prot_P-littoralis_Contig139.90.5 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig139.90.5
Unique Nameprot_P-littoralis_Contig139.90.5
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length547
Homology
BLAST of mRNA_P-littoralis_Contig139.90.5 vs. uniprot
Match: A0A6H5JGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP4_9PHAE)

HSP 1 Score: 250 bits (638), Expect = 2.910e-68
Identity = 244/545 (44.77%), Postives = 279/545 (51.19%), Query Frame = 0
Query:    5 FAVHQLVKVAQRQWPGVNKEGGDARVLKMNEDGTVAVAYIIGKRSEASVHVKYVQPTEETDRRAGRRGGANSRSSTRSLRLQRSVKAPKQFDEAVERVATVAAGPELPELVPGTPKFVLQQVKEMERLLCRIEKEDSYDMFRTARDPIDKLKGTGEHQEDHENGGGAGDSHSSCVLLAPGRGGDSSLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAAFRAAATPRINLPQIRERFVSGHYVPAPGSYLILSEE--PAYGEASTTAATSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALFSSPARDGPPSPPSEKTPPVKAENKQKDATL------------------LALTRDSGRLGEEATLTFEYEPLLDWAGLRADVAGMASRMLKGAEDWQAEKK 529
            F V Q V VAQRQWPGVNKEGG  RV K+N DGTVAVAYIIG RSEA V +KYV+  E+ +  AG  GG  SRS+TRSLR  R+VKAPKQFDE V R++T A GPELPEL  GTPKF+ QQVK+ME+L+ RIEKEDSY++FRT  DPI+KLKG  E + D + GG A  S  +CV    GR   SS                 XXXXXXXX                      XXXXXXXXXXX                                                                 ES       TP INLPQIRERFV G YVPAPGSYL+ S+E  PA GEAS   A                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                + ++ A +    PP+  TP   A  K     L                  L LTRDSGRLG  A LTF+YEPLLDWAGLRAD+AGM  R+++ AEDW++E++
Sbjct:    2 FEVGQDVVVAQRQWPGVNKEGGPGRVSKVNSDGTVAVAYIIGNRSEARVPLKYVRLLEQPEGLAGSTGGVQSRSATRSLRGARAVKAPKQFDETVARMSTSATGPELPELAAGTPKFIHQQVKDMEKLISRIEKEDSYEIFRTELDPIEKLKGMEEAEGDEQTGGDADRSGFACVAAGRGRSAASSXX---------------XXXXXXXXEGAPQSSDKKRAGSPVRGDGGSXXXXXXXXXXXRPRKGSSVAVNVGEPAAAVAGADVPTPPRRSPSTALEDAMDVDSEGKAGGEGDSAATGRNGVLLKESQHPVKPKTPPINLPQIRERFVRGCYVPAPGSYLVQSQEAVPARGEASGDQAP--------LLTSGDDGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGAPKGPRNRPSSSRSGSSSPPLPSQSPKEVATAKAAE----PPAPATPSGTAVTKTASKALKPTGRASSPSLQTRPTPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRIVQWAEDWKSERE 519          
BLAST of mRNA_P-littoralis_Contig139.90.5 vs. uniprot
Match: D8LRP6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP6_ECTSI)

HSP 1 Score: 241 bits (616), Expect = 2.280e-65
Identity = 261/536 (48.69%), Postives = 297/536 (55.41%), Query Frame = 0
Query:    1 MVTTFAVHQLVKVAQRQWPGVNKEGGDARVLKMNEDGTVAVAYIIGKRSEASVHVKYVQPTEETDRRAGRRGGANSRSSTRSLRLQRSVKAPKQFDEAVERVATVAAGPELPELVPGTPKFVLQQVKEMERLLCRIEKEDSYDMFRTARDPIDKLKGTGEHQEDHENGGGAGDSHSSCVLLAPGRGGDSSLDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESAAFRAAATPRINLPQIRERFVSGHYVPAPGSYLILSEE--PAYGEASTTAA---TSPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------SALFSSPARDGPPSPPSEKTPPVKAENKQKDATLLALTRDSGRLGEEATLTFEYEPLLDWAGLRADVAGMASRMLKGAED 523
            MVT F V Q V VAQRQWPGVNKEGG  RV K+N DGT+AVAYIIG RSEA V +KYV+  E+ +   G  GG  SRS+TRSLR  R+VKAPKQFDE V R++  A GPELPEL  GTPKF+ QQVK+ME+L+ RIEKEDSY++FRT  DPI+KLKGT   + D +NGG A  S  + V    GR   SS  G                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                   ES        P INLPQIRERFV G YVPAPGSYL+ S+E  PA GEAS   A   TS +XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                   XXXXXX        +A+  + ++    S P+ K      + +     +L LTRDSGRLG  A LTF+YEPLLDWAGLRAD+AGM  RM++ AED
Sbjct:    1 MVTMFEVGQDVVVAQRQWPGVNKEGGPGRVSKINSDGTIAVAYIIGNRSEARVPLKYVRLLEQPEGPTGSTGGVRSRSATRSLRGARAVKAPKQFDETVARMSASATGPELPELAAGTPKFIHQQVKDMEKLISRIEKEDSYEIFRTELDPIEKLKGTEGAEGDEQNGGDADRSGFAWVTAGRGRRVTSSTAGGGSVGSEEGAPQSSDKKRAGSPVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAAAVAGADVPTPPRRSPSTAVEDAMNVDSEGKADEEGDLAATGRNGVLLK---------------ESQHPVKPKAPPINLPQIRERFVRGCYVPAPGSYLVQSQEAVPARGEASGNQAPLLTSGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAGASKRSRKRPSFSRSGSSSPPLPSQSPKEEATXXXXXXXXXXXXSGTAVTKTASKASKASKPTGKASSSSLQTRP--TPVLPLTRDSGRLGGAAKLTFDYEPLLDWAGLRADIAGMVGRMVEWAED 519          
BLAST of mRNA_P-littoralis_Contig139.90.5 vs. uniprot
Match: A0A7S3LG46_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LG46_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.940e-7
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    4 TFAVHQLVKVAQRQWPGVNKEGGDARVLKMNEDGTVAVAYIIGKRSEASVHVKYV 58
            +F V  +VKV  R WPG+NK GG  R++K+N+D T  VAYI+G R E ++ V Y+
Sbjct:   19 SFKVKDVVKVESRTWPGINKPGGMGRIIKVNDDNTYNVAYILGGR-ELNIPVVYI 72          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.90.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JGP4_9PHAE2.910e-6844.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRP6_ECTSI2.280e-6548.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3LG46_9STRA5.940e-749.09Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..272
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 204..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 532..547
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..477
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 358..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..547

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:334919..338923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.90.5mRNA_P-littoralis_Contig139.90.5Pylaiella littoralis U1_48mRNAP-littoralis_Contig139 334803..338923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig139.90.5 ID=prot_P-littoralis_Contig139.90.5|Name=mRNA_P-littoralis_Contig139.90.5|organism=Pylaiella littoralis U1_48|type=polypeptide|length=547bp
MVTTFAVHQLVKVAQRQWPGVNKEGGDARVLKMNEDGTVAVAYIIGKRSE
ASVHVKYVQPTEETDRRAGRRGGANSRSSTRSLRLQRSVKAPKQFDEAVE
RVATVAAGPELPELVPGTPKFVLQQVKEMERLLCRIEKEDSYDMFRTARD
PIDKLKGTGEHQEDHENGGGAGDSHSSCVLLAPGRGGDSSLDGASVAGGG
RRSTAAASGQQQEVRANGGLKRASPSSSDKTQTSTSKAGGDDVGGSSGGG
GGGGGDEREQTSHKRPRKAAAAAAAVVVTGGATAVKEEKKGVRAEQQATV
ERDDVLLSDKEKKESAAFRAAATPRINLPQIRERFVSGHYVPAPGSYLIL
SEEPAYGEASTTAATSPEPDATAAAASASTSKNRGTATSVKRPQKKGSIS
RSKSTSPPLPSKDEATAVVTVKTPPAAGTASKTAVTATATATASALFSSP
ARDGPPSPPSEKTPPVKAENKQKDATLLALTRDSGRLGEEATLTFEYEPL
LDWAGLRADVAGMASRMLKGAEDWQAEKKKERNRQRQRRRRRWCRGE
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