQGSNAAAANPRALFSGGNPDWPCLDLKDCPDGRLKVCLRKKDQKEYVTCDRNVWSEKDTCKVTLSMLLASKDHPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYHGVFSHCAGARSHDGKTFKNATVASGDIVG 152
            SP K+ +  S+ +    +  F  GNP WPC  +  C  G LK  + K +   +  CD+    +  TC+V+ S+L A    P  CQLCL  VGG PS+G+ + EK+ +G   W N H  ++ C GA++ DG+ +KNAT+A+GDIVG
Sbjct:    5 SPAKKIKSSSSTS----KRKFIAGNPLWPCPSIV-CVPGLLKA-VPKTNGGLFSPCDQKDSQDSTTCQVSCSILSARGSDPPICQLCLTSVGGTPSLGVLSGEKNSQGRDEWLNIHACWTICCGAKTSDGEKYKNATLATGDIVG 143          
BLAST of mRNA_P-littoralis_Contig139.122.2 vs. uniprot
Match: A0A6H5JLP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP4_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 7.400e-22
Identity = 57/145 (39.31%), Postives = 83/145 (57.24%), Query Frame = 0
Query:    8 SPLKRKQQGSNAAAANPRALFSGGNPDWPCLDLKDCPDGRLKVCLRKKDQKEYVTCDRNVWSEKDTCKVTLSMLLASKDHPHGCQLCLCDVGGYPSIGIPTDEKDDRGYTVWENYHGVFSHCAGARSHDGKTFKNATVASGDIVG 152
            SPLK+ +       ++ +  F  GNP WPC    +  DG LK   + K    +  CD+   ++ +TC+V+ S L     +P  C+LCL  VGG PS+G+ + EK D+G   W N H V+  CAGA + DG  +KNAT+A+G+IVG
Sbjct:    5 SPLKKIR---TEEPSSSKRKFLAGNPLWPCPS--NYCDGLLKKIPKTKGG-FFTPCDQKQSNDPNTCQVSCSFLSERGPNPVKCELCLTPVGGTPSLGVLSGEKTDQGRGEWLNIHAVWKLCAGATTSDGGKYKNATLATGEIVG 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.122.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G4Z8_ECTSI7.130e-3052.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXZ5_9PHAE3.130e-2439.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLP4_9PHAE7.400e-2239.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 220..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..258
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..22

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:476194..483637 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.122.2mRNA_P-littoralis_Contig139.122.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig139 475217..483845 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig139.122.2 ID=prot_P-littoralis_Contig139.122.2|Name=mRNA_P-littoralis_Contig139.122.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=287bp
MSALSKCSPLKRKQQGSNAAAANPRALFSGGNPDWPCLDLKDCPDGRLKV
CLRKKDQKEYVTCDRNVWSEKDTCKVTLSMLLASKDHPHGCQLCLCDVGG
YPSIGIPTDEKDDRGYTVWENYHGVFSHCAGARSHDGKTFKNATVASGDI
VGSENIRRGACAGTERPPSPRTSTPGAPARLRPGSSWLRTGWTPPCTSSA
PSVSGGRLSTTTFSRRRTSRTSAPHPRRKRPSPPPPSRRLSRISEGDSTS
AESTPRDTLMTVSRCAERVGQLRGCVVLYLELPACP*
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