mRNA_P-littoralis_Contig139.110.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig139.110.1
Unique NamemRNA_P-littoralis_Contig139.110.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: D8LRQ3_ECTSI (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ3_ECTSI)

HSP 1 Score: 648 bits (1672), Expect = 5.970e-223
Identity = 343/407 (84.28%), Postives = 362/407 (88.94%), Query Frame = 2 
Query:  230 MALGTESIGLLLRLFSVLVVAEAFVATPRFPTTGSGGCARR-----------SSKRADALSTSMAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG 1417
            MALGT ++GLLLRLFSVLVVAEAFV TPR                       S++RAD     ++ AAG PV GKSMLRSRAVGIGSSAP TV+PN+DLEELVETSDEWIATRTGIRKRHLLK+GEGV++LAI+AS  AL+LAGVDGADIDLVVMATSSPDDMFGDACVVAN+VGAK AVAFDLTAACSGFLF LVTASQF+HSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDD AGLLGFSLHSDGGGHKSLTL YDGEER LGD YAV+KG+YG+LGM GREVYKFATREVP+VLTEALDNAGM V DVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG
Sbjct:    1 MALGTATVGLLLRLFSVLVVAEAFVTTPRXXXXXXXXXXXXXXXXXXXXXXXSTRRAD-----VSMAAGEPVPGKSMLRSRAVGIGSSAPDTVLPNADLEELVETSDEWIATRTGIRKRHLLKEGEGVTDLAISASNKALKLAGVDGADIDLVVMATSSPDDMFGDACVVANSVGAKSAVAFDLTAACSGFLFALVTASQFIHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDTAGLLGFSLHSDGGGHKSLTLGYDGEERKLGDKYAVTKGRYGSLGMEGREVYKFATREVPRVLTEALDNAGMGVEDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG 402
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A836CD86_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD86_9STRA)

HSP 1 Score: 469 bits (1206), Expect = 1.920e-153
Identity = 249/376 (66.22%), Postives = 295/376 (78.46%), Query Frame = 2 
Query:  287 VAEAFVATPRFPTTGSGGCARRSSKRADALSTSMAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDG-EERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            VA AFV  P  PT  SG   +R       LS S       PV GKS+L+ R +G GS AP   + N +LE++VETSDEWI TRTGI+ RH+L  G G+S++A  A + A++ AGVD +DIDLV++A+SSPDD+FGDA  +A AVG +G VAFDLTAACSGFLF  VTASQFL +GTYK+ LV+GADALSRWV+WDDRN+CILFGDGAGA+V+EA E  D +G+LGF+LHSDGGGH+SL L Y G +E  LG   +V+ G+Y  + MNGREVYKFATREVP VL EALDNAG+ V DVD+LLLHQANIRIME VA RLG+ MDKVITNL+EYGNTSA SIPLALDEAVRSGKVK GDVIACAGFGAGLSWGAA+++W
Sbjct:   16 VAHAFVGAP-VPTGSSGRVQQRH------LSMSS------PVAGKSLLKGRLIGSGSYAPPNTVSNLELEKVVETSDEWITTRTGIKNRHVLASGAGLSDIAAEAGRRAIQAAGVDASDIDLVILASSSPDDLFGDATTIAAAVGNQGLVAFDLTAACSGFLFATVTASQFLTTGTYKRALVLGADALSRWVEWDDRNTCILFGDGAGAVVIEACEEAD-SGILGFALHSDGGGHESLKLGYKGTKETPLGGGKSVTTGQYAAISMNGREVYKFATREVPAVLLEALDNAGLGVEDVDFLLLHQANIRIMEAVAQRLGMSMDKVITNLSEYGNTSAASIPLALDEAVRSGKVKKGDVIACAGFGAGLSWGAAILKW 377
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A7S2XVR1_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVR1_9STRA)

HSP 1 Score: 457 bits (1175), Expect = 3.050e-148
Identity = 226/337 (67.06%), Postives = 275/337 (81.60%), Query Frame = 2 
Query:  407 PVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGD--NYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            PV GKS+L+++A GIGSSAP+ V+ N DL  +++T+DEWI TRTGI  RH+LK GE ++E  + A+K ALE+AGVD AD+D+V++ATSSPDDMFGDA ++A+++GA  AVAFDLTAACSGFLFG+VTASQFLHSG YK  LV+G+DALSRWVDW+DRNSCILFGD AGAMV++++E  +G  +LGFS+HSDGGG  SLT+ Y+GE + L       V+   Y  L M G++VYKFATREVP V+ EAL+NAGM    VDW++LHQANIRIME VA RLG+PMDKVI NL EYGNTSA SIPL LDEAVR G+VK GDVIACAGFGAGLSWGAA+ RW
Sbjct:   81 PVAGKSLLKAKATGIGSSAPTVVVSNDDLSTMMDTNDEWIRTRTGIGNRHILKPGETLAEHQVNAAKKALEMAGVDAADVDIVILATSSPDDMFGDAPLLASSIGAGKAVAFDLTAACSGFLFGMVTASQFLHSGAYKTALVLGSDALSRWVDWEDRNSCILFGDAAGAMVMQSSEESEGPSILGFSMHSDGGGKDSLTMVYNGESKTLPGPKGVEVTSASYAPLYMEGKDVYKFATREVPIVIKEALENAGMTADQVDWIVLHQANIRIMEIVAKRLGMPMDKVIANLDEYGNTSAASIPLCLDEAVRRGQVKKGDVIACAGFGAGLSWGAAIFRW 417
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A0M0JBU9_9EUKA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBU9_9EUKA)

HSP 1 Score: 450 bits (1157), Expect = 4.120e-146
Identity = 227/342 (66.37%), Postives = 275/342 (80.41%), Query Frame = 2 
Query:  398 AGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNY--AVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG 1417
            AGG V     LR+  +GIG++AP   +PNS+LE++V+TSDEWI+ RTGI  RHL+   +G+++LA  A+K ALE AGVD  ++ LV+MATSSPDD+FGDA  VA +VGA  AVAFDLTAACSGFLFG+ TASQFLH+G YK  +VIGADALSRWVDW DRN+C+LFGDGAGA+VL+       AG+LG+ +HS+G G   L L Y+GE ++LG      V+KG Y  + MNG+EVYKFAT  VP+VL EALDNAG+   DVDWLLLHQANIRIMETVA +LG+PM+KVITNLAEYGNTSAGSIPLAL+EAV++GKVK GDVIACAGFGAGLSWG+A+IRWSG
Sbjct:   40 AGGVVAAHGELRASIIGIGAAAPERRVPNSELEKVVDTSDEWISQRTGISCRHLIAPDQGLADLASKAAKEALEHAGVDPLEVGLVIMATSSPDDLFGDAAFVARSVGATNAVAFDLTAACSGFLFGINTASQFLHNGAYKTAIVIGADALSRWVDWTDRNTCVLFGDGAGAVVLQQTAAGQPAGILGYEMHSNGAGRSDLNLGYNGESKDLGTTIPATVTKGAYTPIAMNGKEVYKFATTCVPEVLKEALDNAGLTADDVDWLLLHQANIRIMETVAKKLGIPMEKVITNLAEYGNTSAGSIPLALNEAVKAGKVKPGDVIACAGFGAGLSWGSAIIRWSG 381
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A7S2B1A0_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B1A0_9STRA)

HSP 1 Score: 449 bits (1154), Expect = 5.270e-145
Identity = 235/354 (66.38%), Postives = 277/354 (78.25%), Query Frame = 2 
Query:  365 ADALSTSMAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEEL--VETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGD--DGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDN-YAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            AD +S ++   A  P  GKS L  R   IG+ A   +MPNSDLE +  +ET+DEWI++RTGI  RHLL  G G+ ELA TA+  ALE + V   DIDLV++ATSSPDD+FGDA  VA ++GA  AVAFDLTAACSGFLF LVT SQFLH+G YK  +V+GADALSRWVDWDDRNSCILFGDGAGAM+LE + GD  D  GLLGF +HS+G   + LTL Y G+   L D  + V++G Y  +GMNGREVYKFATREVP VL EA+ NAG+ V DVDWL+LHQANIRIME VASRLG+PMDKVITNL+E+GNTSAGSIP+AL+EAVR+GKVK GDVIA AGFGAGLSWG+A+IRW
Sbjct:   72 ADEISEAVEVVASTPKPGKSNLSLRPTSIGACAAPQIMPNSDLEAMAHLETTDEWISSRTGISARHLLPTGMGLKELATTAAMQALEGSTVAAEDIDLVIVATSSPDDLFGDAAAVAASIGATNAVAFDLTAACSGFLFALVTGSQFLHNGAYKNAIVVGADALSRWVDWDDRNSCILFGDGAGAMLLEGSSGDSPDDFGLLGFEMHSNGKDQRHLTLGYQGDTVELADGKHTVTRGAYAPIGMNGREVYKFATREVPNVLNEAIANAGLTVDDVDWLVLHQANIRIMEIVASRLGIPMDKVITNLSEHGNTSAGSIPIALEEAVRTGKVKKGDVIAMAGFGAGLSWGSAIIRW 425
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A7S3C556_9EUKA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C556_9EUKA)

HSP 1 Score: 444 bits (1143), Expect = 1.090e-144
Identity = 228/342 (66.67%), Postives = 270/342 (78.95%), Query Frame = 2 
Query:  386 MAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            MAAAAG     +S LR+R VG GS AP T + N+DLE +VET+DEWI  RTGI+ RHLLK  E + +L+ TA++ ALE AG+   D+DLV++ATSSPDD+FGD   VA+A+GA  AVAFDLTAACSGFLFG+ TA+QFLH+G YK  +V+GADALSRWVDWDDRN+C+LFGDGAGA VL AAE D  AGLLGF +HS+G G   L  +Y G  R L     V+ G Y  L MNG+EVYKFAT  VP+VL EAL+NAG+   +VDWLLLHQANIRIMETVA ++G+P DKV+TNL E+GNTSAGSIPLALDEAVRSGKVK GDVIA AGFGAGLSWG+A+IRW
Sbjct:    1 MAAAAGI----RSSLRARLVGTGSCAPETRVTNADLEAIVETNDEWITKRTGIQSRHLLKPDENLCDLSATAARRALESAGIAAEDVDLVIVATSSPDDLFGDGPYVASAIGATKAVAFDLTAACSGFLFGVNTAAQFLHTGAYKTAVVVGADALSRWVDWDDRNTCVLFGDGAGAAVLIAAESDSEAGLLGFEMHSNGAGRPELNCAYAGSARKLASITQVTSGDYADLAMNGKEVYKFATGRVPEVLAEALENAGVTADEVDWLLLHQANIRIMETVAKKIGIPFDKVLTNLNEFGNTSAGSIPLALDEAVRSGKVKKGDVIAMAGFGAGLSWGSAIIRW 338
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: I2CQW7_NANGC (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQW7_NANGC)

HSP 1 Score: 446 bits (1148), Expect = 4.530e-144
Identity = 225/339 (66.37%), Postives = 274/339 (80.83%), Query Frame = 2 
Query:  410 VHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNY---AVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG 1417
            V G+S LR++ +G+GS+AP  V+ N+DLE +VETSDEWI TRTGI +R +L  G  +  LA TA+  AL  AG++G DIDLVV+ATSSPDD+FGDA  VA AVGA  AVAFDLTAACSGFLFG+V+ASQFLHSG Y++ LV+GADALSRWVDW+DRNSCILFGDGAGA+VLEAAEG++ +G+LGF++HSDG G   L L +  ++     +       KGKY  + MNG+EVYKFATR+VP V+ EAL NAG+ V +VDWLLLHQANIRIM+ VA RLGL  DK++TNL+EYGNTSAGSIPLALDEAV++ KVK GD+IACAGFGAGLSWG+A+IRW G
Sbjct:   91 VPGRSFLRAKPIGVGSAAPEDVITNTDLESIVETSDEWIFTRTGISQRRILTSGGQIRALAATAAARALASAGLEGKDIDLVVLATSSPDDLFGDATSVAAAVGATQAVAFDLTAACSGFLFGVVSASQFLHSGCYRRALVVGADALSRWVDWEDRNSCILFGDGAGAVVLEAAEGEEDSGVLGFAMHSDGTGQGDLNLQFSRDDSQSPPSIREVTPYKGKYNNIAMNGKEVYKFATRKVPTVIEEALANAGLGVENVDWLLLHQANIRIMDVVADRLGLSKDKILTNLSEYGNTSAGSIPLALDEAVKAAKVKKGDIIACAGFGAGLSWGSAIIRWQG 429
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A7S0LFJ0_9EUKA (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LFJ0_9EUKA)

HSP 1 Score: 438 bits (1126), Expect = 1.960e-141
Identity = 221/333 (66.37%), Postives = 272/333 (81.68%), Query Frame = 2 
Query:  416 GKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLE-AAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            G+  LR+R VG+GS AP T + NSDLE LVETSDEWI+ RTGIR+RHLLK  E ++++A TA++NALE AGV   +++L++MATS+PDD+FGDA  +A+ +GA  AVAFDLTAACSGFLFG+ TA+QFLH+G Y   LVIG DA+SRWVDW DRN+C+LFGDGAGA V++  AEG++G  +LGF +HSDG G   L L+YDGEE  LGD  +V++G Y  + MNG+EVYKFAT +VPKV+ EAL+ A M   D+DWLLLHQAN+RIMETVA +LG+PM+KVI N+ EYGNTSAGSIPLALD AVRSGKVK GD+IA +GFGAGLSWGAAVIRW
Sbjct:   56 GRRALRARLVGVGSHAPGTSISNSDLELLVETSDEWISKRTGIRRRHLLKPHESMTDVAATAARNALENAGVAAEEVNLIIMATSTPDDLFGDAPFLASEIGATNAVAFDLTAACSGFLFGVNTAAQFLHNGVYSTALVIGGDAMSRWVDWSDRNTCVLFGDGAGAAVMKRTAEGEEG--VLGFQMHSDGSGRCDLNLAYDGEEVPLGDVTSVTRGGYKGIAMNGKEVYKFATSKVPKVVGEALEAASMTADDIDWLLLHQANVRIMETVAKKLGIPMEKVICNVDEYGNTSAGSIPLALDGAVRSGKVKKGDLIAVSGFGAGLSWGAAVIRW 386
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A7S0HZ78_9CRYP (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=2 Tax=Geminigeraceae TaxID=589343 RepID=A0A7S0HZ78_9CRYP)

HSP 1 Score: 439 bits (1128), Expect = 2.040e-141
Identity = 217/332 (65.36%), Postives = 269/332 (81.02%), Query Frame = 2 
Query:  416 GKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSDGGGHKSLTLSYDGEERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            G+  +++R +GIG +AP+ V+ N D+E++VET+DEWI+TRTGI KRH+L   E + +LAI A K A+  AGV   +IDLV++ATSSPDDMFGDA  VA A+G   A AFD+TAACSGFLF  VTASQFL++G +KK LVIGADALSRWVDW+DRN C+LFGDGAGAMVL A E  +  G+LGF++HSDG G+ +L L Y GE++ +G  + V++G Y ++GM G+E+YKFATREVPKVL EALDNAG++  DVDWLLLHQANIRIM+ VA RLG+PM+KV+ NL EYGNTSA SIPLAL EA+ SG+VK GDVIACAGFGAGLSWGA V+RW
Sbjct:   76 GRGQMKARPIGIGHAAPAAVITNKDMEKIVETTDEWISTRTGIEKRHVLGGEEILRDLAIRAGKAAVANAGVKPEEIDLVILATSSPDDMFGDAPAVAQAIGVTNAFAFDITAACSGFLFATVTASQFLNNGGHKKALVIGADALSRWVDWEDRNVCVLFGDGAGAMVLTATESVEEGGILGFAMHSDGSGYCNLHLKYAGEKKQVGPEHVVTQGSYTSIGMVGKEIYKFATREVPKVLEEALDNAGLKTEDVDWLLLHQANIRIMDVVAQRLGIPMEKVLHNLEEYGNTSAASIPLALAEAIASGQVKKGDVIACAGFGAGLSWGATVMRW 407
[Close]
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Match: A0A8J6C7L1_DIALT (Beta-ketoacyl-[acyl-carrier-protein] synthase III n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7L1_DIALT)

HSP 1 Score: 437 bits (1124), Expect = 4.450e-141
Identity = 234/374 (62.57%), Postives = 283/374 (75.67%), Query Frame = 2 
Query:  323 TTGSGGCARRSS---KRADALSTS-MAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIATRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPDDMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCLVIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGA------GLLGFSLHSDGGGHKSLTLSYDGEERNLGDNY-AVSKGKYGTLGMNGREVYKFATREVPKVLTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYGNTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRW 1411
            TTG+GG AR +    +R  AL+ + + A+A  P  G+S L  R  G+G++AP +   N+DLE +VETSDEWI+ RTGI  RHLL     +S LA+ A++ ALE AGV  AD+DLV++ATSSPDD+FGDA +VA+A+GA  AV FDLTAACSGFLF LVTA+QF+H+G Y   +VIGADALSRWVDWDDRN+CILFGDGAGA+V+  A            GLLGF L SDG G   L L Y GE R+L +   AVSKG YG + MNG+EVYKFA  +VP +L +AL NAG+   DVD LLLHQANIRI+E VASRLG+PM KVI+NL+EYGNTSA SIPLAL+EAV+SG+VKSGDVIACAGFGAGLSWGAA+IRW
Sbjct:   17 TTGAGGAARLAQPGGRRVTALARARVGASALAPAPGRSALAVRITGVGAAAPESRATNADLESVVETSDEWISKRTGISSRHLLSADGSISALAVAAARGALESAGVPAADVDLVILATSSPDDLFGDAAMVASALGANAAVGFDLTAACSGFLFALVTAAQFVHTGAYANVVVIGADALSRWVDWDDRNTCILFGDGAGAVVVRRAVAPAAGAAPAPPGLLGFELRSDGAGRSELNLGYKGERRDLSERAGAVSKGSYGHIEMNGKEVYKFACSKVPDILEKALANAGLSAADVDHLLLHQANIRIIEAVASRLGIPMSKVISNLSEYGNTSAASIPLALNEAVKSGQVKSGDVIACAGFGAGLSWGAAIIRW 390
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.110.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ3_ECTSI5.970e-22384.28Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A836CD86_9STRA1.920e-15366.22Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A7S2XVR1_9STRA3.050e-14867.06Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A0M0JBU9_9EUKA4.120e-14666.37Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A7S2B1A0_9STRA5.270e-14566.38Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A7S3C556_9EUKA1.090e-14466.67Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
I2CQW7_NANGC4.530e-14466.37Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A7S0LFJ0_9EUKA1.960e-14166.37Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A7S0HZ78_9CRYP2.040e-14165.36Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]
A0A8J6C7L1_DIALT4.450e-14162.57Beta-ketoacyl-[acyl-carrier-protein] synthase III ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:440723..451264 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2903.EOD42144
PFAMsACP_syn_III,ACP_syn_III_C
Model size3093
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC02729,RC02888
KEGG koko:K00648
KEGG ReactionR10707
KEGG Pathwayko00061,ko01100,ko01212,map00061,map01100,map01212
KEGG ModuleM00082,M00083
Hectar predicted targeting categorychloroplast
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464
Exons10
Evalue2.75e-143
EggNOG OGsCOG0332@1|root,2QUK2@2759|Eukaryota
Ec32 ortholog descriptionbeta-ketoacyl synthase
Ec32 orthologEc-12_000650.1
EC2.3.1.180
Descriptionbeta-ketoacyl-acyl-carrier-protein synthase III activity
Cds size1191
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000,ko01004
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.110.1prot_P-littoralis_Contig139.110.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig139 440952..449591 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789643.4480777-UTR-P-littoralis_Contig139:440722..4409511680789643.4480777-UTR-P-littoralis_Contig139:440722..440951Pylaiella littoralis U1_48UTRP-littoralis_Contig139 440723..440951 +
1680789643.576585-UTR-P-littoralis_Contig139:449591..4512641680789643.576585-UTR-P-littoralis_Contig139:449591..451264Pylaiella littoralis U1_48UTRP-littoralis_Contig139 449592..451264 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789643.4675868-CDS-P-littoralis_Contig139:440951..4410171680789643.4675868-CDS-P-littoralis_Contig139:440951..441017Pylaiella littoralis U1_48CDSP-littoralis_Contig139 440952..441017 +
1680789643.4817479-CDS-P-littoralis_Contig139:444494..4447671680789643.4817479-CDS-P-littoralis_Contig139:444494..444767Pylaiella littoralis U1_48CDSP-littoralis_Contig139 444495..444767 +
1680789643.4908025-CDS-P-littoralis_Contig139:445459..4455431680789643.4908025-CDS-P-littoralis_Contig139:445459..445543Pylaiella littoralis U1_48CDSP-littoralis_Contig139 445460..445543 +
1680789643.5034058-CDS-P-littoralis_Contig139:446188..4463551680789643.5034058-CDS-P-littoralis_Contig139:446188..446355Pylaiella littoralis U1_48CDSP-littoralis_Contig139 446189..446355 +
1680789643.5115645-CDS-P-littoralis_Contig139:446624..4467641680789643.5115645-CDS-P-littoralis_Contig139:446624..446764Pylaiella littoralis U1_48CDSP-littoralis_Contig139 446625..446764 +
1680789643.5266204-CDS-P-littoralis_Contig139:447179..4473371680789643.5266204-CDS-P-littoralis_Contig139:447179..447337Pylaiella littoralis U1_48CDSP-littoralis_Contig139 447180..447337 +
1680789643.5366027-CDS-P-littoralis_Contig139:447784..4478621680789643.5366027-CDS-P-littoralis_Contig139:447784..447862Pylaiella littoralis U1_48CDSP-littoralis_Contig139 447785..447862 +
1680789643.5482702-CDS-P-littoralis_Contig139:448225..4482821680789643.5482702-CDS-P-littoralis_Contig139:448225..448282Pylaiella littoralis U1_48CDSP-littoralis_Contig139 448226..448282 +
1680789643.558795-CDS-P-littoralis_Contig139:448783..4488671680789643.558795-CDS-P-littoralis_Contig139:448783..448867Pylaiella littoralis U1_48CDSP-littoralis_Contig139 448784..448867 +
1680789643.5671492-CDS-P-littoralis_Contig139:449507..4495911680789643.5671492-CDS-P-littoralis_Contig139:449507..449591Pylaiella littoralis U1_48CDSP-littoralis_Contig139 449508..449591 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig139.110.1

>prot_P-littoralis_Contig139.110.1 ID=prot_P-littoralis_Contig139.110.1|Name=mRNA_P-littoralis_Contig139.110.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=397bp
MALGTESIGLLLRLFSVLVVAEAFVATPRFPTTGSGGCARRSSKRADALS
TSMAAAAGGPVHGKSMLRSRAVGIGSSAPSTVMPNSDLEELVETSDEWIA
TRTGIRKRHLLKQGEGVSELAITASKNALELAGVDGADIDLVVMATSSPD
DMFGDACVVANAVGAKGAVAFDLTAACSGFLFGLVTASQFLHSGTYKKCL
VIGADALSRWVDWDDRNSCILFGDGAGAMVLEAAEGDDGAGLLGFSLHSD
GGGHKSLTLSYDGEERNLGDNYAVSKGKYGTLGMNGREVYKFATREVPKV
LTEALDNAGMEVGDVDWLLLHQANIRIMETVASRLGLPMDKVITNLAEYG
NTSAGSIPLALDEAVRSGKVKSGDVIACAGFGAGLSWGAAVIRWSG*
back to top

mRNA from alignment at P-littoralis_Contig139:440723..451264+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig139.110.1 ID=mRNA_P-littoralis_Contig139.110.1|Name=mRNA_P-littoralis_Contig139.110.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10542bp|location=Sequence derived from alignment at P-littoralis_Contig139:440723..451264+ (Pylaiella littoralis U1_48)
GCTGGTTTCCCGAGAGGTGGCGCTGGTGACGGGTGCGACGGACGTTTTCC
GAGCGAAACCAAATCATGGAACCCCCGGTTTTCGACGGTGGGTGCACGTG
TAGCGTGTGCAGAACGAGCTAGCCCTCTCACAACGGCTTGGTCGATTAGT
TTAGGTGGTACTGCGGTGCCGTGCGCAGCAACAGTAGGCAGGAGAGACAC
TCTACACGAGGCCGTCTAATTTTTCCGGGATGGCGCTGGGGACGGAGTCT
ATCGGGTTGCTGCTGAGATTGTTCTCGGTCCTCGTTGTTGCAGAGGTAAG
ATTTTGGTAGATTTCTGACCCAAAACCAACGCCTTTTTCCATCGACAGCG
TTTTCGGTGGGAGCGGTAGAGAGACGGAGAGGGAGAGGAGCAGGACGAGG
CTGCCACGAGAGTGTTTGCTCTGTCCACCGGTAGCAGCAGCACTTGTGTC
GGTGATACTGTCTACCCTGCGGGATCGTACATGCATGTTCGGGTGTGCGT
GTGAGACTAGATGGTTCTCCCGTTTGATGTCGAGATTTCGTACAGCAGTA
CACACATGATGTTGCTCGTGCGAAACTGCCGATCATACACCTCCAGGAAC
CAGCAGCACATCTGTAGCACGAGCAGCAGCAAGCAGCAGCAGTAGCAACA
CCTCTCCCACCCTCTTGACAAGCTGATCTGGCTCTTCTACCCTGATCTCG
GCTTCGCTCTGGGTGTTTCAGTCTGTGCTTCGTCAAGACAGCATGCGCTT
TTGGTGAGTGTCATTATGCCGTACACAAGTACCGCCGTGAACACAGCAAA
CAGCAGTGTTATTTTCCCAACGATGCAGTGCACGGGCGGGACCTGTCCGC
GTCTCCCATTGTCCACGAGGATAAACTTCTCATCATTGACGCACTCCCCA
CGTTTTGCAGACATACCGACATGCTTCGTACATATCATGTGGTGCATACA
ACAACCTATTGAGCTACTGCGTTAAGGGTACTGCTGGGCCTATCTTATGG
TTTGGTCCTCCGAACACACAACTTACAAGTATTCAAATCAAGAAACTGCG
ACGCATCGCGAAATGGAGTAGAGTTGGTATACAGCAGTGCTGTAGATACG
CGGATACCAGAGACGGGTACTCGAACTCGTACACGAACAGGAGATAGCCC
TACGAAATGTGTGTTGTGTGTTGTACTGCTGCTGTACGGCTGTACGTCTA
CTGCTGTATACCCGGAGTATTAAACTTCATGACTTTTTGTATATATCATA
CAAGTACGCACTCTTATATATTGTTGTTGTTGTCTTCACATTTATTAAAA
ACCTTCCGATCTCTCCTCAGTACCTTCTAATGTCCGTACTCCACCGGTCA
CAGCCTGCTTGCCCCAAAAGAGGTACTTGTATATGGTACTCGGGAGATCC
CCTCAGTCCACCAAACGAAGGCACGACAAGGAAGCTCCGCCAAAAACAAA
AACGGATGCCCGAGAAATCACACAACGCCGAACGCTGTACAAAAATAGAA
CAAGAAAAGGGAACCTGGTTCAGAGCCAAGTCACAAAATGAAATAAAAAG
TCAAAAATGAAGTAAAAAGTAAAAAGTCACATGGGATGACAAAAAAAGAC
AAGAGAGACCGAATTCAGTTGCCCAGGTGTCGATACAAATGGGCACCGGG
CGTGCTACTCTCTTCGCCGGCCCAGCAAAAGTTTCAGGCAGCGCGAGTAA
GCAGGCGTGAAGGGGGGCAAAAGGCAGAAGGGGAGAAAAACAGACAACAC
AAAAAGAAAACTTCGAAGGACGTGGTGACTCAGTCCACGGTAACTCATCA
AACAGGGGGGGGCGCACTGATGCAGTGGGGAAACGGATGGGAAGGCTTAG
TGCTATCACAGCAGTGTCAATCAATCTGGTGCATATGCCGTGCTACTCTT
TCCATCAATTCCCTCTCGCTCTCCTCTGCCGCCGTCGTCTCATCATTTCG
GGTCTTTCTACGCTTGCTTCCTCGAGCTTCCCCCTCCCCCCTCCTCCTCC
TCCTCCTCCTCGATTTTCTCCTTGCTTGTTGTGCTGAGTCCTCTCCCCGA
GTCCTCTCCCCGTTTGCTTTCCTGCACGTTTCCTGCTTGCCTCCTTCTCG
TCCTTGTGCCAAGCGGTCATAAACCGCGCAGCCCCCTTCACCACCCCCGC
GTACCACGGCACTCCATTCTTCTCCTTCGCGGCCGTGGTCCGCAGGGCAG
TGTCAATTTCGAACGTGAGGCGCCTGTCGTCCGTCGAACCGTCTGTGGCT
CCGAAAGCTTTGAAATCGTCCTCCAGCGATTTCAGCCAGTTTTGCGCCGG
CCGGCCTCTGCCTGGGTCCTGACCCCCCACGAGTTTCCCAAACATCAGTC
GCTTCGGGAGCCGCCTGTTGTCTTGTCTTGCCAGGGCCCCCGCGAACAGA
AGCCGCCTTTGCCGGATGATCGCCTCAGCACATTGGCTCCCGGTCTTCTA
TATAGGTCATGCGAAATGCCCAGCTGGGATCTACACAAACCGGTTTGATA
GAGAAGGATTTCTCGCCCGTGAGGTCTCTACCTTTCTTCTGCAGCGCATT
GTTTTTCTTTTGATCGCGAAAAGGGTTCGGCACTCACTCCTCCTTCCCTG
GTTGACAGACAACAGTCGTTTCGCTCGGATTTTTGGGCTGTCCAACCCGA
ATGCTCACAGCGAAACGTGTGAGATCTTCAATGAATACAATGCACCAGGA
ATAAGGACTACTTCTGTGGCAGTAGATAGAGCAGCACAGGGTTTGGATGA
GGCCTCCTGTCCAACGGCAGGAGGTCCGCACCCCATGGATATCCGTCGCG
CCGAAAGCGCGTTCCGCGCGGCGGCATGTCCTCGGAATTGATCCAGATGT
TCAAGAAACAACGCGCGAAAACAGTTTCTTATCACAATATTTCGGAAGTT
ATCCTAAACGTGTGGTAGGTAGGATGGTCTCCGTTCTACGCAGCCCCCTT
TGGGCTTTTCCGTAGTCTTCTGCATACAGCAGTAGTCTTGTTCCGTGATG
GTTGGCGAGGATGGCCAGCAGTGATCCTCAGGGGCAGTTATTCCCAGTCA
TTTGGGGGGCCCGGGGTTTGACATCGACCCGTGCCCAATCTTCTTCTATA
TACCACTGGACCCCAAGTTTGACTGTTGCACCTGGTAGTATTTTCGCCGT
TCCAGACCAATTGCAGATCACTTATACTTCCAAGTACTTGAAGTTATCTG
ATTGGGTTTGGATGAGGCCTCCTGTCCCGATCACAGGACCTTCCCCAGTG
GTTTGAAATTCGCAATCTCAAAATCTCCCTTCCCCCGCACTGACGCTTGG
AGAATATAAACCATCACACCCCCAGCGAAAAGGTAATGGCCGCAAAGTGT
CGCGCTGTCATTTGTGTGCTGGTTAGAATTGTGTCGAGTCAACTTGTGGT
TAAGTCCAAAGATTCTTCTGCTGCAACATTTTCTGAAAGGTGCATCATAG
AGGTGGCGTCCCGGAAATTGGATGTAGGTTTGGCGACACACGCACACACG
ACAGCAGTAGCAGTAGCTGTCGCCACCGACTGATAGAGGCGTCGCCGTGA
TGCCCCCCCCCGCCCCCCCGCCTTCGCTTCATTCAGAACCGGTGGGTAGG
CGACCAGTGACCTGTCATTTCCACCCCACCCAACACACCAGCACACTCGA
ACCGAGTTCCACCTCCGTCCGGAACTTCACTCAGGAGCAAAAACATCCAG
GGAAGTATCATATGCTACCAACACTAACGCGGTACAACATGCCCCCGACC
CCCCCCCCTCTGCTCGAACCAGGCGTTCGTTGCGACCCCAAGATTTCCGA
CGACAGGCAGCGGCGGGTGTGCACGTAGAAGCAGCAAAAGAGCGGATGCC
TTGTCAACGTCGATGGCAGCAGCAGCAGGTGGCCCGGTCCACGGGAAGTC
GATGCTCAGGTCTCGTGCGGTGGGCATCGGGTCCAGCGCACCTTCCACGG
TGATGCCGAACTCTGACCTGGAGGAGCTGGTGGAGACATCGGACGAGTGG
ATCGCAACAAGGACGGGGATCCGGAAGCGCCATCTCCTCAAGCAGGTGGT
GCTGTTGGTCGGTGGCGTTCGTGCTGTGCTTTTGCTGCTGCTGCTGCTTT
GCGCTGCTGCTGCTGCTTTGCGCTGCTGGTGCTTGTAGTGTTTTAAACGA
AAATAAACAAGCTCAGAGGAGGACCGCCCCAGGCCCAAGACAGGACGGTT
CACCCAAGACGGGACTGCTGTTCACCCCAGAAGATTTTGGGGCGTTTTGT
GATGCTAACAGCAGTGGGGCAGGGTTCATTTTGAGGCATGCCAGCCCAAA
CTAGATACACCAACAATGAACAGCAGTCGTAGGACCTGGTGCACGTCGTT
TTTATCGGGCTTCCATCACCGCCGTCACCGCCGCCGCCGCTGCTGCTGCT
GCTGCTGCTGCTCCTGGTCCTTCTGCCAGGGTAGTATTAACTGTGATAGA
CATGTCTGCCGTCGTGTTTATCTCCTCGTGTGCAGTGCGTGTTAAATGTC
TGTTCATGCGAACCTTCTTGTTGTCGAGCGCAGCGTCCGAATGGCACGCG
CTTAGACGTGCCCATTACTGCTCGATGTATTGTCGTCTTTGTTGTTTTCT
CTCTTCTGTCCATCGTGCACATGTCCGTCAGAACCTGAAAGTCGATTGTT
TTACGTATGTTTGCCTTGATTATTCTCCTACCCGCGTGCCATGACCCCTA
TCCTATCCCATGCTGCTATTGCCGTTTCTGTCTGCAGGGAGAAGGGGTGT
CCGAGCTAGCCATCACAGCCTCTAAAAATGCCTTGGAGCTGGCCGGGGTG
GACGGAGCGGATATTGACCTGGTACGACTTGGAGATACAGCTGTATCATA
CCAAGATAAATCCAGGGAGATACTGCTGTGTGATGGCGTGGTCTTGGTGG
TGGTGATGATTGTCGTTGGTGTGCTACTTGCGGTCCACCGGTGGTTGTCG
TGCGCGTTGACCCGGTATGGTAGCACTGCTGTTGGTGTTGGTGTTGGTGT
CGGTGGTTCTCACGTGGGTTTGTTTGTGGTGGCGGTGGCGTGTGCCGTCG
TTGTTAGTCTGACGACGATTCCCGTGTGATGCGTTACAATAGCGCTTAAA
TTCGTACCCCCTTGAAGGGAATTTCGCGACGTTATGATAGTCTGACGATT
CCTGTGTGACAGCAGTAAATTTCTCCCCTCTTTTGAAGGGAATTCGGCGA
CTTTTGCGCGAAAAAAATCGCTCTCGGGCTTCGCTCCGCTCTGCAGTCAA
TGTAGTTCTCCCCCTTCCCTTCCTGGCTCGTGTACAGCAAAAGTGATATT
CTACTGGCTGAAGTCCTTTCCCTTCCCTTCCCGACCTGCGCACCGCAAAA
GTGATTTTTTACTTTTTCCCTGGTTGTCTTGTGGATGCCTGTTTCAAATC
CCACCCGCCCCTCGACTCCCTCCCTCTCTCCCCTCCGCTGCATCATCACC
GTTTTCCGAACCAAAGGTGGTGATGGCGACATCGTCCCCTGACGACATGT
TCGGCGACGCCTGCGTGGTGGCGAACGCCGTGGGTGCCAAGGGTGCTGTC
GCTTTCGACCTCACGGCCGCGTGCTCCGGCTTCTTGTTCGGCCTCGTCAC
AGCGTCGCAGTTCCTCCACTCGGGAACGTACAAGTGAGAACACAAAAAAT
GATTGATTTATTCTTCCACGTAGTGATTACTCCGTCGACGGGGCAGTATG
GTTCATGACAGCAAATACGAGAAAAGGTTTTACTTGTCCGCCGACAGCAG
TAGCAGTGAAGACAAGATTGAACTGATTGGATCAATCGGCAGTCGGTAAA
TGGTATGTGTGGATTCTTTGCTGCTGCTGCTGCTGCGGCAAGCAAAACCG
GTTCTTGTTAACTCCCGGCGGCATCTATCATATTTGCATCTCCTTGTGGC
AGGAAATGCTTGGTGATCGGTGCGGACGCGCTCTCCCGGTGGGTAGACTG
GGACGACCGCAACTCGTGCATCCTGTTCGGAGACGGGGCGGGAGCGATGG
TCCTGGAGGCGGCGGAGGGGGACGACGGAGCGGGACTGTTGGGTGAGTGT
CTTGAGACAGAAAGACGCCTCCCGCACGGACGGTCGTTCAACATGCTTTT
GTGTCAAACGATCTTTGTCAGGGATCTCACAGAGTCGCGCGTCTCGTGGT
CTTGAAACGTGAACTGGTATGTATGGGGTGCAGACCGAACGTCGAACGAA
GGAAAATATGAGAAAGGTTAAAGATTCTAGAGGATCATACCCGGTAAAGT
GGGTAGCCTTGCCTTCTTGCCTTAAGTCCCTCTTCACTTTGGTTGCGTCG
TCGGGCGTGGTTTCGCCACCCCCATTTCAAAGCGCCTCGCAGCGTGGAAT
CGCCGAAACCCGTCCGCAAGGAGAAGCCCCCATCGACCAATTGCCGATGA
AGTTCAGTATGATAACCTGGTTCTTGTGTGCGCGTGCCGGTGCTTACGCG
GTTGCAGGGTTCTCGCTCCACAGCGACGGGGGTGGGCACAAGTCTCTGAC
GCTGTCCTACGATGGCGAGGAGCGAAATCTGGGGGACAATTACGCCGTCA
GCAAGGGGAAGTACGGCACGCTTGGGATGAACGGTCGAGAGGTGTACAAG
TTCGCGACGAGGGAGGTGAGAGAAACTGGAGGCAGGGGGGGGGGGGGGCT
TAGCGGGGGGTACTGTGTGTGCTGAATAGTGCGGAATTTCTTTGGACTCC
GGTATCCCTACAAAGATAGCAGGGGGGATGAGAAAAAGCAGGGGGGGGAG
TTGTGTCCCCTCATCTCGTACCCCTTTCGCGGATGATGGTGTCTTCGTGG
TTTTTGGCTGCAATATATGATGGATCCTTTTGAGGGGAGGAGAGTATGAA
AGGAAGGAGGTGGGCGTTCTTAGAGATGCTGCTTGTCTGAAAAGTGGCGC
CCGCATCGATCCACGCACCTCCTTCACCACCGTGAAGTTTATCTTGGTGT
GCGTCTCATGTTTTTCTCCCGAGGGCCAGGTTATTAAACTCTTCCCCGGA
TTGCCTCAGTGACTGGTGTACTGCCGCATACGATATGATACGATATGACG
ACCTTTCCGCAGGTGCCAAAAGTGCTGACGGAAGCTCTGGACAACGCGGG
CATGGAAGTGGGGGACGTCGACTGGCTTTTGCTGCACCAGGTGAGTGTCG
CCAGTGAGCGACACCGCTAGCCCGGGGAGTCTCGACGCCGCCGGGTGCCA
TACCAATGTCTCTCCCGGCGTTTTATCTCCCAAACGTTTTGTGTTAGCTT
TTTTTTTTCTGACCGCTCGTTTATTCCTACGTACGTACGTGCTCCGTGCA
TCTGACATGCCGGCAACAAAATTCATTCGCAGCAGTGGCACCATCCGCTG
CCTGCTGGAAAGCTGCTGTGCAAGAGTTAGAGCCGCAGTGTCGGCTCCTC
CCGTAGACCGAGGTAGACTTTGACATCGTCTATCTTCGCCTCCATTTCGT
TTTCCGTCCCGACTTGTCTGTTACGTTGGTCGTGGCGTGCAAACATCTGA
CAGGCCAACATTCGCATCATGGAGACCGTTGCGTCAAGGCTGGGCCTTCC
GATGGACAAGGTGCGGTTCCAGTATTTGTCGCTTCGTAGTCTCATTTTTC
GTCTTTTTGTTCATTTCACTACTGCTGTACCGAAGCAATTTTTGTTTTTT
CAGAGCGCCACTCCTTTCGTCATCCGTTGTTTGATATTATGCATTTGTTG
CACTAGTTGATGGTGCATGCAACGAATGTATTACAAGCACCCGCTCGCTC
CTGCGGACGAACAAACAGGTCACACGCAGCAGTCACAGCAGTTTCACGGG
AGTATCGTGTACTTCAAATGCGTATCATATGACAACGTTTAGCGCAGCCG
AGGTAAACCATTATTTTGCCATCCCTGAGCAACTCGGGAAGCGGTATCGA
TCGGTCACCCTCTCCCCCCCCGCCTGACCCTTTCATCACGCTATGATATT
CATTGAGAGATTCCGACCAGCACTGACATCCCGCGGATGCACCAAGTATT
ACACGCAGCGTGCGCCTGATGGATTTTGGGGTGCTCCCCCCCATGCCGTG
ATTTTTTCCAGGTGATCACAAACCTGGCGGAGTACGGCAACACGTCGGCA
GGGTCGATACCGCTGGCGCTGGATGAAGCAGTCCGCTCGGGGAAGGTGCG
GCAGGTTCAACATCCTTTCCCTTATCCCGCCCACTCTCTGACTGACGGCA
CTATCCCTGATGCTCTTGTCCATATCAATACCGAGAAACTTGTTGATTCA
AAAGTGGAGGACCAGTTGGGTTTGAGTGTCCTCGTATGACAGCCGATGAT
TTTTTTCTGTGATGTGGTATGAGATAATATTTTCAAGCTTGACTCGACGA
GTGAAATTTTAAAAATTTTGCCCGTCATCCGCACAATTTGATGGCTTTTG
ACTGAGCTTGAGTGTTGCACCCCGAATGACCCGAATGACTGACCATTCTC
GTCCTTTTGGTGGTACCCCGATTGTGGTGGTTGTTCTCGTCGGCTTGACA
GTTCGTCCCTTGCACACGAAGCGTGTGCACAAACATCGACTCTCTCCGAG
AAGCTCGTTTGTTTTTTGTGTTGCTTGTTTGTTTGTTTGTCGTTTGTTGT
TTTGCCACTTGTTCGGTCGTCGCCCGCGGGAGTGCTTTTTTTCCCTCATA
TTTACCGTGAGTTTGCCGCGCCTCCCGTCTTGCGCCACAAGGAAGCAAAG
GGTTCGCTCATCACAAAACATCTACTGAAGTAATTGGTTTTCTCTCGGTT
TTTTTTTGTTTCCATCACCGCCGCCGCCGCTGCAGGTGAAGTCAGGCGAC
GTGATCGCGTGCGCCGGGTTCGGCGCCGGTCTTAGCTGGGGAGCAGCGGT
CATTCGGTGGTCGGGTTGATCTTTTTCATCGACGTGCGATGGCAATGAGA
CGATGGTAGTGATCGACGATGATGGTGATCTTTCAAATGTTATTTACCCG
AACGAAGAGGCCAGCTTGTTTACAGCAGTGCATGTGTGACTCCTGTTTTG
TTTTGTTTTTTCAATTTTAGTTTCTGTCTCGAAAGGGCGCCATCACCGAC
CACTCCGTCTTAGATAGAAAAATGTTGTTTATTGTTCGTGGGCCGAGGGG
TATGGGCAAGGTCGGGTACTGTCGAAGCCAGGAAGTATCTGTCTATCGCT
AGAGCCACGGCATGGAGGTAGCTGTACACTTTTTTCACGCTAGGTTGTGC
GGAAAAGTTCTCATGGAAAGAAAGAGACGGTGCTTCTAGCTTCCTGCTAC
TGCTGTTTCTGCAAAAATGGGATGGTTGGTCGTTTCTTTTGTGTTGGATT
TCTGGCGGCAGTGCCACGAACGATCGAAACGGGAGAAGCTTAGACAAGAG
ACGCCGAGAGGTAGACTTGCTTGCGTGATGACATCGGCATTTCGCCCCGC
CGACCTAACGTAGCTAGATGAGCATTGCCTGTCTTGACAGCAGGAAAAAG
TGTCGGTTGGAACACTTGCTCACGTGTGCTCGCTCGTCTTCTTTTCATGA
AAAGAAATGGACTGTAGGCCGAGCTCGCTTTAGTTTCGAACAAAACAGAA
AGGAAGAAACAAAACGGGCAGCGGGCAATGAGCGGCTATGCACACCACGC
GCCCTCGTGTTTTTTTTTGTTTTTTCTTGTTGGGTTCAAGACACAACAAG
TTGTTTCGTGCGTCAGACACACAAAACAATGTTTGCACTTCTGCGCTGAA
CCCCATTGTCATCCACGCTTGTTGACGTTTTGGACGAGATAGGCGATGTC
AACTGTTGGCGCAGAGTAGAACGTGGCCGGTTTTCGAGTTGGTTTTGTCG
GCGTGCCTTTGAACGGTTTACGTACGTGTGCGCACTTTGCGGGCTGCAGC
ACCAGATACGATCATTGTAGTTTTGTCCTGCGACGTAGAGGGAGGGTTTT
GACATCAGTACTAGAAGGAGCTGGGTACCTTCAGACTTCAGAGGGTCGAA
AACACCAAAAGTTCAGTCTGCTTTCGTGTATTGCAGCCTGGGGTTAGTTG
TTCTTGCGAGGGATGAAAATACGCTGCTTATGCTTTCTCGTCTACACGCA
CCGTTCCGCGTACAAGATAAAAATCTCAATTCAGGTAGACATACAGGAGA
ACATGAAACCATTTAGCAGTAGTAGTGTGCGTCGAGTGTGTGGATTGAAT
CGAGCTATGTGTTTGTGGATGTCATGCCATTTATTCTGGGAGCGCCAGTC
TACACCCTTTCCGTATAAGCTGGGCGCACCGGCAGGGGTCACACAGGAGG
AAGGCCAGCACAGGAGGTTTTTTGTGTGACGACTTAAGTGGTGGATCGAA
TCTAGTTGGAGCGCAAATTCTGGTGCCGGCAGTTGTGGCGGGGTTTTCGG
ATTGTTGGTTGAGAGAATCATGATGGGGTTACAAAGTTTTCACTTCCGAC
GTGGTTCAACGTGCTGCGAAGAAAAATGGACATACTTGTGGTCCGACAAG
AAGAGCCAAATTCCTGGACAACTGCTAGACTGCGATGCAACGATAAAGTT
TTCTGTTGCACTGCTGTTTTCGTCATTTCAGCACACTTGCCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig139:440723..451264+

>mRNA_P-littoralis_Contig139.110.1 ID=mRNA_P-littoralis_Contig139.110.1|Name=mRNA_P-littoralis_Contig139.110.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1191bp|location=Sequence derived from alignment at P-littoralis_Contig139:440723..451264+ (Pylaiella littoralis U1_48)
ATGGCGCTGGGGACGGAGTCTATCGGGTTGCTGCTGAGATTGTTCTCGGT
CCTCGTTGTTGCAGAGGCGTTCGTTGCGACCCCAAGATTTCCGACGACAG
GCAGCGGCGGGTGTGCACGTAGAAGCAGCAAAAGAGCGGATGCCTTGTCA
ACGTCGATGGCAGCAGCAGCAGGTGGCCCGGTCCACGGGAAGTCGATGCT
CAGGTCTCGTGCGGTGGGCATCGGGTCCAGCGCACCTTCCACGGTGATGC
CGAACTCTGACCTGGAGGAGCTGGTGGAGACATCGGACGAGTGGATCGCA
ACAAGGACGGGGATCCGGAAGCGCCATCTCCTCAAGCAGGGAGAAGGGGT
GTCCGAGCTAGCCATCACAGCCTCTAAAAATGCCTTGGAGCTGGCCGGGG
TGGACGGAGCGGATATTGACCTGGTGGTGATGGCGACATCGTCCCCTGAC
GACATGTTCGGCGACGCCTGCGTGGTGGCGAACGCCGTGGGTGCCAAGGG
TGCTGTCGCTTTCGACCTCACGGCCGCGTGCTCCGGCTTCTTGTTCGGCC
TCGTCACAGCGTCGCAGTTCCTCCACTCGGGAACGTACAAGAAATGCTTG
GTGATCGGTGCGGACGCGCTCTCCCGGTGGGTAGACTGGGACGACCGCAA
CTCGTGCATCCTGTTCGGAGACGGGGCGGGAGCGATGGTCCTGGAGGCGG
CGGAGGGGGACGACGGAGCGGGACTGTTGGGGTTCTCGCTCCACAGCGAC
GGGGGTGGGCACAAGTCTCTGACGCTGTCCTACGATGGCGAGGAGCGAAA
TCTGGGGGACAATTACGCCGTCAGCAAGGGGAAGTACGGCACGCTTGGGA
TGAACGGTCGAGAGGTGTACAAGTTCGCGACGAGGGAGGTGCCAAAAGTG
CTGACGGAAGCTCTGGACAACGCGGGCATGGAAGTGGGGGACGTCGACTG
GCTTTTGCTGCACCAGGCCAACATTCGCATCATGGAGACCGTTGCGTCAA
GGCTGGGCCTTCCGATGGACAAGGTGATCACAAACCTGGCGGAGTACGGC
AACACGTCGGCAGGGTCGATACCGCTGGCGCTGGATGAAGCAGTCCGCTC
GGGGAAGGTGAAGTCAGGCGACGTGATCGCGTGCGCCGGGTTCGGCGCCG
GTCTTAGCTGGGGAGCAGCGGTCATTCGGTGGTCGGGTTGA
back to top