mRNA_P-littoralis_Contig139.98.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig139.98.1
Unique NamemRNA_P-littoralis_Contig139.98.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: D8LRQ0_ECTSI (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRQ0_ECTSI)

HSP 1 Score: 353 bits (907), Expect = 6.790e-120
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 3 
Query:   72 MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            MV+FVDKQVDELKKLW NKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFL+NGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDG+ISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA
Sbjct:    1 MVDFVDKQVDELKKLWHNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLHNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGSISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 183
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A835Z4U9_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A835Z4U9_9STRA)

HSP 1 Score: 319 bits (818), Expect = 2.110e-106
Identity = 156/182 (85.71%), Postives = 171/182 (93.96%), Query Frame = 3 
Query:   75 VEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            ++ VDKQV ELKKLW NKRQLAFQGLNLAMIVLSALMIWKSLMVVT+SESPVVVVLSGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHR+M VHEKPDGT+ VLTKGD+N+V+DRGLY PGQ+WL REDILGRARG LRYVGMVTI+LNDYP LKYVLVG+MGLFVLTN+EA
Sbjct:    1 MDIVDKQVVELKKLWKNKRQLAFQGLNLAMIVLSALMIWKSLMVVTRSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRIMKVHEKPDGTVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRARGALRYVGMVTIVLNDYPALKYVLVGIMGLFVLTNKEA 182
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A6V1QND9_HETAK (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QND9_HETAK)

HSP 1 Score: 302 bits (774), Expect = 1.020e-99
Identity = 149/183 (81.42%), Postives = 166/183 (90.71%), Query Frame = 3 
Query:   72 MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            M+E +++Q+DELKKLW NKR LAFQ LNLAMIV SALMIWKSLMV T+SESPVVVVLSGSMEPAFQRGDILFL N  +P+RAGEVVVFKIKDREIPIVHRVM VHEK DG +  LTKGD+N+V+DRGLY PGQ+WL REDILGRARGTLRYVGMVTIILNDYP LKYVLVG+MGLFVLT++E+
Sbjct:    1 MMELIEQQLDELKKLWKNKRALAFQALNLAMIVFSALMIWKSLMVWTQSESPVVVVLSGSMEPAFQRGDILFLTNHQDPIRAGEVVVFKIKDREIPIVHRVMKVHEKGDGAVEALTKGDNNRVDDRGLYAPGQLWLGREDILGRARGTLRYVGMVTIILNDYPVLKYVLVGIMGLFVLTSKES 183
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A7S0SWE0_9STRA (Signal peptidase I n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SWE0_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.130e-98
Identity = 147/182 (80.77%), Postives = 162/182 (89.01%), Query Frame = 3 
Query:   75 VEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            +  V  Q  ELKKLW NKRQL+FQGLNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRVM VHEK DG I VLTKGD+N+V+DRGLY PGQ WL REDILGRARGTLRY+GMVTIILNDYP LKYVL+G+MGLFVLTN+E+
Sbjct:    1 MNIVKNQAFELKKLWKNKRQLSFQGLNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVMKVHEKADGKIEVLTKGDNNRVDDRGLYAPGQQWLQREDILGRARGTLRYLGMVTIILNDYPILKYVLIGVMGLFVLTNKES 182
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A7S3M735_9STRA (Signal peptidase I n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M735_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.580e-98
Identity = 145/182 (79.67%), Postives = 164/182 (90.11%), Query Frame = 3 
Query:   75 VEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            +E V  QV E+KKLW NKRQL  Q LNLAMIV SALMIWK LMVVTKSESPVVVVLSGSMEPAFQRGDILFL N D+P+RAGE+VVFKIKDR+IPIVHRVM VHEK DG++ VLTKGD+N+V+DRGLY PGQ+WL REDILGRA+GTLRY+GMVTIILNDYP LKYVL+G+MG+FVLTN+E+
Sbjct:    1 METVKNQVVEIKKLWKNKRQLTLQALNLAMIVFSALMIWKGLMVVTKSESPVVVVLSGSMEPAFQRGDILFLTNQDDPIRAGEIVVFKIKDRDIPIVHRVMKVHEKEDGSVEVLTKGDNNRVDDRGLYAPGQLWLQREDILGRAKGTLRYLGMVTIILNDYPVLKYVLIGIMGIFVLTNKES 182
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A7S1U989_9STRA (Signal peptidase complex catalytic subunit SEC11C n=2 Tax=Pinguiochrysidaceae TaxID=1004268 RepID=A0A7S1U989_9STRA)

HSP 1 Score: 298 bits (763), Expect = 4.740e-98
Identity = 147/183 (80.33%), Postives = 165/183 (90.16%), Query Frame = 3 
Query:   72 MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            M E V  QV ELKKLW+NKRQL FQ LNLAMIV SALMIWKSLMV+TKSESPVVVVLSGSMEPAFQRGDILFL+N D P+R GE+VVFKIKDR+IPIVHRV  VHEKPDG + +LTKGD+N+V+DRGLY PGQ+WL+REDILGRA GTLRYVGMVTIILND+P LKY+LVG+MGLFVLTN+E+
Sbjct:    1 MWEIVQMQVFELKKLWANKRQLLFQSLNLAMIVFSALMIWKSLMVLTKSESPVVVVLSGSMEPAFQRGDILFLSNHDSPIRVGEIVVFKIKDRDIPIVHRVTKVHEKPDGKVELLTKGDNNRVDDRGLYAPGQLWLNREDILGRAVGTLRYVGMVTIILNDFPALKYLLVGIMGLFVLTNKES 183
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A7S2RVP6_9STRA (Signal peptidase complex catalytic subunit SEC11C n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RVP6_9STRA)

HSP 1 Score: 290 bits (741), Expect = 9.500e-95
Identity = 142/181 (78.45%), Postives = 159/181 (87.85%), Query Frame = 3 
Query:   75 VEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 617
            +E +D Q+ ELKKLW NKRQ  FQ LNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFLNN D+P+R GEVVVFKIKDR+IPIVHRV+ VHEKPDG + +LTKGD+N+V+DRGLY  GQ ++ REDILGRA GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E
Sbjct:    1 MEMIDAQISELKKLWRNKRQFLFQALNLAMIVFSALMIWKGLMFITKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEVVVFKIKDRDIPIVHRVLKVHEKPDGRVELLTKGDNNRVDDRGLYALGQQFIGREDILGRAVGTLRYVGMVTIILNDYPALKYVLVAVMGLFVLTNKE 181
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: F0YAE9_AURAN (Signal peptidase I n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0YAE9_AURAN)

HSP 1 Score: 288 bits (736), Expect = 8.490e-94
Identity = 146/192 (76.04%), Postives = 161/192 (83.85%), Query Frame = 3 
Query:   75 VEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRAR-----------GTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 617
            +E VD+Q+ ELKKLW NKR L  QGLNLAMIV SALMIWK LM VTKSESPVVVVLSGSMEPAFQRGDILFLNN D P+R GEVVVFKIKDR+IPIVHRVM VHEK DG + +LTKGD+N+V+DRGLY PGQ+WL+RED+LGRA            GTLRYVGMVTIILNDYP LKYVLV +MGLFVLTN+E
Sbjct:    1 MEIVDQQIFELKKLWKNKRLLLHQGLNLAMIVFSALMIWKGLMFVTKSESPVVVVLSGSMEPAFQRGDILFLNNQDNPIRVGEVVVFKIKDRDIPIVHRVMKVHEKADGAVELLTKGDNNRVDDRGLYAPGQLWLAREDVLGRAIRGGNKMIQGAIGTLRYVGMVTIILNDYPALKYVLVSIMGLFVLTNKE 192
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: W7TFR1_9STRA (Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TFR1_9STRA)

HSP 1 Score: 286 bits (731), Expect = 3.320e-93
Identity = 140/183 (76.50%), Postives = 159/183 (86.89%), Query Frame = 3 
Query:   72 MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA 620
            M E V  Q+ ELKKLW + R L  Q LNLAMIV SALMIWK LM +TKSESPVVVVLSGSMEPAFQRGDILFLNN D+P+R GE+VVFKIKDR+IPIVHRV+ VH+K DG + +LTKGD+N+V DRGLY PGQ+WL+REDILGRA GTLRY+GMVTIILNDYP LKYVLVG+MGLFVLTN+E+
Sbjct:    1 MEEIVQGQLSELKKLWRSPRMLLSQSLNLAMIVFSALMIWKGLMFLTKSESPVVVVLSGSMEPAFQRGDILFLNNQDDPIRVGEIVVFKIKDRDIPIVHRVLEVHQKEDGKVELLTKGDNNRVGDRGLYAPGQLWLNREDILGRAAGTLRYLGMVTIILNDYPMLKYVLVGIMGLFVLTNKES 183
[Close]
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Match: A0A6U5HKR9_9STRA (Signal peptidase I n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HKR9_9STRA)

HSP 1 Score: 280 bits (716), Expect = 6.190e-91
Identity = 137/182 (75.27%), Postives = 157/182 (86.26%), Query Frame = 3 
Query:   72 MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSESPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHRVMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLRYVGMVTIILNDYPPLKYVLVGLMGLFVLTNRE 617
            M + +DKQ+ ELKKLW NKRQLAFQ LNLAMIV SALMIWK LM VTKSESPVVVVLSGSMEPAFQRGDILFL+N +  +  G+VVVFKI+DR+IPIVHR++  H K DG + +LTKGD+N+V+DRGLY PGQ+WL REDILGRA G LRYVGMVTI LNDYP LKYVLVG+MGLFVLT++E
Sbjct:    1 MKDIIDKQIVELKKLWLNKRQLAFQALNLAMIVFSALMIWKGLMCVTKSESPVVVVLSGSMEPAFQRGDILFLDNSNPEVAVGDVVVFKIRDRDIPIVHRILKAHRKADGKVELLTKGDNNRVDDRGLYAPGQLWLEREDILGRAVGCLRYVGMVTIALNDYPVLKYVLVGMMGLFVLTSKE 182
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.98.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRQ0_ECTSI6.790e-12097.81Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A835Z4U9_9STRA2.110e-10685.71Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A6V1QND9_HETAK1.020e-9981.42Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S0SWE0_9STRA1.130e-9880.77Signal peptidase I n=1 Tax=Chromulina nebulosa Tax... [more]
A0A7S3M735_9STRA4.580e-9879.67Signal peptidase I n=1 Tax=Spumella elongata TaxID... [more]
A0A7S1U989_9STRA4.740e-9880.33Signal peptidase complex catalytic subunit SEC11C ... [more]
A0A7S2RVP6_9STRA9.500e-9578.45Signal peptidase complex catalytic subunit SEC11C ... [more]
F0YAE9_AURAN8.490e-9476.04Signal peptidase I n=3 Tax=Pelagomonadales TaxID=5... [more]
W7TFR1_9STRA3.320e-9376.50Signal peptidase I n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A6U5HKR9_9STRA6.190e-9175.27Signal peptidase I n=1 Tax=Corethron hystrix TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:404316..410021 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRQ0
Preferred nameSEC11C
PFAMsPeptidase_S24
Model size1153
Max annot lvl2759|Eukaryota
KEGG koko:K10686,ko:K13280
KEGG Pathwayko03060,ko04120,map03060,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005787,GO:0005789,GO:0006465,GO:0006508,GO:0006518,GO:0006605,GO:0006807,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008152,GO:0008233,GO:0009987,GO:0010467,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016485,GO:0016787,GO:0019538,GO:0031090,GO:0031984,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0042175,GO:0042886,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051604,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0072594,GO:0072599,GO:0098796,GO:0098827,GO:0140096,GO:1901564,GO:1902494,GO:1905368
Exons5
Evalue6.57e-123
EggNOG OGsCOG0681@1|root,KOG3342@2759|Eukaryota
Ec32 ortholog descriptionSec11 homolog, catalytic subunit of the Signal Peptidase Complex
Ec32 orthologEc-12_000620.1
EC3.4.21.89,6.2.1.45
Descriptionsignal peptide processing
Cds size552
COG categoryU
BRITEko00000,ko00001,ko01000,ko01002,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.98.1prot_P-littoralis_Contig139.98.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig139 404846..409950 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789642.9813895-UTR-P-littoralis_Contig139:404315..4048451680789642.9813895-UTR-P-littoralis_Contig139:404315..404845Pylaiella littoralis U1_48UTRP-littoralis_Contig139 404316..404845 -
1680789643.049689-UTR-P-littoralis_Contig139:409950..4100211680789643.049689-UTR-P-littoralis_Contig139:409950..410021Pylaiella littoralis U1_48UTRP-littoralis_Contig139 409951..410021 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789642.9928622-CDS-P-littoralis_Contig139:404845..4049001680789642.9928622-CDS-P-littoralis_Contig139:404845..404900Pylaiella littoralis U1_48CDSP-littoralis_Contig139 404846..404900 -
1680789643.0010312-CDS-P-littoralis_Contig139:405363..4054941680789643.0010312-CDS-P-littoralis_Contig139:405363..405494Pylaiella littoralis U1_48CDSP-littoralis_Contig139 405364..405494 -
1680789643.0090475-CDS-P-littoralis_Contig139:407143..4071891680789643.0090475-CDS-P-littoralis_Contig139:407143..407189Pylaiella littoralis U1_48CDSP-littoralis_Contig139 407144..407189 -
1680789643.0196326-CDS-P-littoralis_Contig139:407832..4079791680789643.0196326-CDS-P-littoralis_Contig139:407832..407979Pylaiella littoralis U1_48CDSP-littoralis_Contig139 407833..407979 -
1680789643.0361435-CDS-P-littoralis_Contig139:409777..4099501680789643.0361435-CDS-P-littoralis_Contig139:409777..409950Pylaiella littoralis U1_48CDSP-littoralis_Contig139 409778..409950 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig139.98.1

>prot_P-littoralis_Contig139.98.1 ID=prot_P-littoralis_Contig139.98.1|Name=mRNA_P-littoralis_Contig139.98.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=184bp
MVEFVDKQVDELKKLWSNKRQLAFQGLNLAMIVLSALMIWKSLMVVTKSE
SPVVVVLSGSMEPAFQRGDILFLNNGDEPLRAGEVVVFKIKDREIPIVHR
VMNVHEKPDGTISVLTKGDSNKVNDRGLYVPGQMWLSREDILGRARGTLR
YVGMVTIILNDYPPLKYVLVGLMGLFVLTNREA*
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mRNA from alignment at P-littoralis_Contig139:404316..410021-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig139.98.1 ID=mRNA_P-littoralis_Contig139.98.1|Name=mRNA_P-littoralis_Contig139.98.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5706bp|location=Sequence derived from alignment at P-littoralis_Contig139:404316..410021- (Pylaiella littoralis U1_48)
GAGATAGAAAGCTGGGCGGGACAGAGAGATCGGCAGCAACGACTGCATTA
GGGCTGGTTGGGCGGTACAGGATGGTAGAATTTGTGGATAAGCAGGTGGA
CGAGCTGAAGAAGCTATGGAGCAACAAGCGGCAGCTGGCGTTCCAAGGGC
TGAACCTGGCCATGATCGTGCTCTCCGCTCTCATGATCTGGAAGTCGCTC
ATGGTGGTCACCAAGTCGGAGAGTCCCGTTGTGGTTGTCCTCAGGTGAAT
ACCGCGGGGCGACATACTTACAGATGTTCATGTGCAGAGATTGAATTTGG
ACGTGATATCATACCGGATCATATCAACTCGTATTTACATACTTGTACTA
TGTTCGTATCGATACAAGCCTACTGCCGTAACCGGCAGCCGTAGTGTTTC
GGTTGCGACGTGATGTTGCGTGGGCGAGAACGAGGAACGGGCGCTCTCTC
GCGGTCTATGAAACAGCAGTAGCGCCCGGAAAACGAGTGGTGCGGCCCCG
GCAGGTGACATCAAGCTTGCATAATCGCGCAACAGCACAGCGGTTATTAT
TCAGCTGGTATTGTTGGGTTTCGTACACAACGCAAACGAGAGATACACGA
AGTAAATCCCTGTCTCGTGTCGTTCAGCAAGGAGCGGACGAGAGCCGACG
CCAGCTTTTACCCGACGGACGACAGACGGGGGCGTTTTTAGAAGGCGGCG
GGGGCAATCGAATCCACGACGATGTGTTCTCAGCTGGCGTCGGCACCCAG
TTACAATAAATTATTATACAGGAACACACTTCAATAAGGCACATAGAAAT
ATGTTGGTGTTGTACTGCTGTGTCAAAGTGTTCGGGTTCGGGGTGTCTAC
GGGAGGAGTTTGCGGTACTGCTACTGCTGTACCGGTATGACAAGACTGAT
CGAGGCAGGTGGGTGTGAATACGCGTATGATAGTCAGCGGCAGTGCCTAT
TTGGCCGGACGGGTTGAGATTTGGCTCCCCGTGAGGGTGGCCCGAGGCAT
CACTCGGAGGGTCTCACATCCGGGTTTTGTGTGTTGACGGGGCGTAGCGT
TTTTTTGTGTTTTCCGTTGTTTTTGTGGCAACCCCAAATTTTTCGGTGAC
TTTTCACTCTAATCCTCCAGACTCCAGACGCTCCACGTGTAAGTCCCCGA
TGCACTGGGAACGTGCACCCTTGCAAGAAGGCTCCGGCTTGCGCATGAGC
CGTATGGACGATTATATAAGCGCACAACATTTCACCTCCTACTGGTATGT
ACGTGCAGTGCATTTCATTTTCGCCCAGAAGCGGGTGTTTGTTGTGTCGC
GGTATGGGGTGTGCCCCCCGTTTGTGCTGTCCTGGTGCACCACTCCAGGC
GCCCCATATCTCTTTTCAGTCGTACTTTTCCCTCTTCTACGAGACCTTAC
CCTCTCTCATGAGACCTTTGTCGACTCTCACTGGGCCTTCTGTCCTATCT
AGCGTATACGACGCTACCCGTGCATCCAATCTTGTTGCTCCAGAGAGGAC
ACCTGAATCCACAGGAGAAAGGGATGGCACCCTGTGATAATATCATCGGT
GCCTGCCCTTATCTGGCGTCGACTTGCAAACGTTTCCAACAAACCCACCG
CTCTCTCCACGCTCCATTATTTGTATCATCTGTTGATCCTCCCTCCTGGG
TGAAACCGATACTGCAGTGCTTGGTCGGCGTTGGCACAACACGGAACAAC
CATCAGGCCCACCTACCCTTTTCGGTGCTTCGTCAGCTGCTCTCCGTTGG
TCTCCGCCCACCAACCAGTACCTGCTGCGTCTCTCTTTTGTCGACTCTTG
CTGTACTTCTTGCTCGGTGCCAGCCCCTTGCTTGATGTGCCATTGCCATT
CCCTGTCACCACGCCCTGCCCAGTCCGCTTGCCTTCGAAAAAATAATTAA
GTGGTGTACGACACAAGTAACAGTCACAGAGTTTGTATTCCAAATGCACC
TTCGTAAGATCCAGAACGTGAAAGGCAGGCAGGTGCCGCGTACTGAACAT
GCCCCCCCCGTCCCTTCTCCGTGGAATGAATTGATCCTTCAGTGGTTCGA
TGGAGCCGGCGTTTCAGCGCGGAGACATTTTGTTCCTCAACAACGGCGAC
GAGCCGCTCCGAGCAGGCGAGGTGGTGGTCTTCAAGATTAAAGACAGGGA
GATTCCCATCGTGCACAGGGTCATGAACGTCCACGAAAAGTGAGTAGCAC
GAGCGGCAGCGGGTAGTCTTTCTAGCTAGGGCTCGTCGCATGCGCAACGC
GTCATTTCAGCCTTTGACTCAATTACCTTTGAACCGGGACCTTTTTCTTC
TCGTGCCCAGCGGGTTAAACGCCCAACAAGGAATATCACGCCTAACTCTT
GTGGGCGGTAGGAACCGTGTAGCGCCGCGGCTTGGCATGCTGTGCTATCG
TTGTCGTTGTTTCGTAAGTGCCTTTTTGAGCATAGCGCACACTGCTGTGC
TGAACCGCCCGTAGATGTTATGTAATGTAGAAAGTACGGCCAATCGGTTT
GGTATCAACATGTTGGCCTACCGCAAAAGGCTGAAAGTAGCGCCGTGTTC
TGAAATGCCAGCCGTTTCACAAGGGATTTCTCTCGTACAAGGTGCGGTGT
TTTCTGCGGCACGAAACCGTGTATTCCGTGTCCGGGATTGATAGATCGAT
GATAAACGGAAAGAGAGGCTAGCGCCAGCGTGTCGAAAGCAGATGCCCCA
ACTTTCATCAACGTGCTACCCCCTTCGTAACTCGCTCATGTCTGTGCCAC
CGCCACCCTGCCACGGTGTGCGTTGTTGCGCCCTCGAATCTGCTATCTCG
TCATCGCATGGTATGTCCGAACGCCACGCCAGGCCGGACGGAACGATATC
TGTGCTGACCAAGGGAGATAGCAACAAGGTGAGGAGAGTAGACCTGGCCT
CACTTGTGTGTGAGTGTGTGTGTGTGTCATTTCTAATGTTTTTGTAATTT
TGGCGTGTTTGTCTCTGGCCACAGTCGGCTTTTTCTAGCCCTCTTCTCGA
CGAGGAACGCAGGCGGCACACCGGTGCACTATCTCGCACGCCTTGGTCTT
GCCAGGCAGCCGTGGCCCGTGTGCTGGACGCCTAAAGTCGCCGGGACTGG
CTCTCTCCACCAAGGAGAAGCATCCTGAGCACAGAAAAACTCGCGACGAC
TCAAGTCGAAACCCATAAAAATAGCCGATGGTGTGGCGCCGGGTTTCGTT
TTGTGGAACACATATTTATGTACATGCACCCACCACACACTCACGAACAA
CATGCAACTAACATCAGCGCATTCAACATTGGTAGCGGTGAAGACAACAG
CAGGGTAAAGCACTAACAGCAACGACAGCAGCACCGCCAGTACACGCAGA
TGTCCTCTTCGGAGCAGCGCGAGGCACAGCACGCTCGCTTTCACAGAGAC
ATGAGAAGCCACAACACACGAAGAAGTCGAAGAAATGCAGATATCATTTC
CAAAACACTAACTTTCAGGTCTGCCATGCACAGCCAGTGTAGTGTGGGAT
GCGTGCGGAGCGATACTACACCAGATTGTCAGCGACGGGCAGGCCGCAAT
ACACAAACCCATTGAAGAGGAAGTGACAAAATGTGCAACACGGTGACTTT
TGACACATATCGAAAAGACAACAACGACTTCCACCGGCCGGAGCCGAAGG
CAAGGCCAGAAAATACACACCTAAGGAACGTGATCGGAAAATCCCGAGCA
CCGGAAATGTTGGAATTTGCGATTTGCGAACTGTATTGTGGAAATATCAA
AATTGGGATTTCGACGAAACGATGATCACGTTATGACTCCATCTCTGCTG
GAGTTGCTTTTGAAGGCTTTAAAATTGCTGCTGGACATCCAGAGCAACAA
CACCAAACTGCTGTCGCGGAATACCTTCAACTCATTGCAACCCCAACTGC
GTTGTACGCCGCACACGCCGAGAGAACAGCCGCCGAATGGTTGTATAACA
TCAACATCCGAGCTAAAACCCGTCGGCCAACCATATCCACCTTCGCCTTC
CGATATTACGTGCAGCTTTTCAAACGACCATCACCACCACCAAACGTTGA
GATACAACAACCTCGGAAGGCTTTCGGCACCTCATCTTGCGTCACCCCCG
GGAAACACGAACCAACTTCCCGAAGGGGACCCTTGTTTTTCCCCATCTTT
TTCTCGATCGGCGTCGTTTTTGCGCACAAAGCGATTCCAAATATGTTGAC
CAAGAAGGACCCAGAGAGACGCGAGTGTCGATCGCTTGGGGTGCTTTCGG
AGTTCCGAAGTGCAACGGGTGCATAGCAGTCCCCTCGCGTGCTTGCAGTC
TTTTCTGTCTCTCGCTTGTTGGAAAGGTTACCGTTGCCCCCTAGTCTCTC
GCCCGCGACCTTATTCCACCTTGGTGCACATCAGCAGCAGCAGCAGCAGC
GGCAAGCAGCAGCAGCAATTCAACAGCTTTCCGATTTATTCGATACGAAG
TACTGTCGACGATGCTGCTGCTACTGCTCGTCCTGGAGCGATACTGGCTG
ACTTGGCCACTGTTGCTGCTACTGCAGGTAAACGACCGAGGGTTGTATGT
ACCGGGGCAGATGTGGCTGAGTCGGGAAGACATTCTGGGCAGAGCACGGG
GCACACTTCGCTACGTGGGCATGGTCACCATCATCCTCAACGACTATCCA
CCGCTAAAGTGAGGAAAACAACGTCGGATTTGGTATGCGAAGATATTCCG
TGGGTAGCTTCAGCTTGTCGTCACACTGCCATTGATGCGTTGTTGATGCG
ACACATCTTTCGTTCTGCCGAAGACGTCGTGTTCGTTTCTATTTTCTCAA
TATTGCCGCGCCAAGCAGTAGCTTGTAGTTGTGCAGCAGAGGCGTTGAAA
CAGTAGTTACTACCTCGTTGTTTATTTTGTGTTGTGCCTCACAGTATGTT
GCTGCGATCGGGGGAATATGCAGGAATAGTTTCTGTTTTTTTTTGCTTCA
ACATGTCCTATTTTTTTTGTATGCTTTATGCACTTCTCTTCCTTACCAAA
GCCTACCTCTCCACAGCGTGAGCAGAAGCTTTTTTCATTCCCCACGTGGT
ACGTGATCACGATCTACGTTGAACTGCTCTGACAATGAAAGCCTCACGCT
TGCTGTATTTTTTCTCCTCAGGTACGTGCTGGTTGGGCTAATGGGGCTTT
TCGTGCTGACCAATCGAGAAGCATGATGACCGGCCTGCGCGTGGCTGCGT
TCCCCTTGTGTGCGCTAAAGAGGAGGCGAAATAAAGATGGGGTGAAGGTG
GTGGACATGGGGCCATTCCGACTGGGTACAGTATCATGCGGCGGCGATAC
CGACGGGGTTCGCACGGTTGTGACACAGTTTGGGTCCCAACAGATAGTAC
GCGACCCGGCGCGGGTCGGGCCCAGCAGTTGGCCCCATTCATTACTGGGG
AGATGATTTGCCCTGAGTGATCACTGCTGGCTCTCTACCCTAAAGCACAC
GGAAAAGGAGTGTAGGATTTCGGGAAAGTCAAAAGGAGACGTGGAAAACG
GCAACGGATATTTGATATTTGTGCCCACTGCTGTAGAGCTCAAGTTTTTT
CGTTGTTGCGGGACCCTGGAACACGCGCCTGAAGATTTTACCACTGGTAT
TTTTATGGATGCATGTGTACGCAGAGCTGGGCTCTGTACAGGAGGATCAC
GACAGCCAGGCATCGCGCAAGGATTGATTTTGTTGTTGTTCAGCAGCAGT
TCGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig139:404316..410021-

>mRNA_P-littoralis_Contig139.98.1 ID=mRNA_P-littoralis_Contig139.98.1|Name=mRNA_P-littoralis_Contig139.98.1|organism=Pylaiella littoralis U1_48|type=CDS|length=552bp|location=Sequence derived from alignment at P-littoralis_Contig139:404316..410021- (Pylaiella littoralis U1_48)
ATGGTAGAATTTGTGGATAAGCAGGTGGACGAGCTGAAGAAGCTATGGAG
CAACAAGCGGCAGCTGGCGTTCCAAGGGCTGAACCTGGCCATGATCGTGC
TCTCCGCTCTCATGATCTGGAAGTCGCTCATGGTGGTCACCAAGTCGGAG
AGTCCCGTTGTGGTTGTCCTCAGTGGTTCGATGGAGCCGGCGTTTCAGCG
CGGAGACATTTTGTTCCTCAACAACGGCGACGAGCCGCTCCGAGCAGGCG
AGGTGGTGGTCTTCAAGATTAAAGACAGGGAGATTCCCATCGTGCACAGG
GTCATGAACGTCCACGAAAAGCCGGACGGAACGATATCTGTGCTGACCAA
GGGAGATAGCAACAAGGTAAACGACCGAGGGTTGTATGTACCGGGGCAGA
TGTGGCTGAGTCGGGAAGACATTCTGGGCAGAGCACGGGGCACACTTCGC
TACGTGGGCATGGTCACCATCATCCTCAACGACTATCCACCGCTAAAGTA
CGTGCTGGTTGGGCTAATGGGGCTTTTCGTGCTGACCAATCGAGAAGCAT
GA
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