mRNA_P-littoralis_Contig139.56.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: D8LRN9_ECTSI (Rubredoxin-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRN9_ECTSI) HSP 1 Score: 625 bits (1612), Expect = 1.630e-214 Identity = 328/470 (69.79%), Postives = 385/470 (81.91%), Query Frame = 3
Query: 207 MAGGMRRRDTAAAAAVGVAALALSGS-STVNAFIAVTSKGGLRSTAPRMLATRQLQMMAGGPRGRSGGG-VSIEGADGARVILASAMPIDSI--RQRINVDGDEYGDGEMMEGAPAAASTSMQQEEYQGFTGAPKRQTNQIVDPNSREATLSRKNNLLFSGLVLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
MA GM RR AAVGV ALALSG S+ +AF+ SKGGLRS APR A R LQM GGPRGRSGG V IEGADG+RV++ASAMP+ I +Q ++VDGD Y D EM+EGA AAS MQQE+YQGFTG +R+TNQ+VDPNSREATL+RKN LLF GLV+AT++AGVWV G AFV+RQT LVEAFADEMTYHIGD++EMELC+KEYKGKLGP +YREAMFK CM+++G++KAVTLETVR++K I K F+L+ KGVKL+VAA R TD+SQSNVRSKLLFLGGL+A+GD KA++ALEPL++NVQ+SF +GA ML+I+ R+MAESAL+AAI VPEG++LESGWEELGMDDQWA+RVA D+V+N+DPAGGLDFYKTGGP T DAESDP+AAKALAAME D EG AK++EC CGYKMFVAKGREFKFFGD FKCPECGAGKNKF E+ MDDD
Sbjct: 1 MARGMMRRQ----AAVGVVALALSGGGSSASAFVLGPSKGGLRSKAPRTPAVRPLQMAGGGPRGRSGGAPVRIEGADGSRVVVASAMPVQGIPQQQSMSVDGDGYDDSEMVEGAIGAAS-GMQQEDYQGFTGGQERRTNQVVDPNSREATLTRKNKLLFGGLVVATVTAGVWVTGTAFVNRQTDLVEAFADEMTYHIGDEKEMELCIKEYKGKLGPAMYREAMFKECMLAVGRKKAVTLETVRSIKFIFKQFRLSPLKGVKLVVAATRRTDRSQSNVRSKLLFLGGLVAEGDIKAQEALEPLRQNVQSSFPVDGANMLKIKERDMAESALRAAISDVPEGEMLESGWEELGMDDQWAARVATDMVDNDDPAGGLDFYKTGGPPTGDAESDPEAAKALAAMEEDMAAKKTEPQDEKEPEAEGTAKAYECTVCGYKMFVAKGREFKFFGDDFKCPECGAGKNKFLESSMDDD 465
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A835Z4L2_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4L2_9STRA) HSP 1 Score: 183 bits (464), Expect = 1.140e-47 Identity = 119/334 (35.63%), Postives = 169/334 (50.60%), Query Frame = 3
Query: 606 TNQIVDPNSREATLSRKNNL------LFSGL-VLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTE 1586
T +VDP R ++N +F+ L VL + V+ AG ++ RQ LVE +A EMT I EM+ C KEYK KLGPK +R MF A + + ++K +T +T+ A + + F K KL+ AA + + Q +RSKLLF G ++ + A + L+PLK + S+ + GA+++ ++AE AL+ + A E L GWE LGM + A + GG Y D ++ +AAK A EG A++FEC CGY ++VAKGRE+KFFGD FKCPECGA K KF E
Sbjct: 15 TGSLVDPAERIRLQQQRNQPGSARGEIFANLAVLGVLVGSVYFAGKSYFTRQETLVEGYASEMTDVISSSTEMDACHKEYKRKLGPKQFRGEMFAAFITELARKKPITCQTMMAADYVRRKFGFKDVKVAKLLAAAGQAVARKQPGLRSKLLFYGQRLSGSSDAAAKQLQPLKDLLAQSYRSGGAQIVESASISIAEQALRDSAHASGE---LPEGWELLGMSEAQARETLGE-------GGGEAMYAKLVKEAKDRDAATEAAKGGAGRGG-------------GSSEEGTARAFECGSCGYTLYVAKGREWKFFGDDFKCPECGASKGKFQE 325
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A1Z5JEC1_FISSO (Rubredoxin-like domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEC1_FISSO) HSP 1 Score: 146 bits (369), Expect = 5.530e-34 Identity = 107/324 (33.02%), Postives = 169/324 (52.16%), Query Frame = 3
Query: 684 LATISAGVWVAGNAFVDRQTQLVEA----FADEMTYHIGDDREMELCVKEYKGKL-GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFA-ANGAEMLRIRIRN-MAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMD------VVENEDPAGGLD--FYKTGGPATNDAE-SDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
+A +AG W N R TQ +A FA EM YH GD +EMELCVK+Y KL ++AM K + + ++K V+ + + ++ + LF+LN K + +VA + + + KLLFLG I K E + AL P+K+ +++++ A AE L ++ +AE+A +A ++A + Q L GW+ LG+D + A+++ + + E GG + K G D +P+ AK ++ + V+ +EC ECGY +F+A+GRE KFFG+GF+CPECGA K+KF D +D
Sbjct: 136 IALFAAGRW-GYNRVAGRVTQSADATLAAFAKEMLYHDGDFKEMELCVKDYNKKLLWLPTRKDAMLKTYLEAYAKKKTVSPQAIASISYVFTLFQLNEAKAAETLVALCKKMGTEKISSAGKLLFLGSRILKSPE-GKNALTPIKELIKSTYRDAQVAETLVETSQHAIAEAAYRATVQAAGKNQKSLTKGWQALGLDKEKATQIFEEEAKEGFISARETMYGGQTQKYDKKGNRLNPDGSYENPEDAKKAEEESSE----------------DTVSNVYECGECGYTLFIAQGRETKFFGEGFRCPECGASKDKFNARDDVED 441
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S3DRF8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DRF8_9STRA) HSP 1 Score: 145 bits (367), Expect = 2.610e-33 Identity = 119/380 (31.32%), Postives = 186/380 (48.95%), Query Frame = 3
Query: 528 EGAPAAASTSMQQEEYQGFTGAPKRQTNQIVDPNSREATLSRKNNL----LFSGLVLATIS---AGVWV---AGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFA--ANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVEN------EDPAGGLD--FYKTGGPATNDAE-SDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1592
E P A++ Q E+ Q + ++ D N A + ++ + S L++ +I+ AG W + V+ +++AFA EM YH GD EM+LC +Y KL GP E M K + ++K V+ +++ + + L KL+ K ++V R ++ + KLLFLG I K + +ALEP+K ++A++ A ++ + +AE++ +AA++A + Q L GWE LG+D A R+ + E E GG + K G D +DP+ AKA AA EA+ E ++ +EC ECGY +F+A+GRE KFFG FKCPECGA K+KF D
Sbjct: 140 EADPYASAFDSQMEKMQSYA-------ERVEDANQGSALTEKFKSMDLQDIISTLIIPSIALFAAGRWAFNRVSSRVVENTDSILDAFAREMIYHDGDFDEMKLCYNDYSRKLLILGPTR-TETMLKMYLEVYAKKKTVSPQSIVTLSYVFTLAKLSEEKAADVLVKLCRQMGPNKISSAGKLLFLGSRILKSPD-GRKALEPIKDMIKATYRDEAVAETLVDTSQQAIAEASYRAAVQAAGKSQTALSLGWETLGLDRDTAQRIFDEEAEEGFVSARETMYGGQSTKYDKKGRIIAKDGSLADPEEAKA-AAEEAEEE--------------EAISNVYECGECGYTLFIAEGRESKFFGTDFKCPECGASKDKFEARD 495
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A1E7FDG3_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDG3_9STRA) HSP 1 Score: 140 bits (354), Expect = 6.230e-32 Identity = 105/326 (32.21%), Postives = 165/326 (50.61%), Query Frame = 3
Query: 666 LFSGLVLATISAGV---W----VAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAA-NGAE-MLRIRIRNMAESALKAAI-EAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDDD 1604
+ S L++ TI AG W V+G D+ T +++FA EM YH GD EM+LC K+Y KL GPK M K+ + ++K V+ +++ + + +FKL+ K +L+V+ + + + KLLF G I K E + AL P++ ++ S+ AE M+ + MAE+A + ++ E + + L GWE LG+D A R+ +E ED D + T +S AK ++ D + + CQ+CG+ +F+AKGRE KFFG+GF CPECGA K++F D+D+D
Sbjct: 142 IISTLIVPTIFAGAGLKWGLTKVSGKVS-DKVTIALDSFAKEMVYHDGDFEEMKLCYKDYSKKLVLLGPKK-NSIMIKSYLKLYSKQKLVSPKSISTLSYVFSIFKLSEEKAAQLLVSLCKEMGNERMSSAGKLLFFGSRILKSPE-GKAALTPIRDMIKGSYREIEVAETMVETSQQAMAEAAFRTSVLEGGKDQKNLTMGWEVLGLDKDTAVRI---FIEEED-----DGFITAREKMYGGQSTKYDAKGNI-IDKDGKLKDPDNAIGDDEEAQPTSNVMGCQDCGFTLFIAKGREAKFFGEGFVCPECGAAKDRFDPVDIDED 455
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A448YYL6_9STRA (Rubredoxin-like domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYL6_9STRA) HSP 1 Score: 128 bits (322), Expect = 7.870e-28 Identity = 105/321 (32.71%), Postives = 148/321 (46.11%), Query Frame = 3
Query: 681 VLATISAGVWVAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKL---GPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGA---EMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMD------VVENEDPAGGLDF-YKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMDD 1601
V A + GV A D+ +E FA+EM YH GD EM+LCV Y KL GP + M K + +++ V+ + + LFKL+ K +MV+ + KLLF G I K E + AL+P+++ + +S+ G M+ MAE+A K A+ + Q L GWE LG+D + A R+ + + E E GG Y G +D + A+ A E + + + EC EC Y +F+AKGRE KFFGD FKCPECGA K+KF DM D
Sbjct: 156 VAAGVRWGVTKASGKVSDQADGSLEDFANEMVYHDGDFEEMKLCVNAYNKKLMWLGPNKSK-TMLKKYLKLYCKKRIVSPQAI-------SLFKLSEDKAAAIMVSLCEDMGVDGLSTAQKLLFFGTRILKSAE-GKAALDPIREILXSSYRGEGMVAESMVETSQTAMAENAYKTAVVNGGKDQTSLTVGWEVLGLDKEEAMRIFEEEAEAGFISEREKLYGGQSQKYDDKGNXIDDDGNLEDPENAIGADEPE----------------KPASNVMECTECSYTLFIAKGREAKFFGDNFKCPECGADKDKFEPKDMSD 451
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2WQG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WQG7_9STRA) HSP 1 Score: 127 bits (320), Expect = 2.510e-27 Identity = 103/317 (32.49%), Postives = 158/317 (49.84%), Query Frame = 3
Query: 681 VLATISAGVWVAGNA-------FVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGK----LGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASF----AANGAEMLRIRIRNMAESALKAAIEAVPEGQ-LLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFT 1583
V ++AG WV F Q + +ADEM +H GD EM++C +Y K LGP ++ M K + ++K V+ + + ++ + L+KL+ K ++VA + + S+ KLLF G I K E LEP+K+ + S+ + +G E++ M E+A + A+ A + Q L GWE LG+D++ A+ + +V + G Y +G +S + + +E XXXXXXXXX FEC CGY +F+AKGR+FKFF D F+CPECGA K+KF
Sbjct: 182 VFIPLTAGYWVIKQGYEKSSVIFAGSAEQTLVDYADEMVFHDGDFEEMKMCHNDYSKKKLVWLGPNK-KDTMMKRYLEIYAKKKTVSPQAISSLSYVFSLYKLSEDKAADILVALCNSMPEKISSA-GKLLFFGRCILKSKE-GRARLEPIKEMLALSYRDGGSISGEEIVERSQIAMGEAAYRTAVAAAGKKQESLTVGWEVLGLDEETATTIFNEVAKIGFKTGREVKYGSG---NQQYDSKGRRLEKTGKLENPEEATDXXXXXXXXXENTPTGSVFECGGCGYTLFIAKGRDFKFFSDTFECPECGAKKDKFV 492
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2XMQ9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XMQ9_9STRA) HSP 1 Score: 127 bits (319), Expect = 3.250e-27 Identity = 102/325 (31.38%), Postives = 158/325 (48.62%), Query Frame = 3
Query: 663 LLFSGLVLATISAGVWVAGNAFV---DRQTQLVEAFADEMTYHIGDDREMELCVKEYK----GKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRI---RNMAESALK-AAIEAVPEGQLLESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKAL--AAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEADMD 1598
L+F +V A++ W G A V ++ +L+EA+A EM YH GD EM+L K+Y LGP L ++ M K+ + ++K V+ +++ + +L L+KL+ K + + K++ + KLLF I K E A+ AL P+K+ + AS+ + +I + + E+A K I + L GW+ LG+ + A + E G ++ + + D K+ +AL AD + +FEC ECG+ +FVAKGREFKFFGD FKCPECGAGK+KF D
Sbjct: 177 LIFPSIVGASLLK--WAYGKAAVYTTEKTAELLEAYATEMCYHDGDVEEMKLAHKDYSRVKLAYLGP-LKKDKMLKSFLTVYAKKKNVSPQSISTLSHVLTLYKLSEEKAAQAIKELCMDLGKNKISSVGKLLFYATQILKSKE-AKAALAPIKQMMAASYEGMDVDANQIVTGSQKAIGEAAYKFTVINGGKKQTKLPEGWKILGL-----KKEAAQAIFEECQKEGFISWREEHYSMQSTKYD-KSGRALDDQGKRADGTDPTEDAPEEEEELSMSTSNAFECGECGFTIFVAKGREFKFFGDNFKCPECGAGKDKFVGRSDD 491
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: B7GE71_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GE71_PHATC) HSP 1 Score: 126 bits (316), Expect = 7.360e-27 Identity = 101/331 (30.51%), Postives = 164/331 (49.55%), Query Frame = 3
Query: 666 LFSGLVLATI---SAGVW----VAGNAFVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLY----REAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASF--AANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESD---PKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKSFECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKF-TEADMDDD 1604
+ + L+L ++ +AG W V G V R L+++FA EM YH GD EM+LC+++Y KL +Y R+ M K + + ++K V+ + ++ +L F+++ L+V+ R + KLLFLG I K E + AL P+K +++++ + M+ + +AE++ ++ + A + Q L GW+ LG++ A R+ + + Y GG T + +A K +AD GV+ +EC ECGY +FVA+GRE KFFG GFKCPECGA K +F DMD++
Sbjct: 171 IIATLILPSVVVFAAGRWGFNKVYGKVQV-RTEALLDSFAKEMLYHDGDYNEMKLCIQDYNQKL---IYLPNRRDVMLKRYLAAYAKKKTVSPLAISSLSFVLTQFQMSEEAAAALLVSLCRQMGTDKIASAGKLLFLGSCILKSPE-GQAALTPIKDLIKSTYREVSVAEAMVETSQQAIAEASYRSVVLAAGKQQKSLTPGWDVLGLERDVAQRIYDEEAKEGFRTERETMY--GGQTTRYDKKGRIVDRAGKLKNPADADEDDDDEPQG--------GVSNVYECGECGYTLFVAQGRESKFFGTGFKCPECGAAKKQFKARDDMDEE 486
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Match: A0A7S2K0X4_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K0X4_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.730e-26 Identity = 93/302 (30.79%), Postives = 145/302 (48.01%), Query Frame = 3
Query: 702 GVWVAGNA---FVDRQTQLVEAFADEMTYHIGDDREMELCVKEYKGKLGPKLYREAMFKACMISIGQRKAVTLETVRAVKCILKLFKLNAFKGVKLMVAAARTTDKSQSNVRSKLLFLGGLIAKGDEKAEQALEPLKKNVQASFAANGAEMLRIRIRNMAESALKAAIEAVPEGQL-LESGWEELGMDDQWASRVAMDVVENEDPAGGLDFYKTGGPATNDAESDPKAAKALAAMEADXXXXXXXXXXXXXXXXEGVAKS-FECQECGYKMFVAKGREFKFFGDGFKCPECGAGKNKFTEAD 1592
G WV N+ + Q + ++A+EM YH GD EM++C EY+ KLG R M + + ++K V+ + + ++ + L+ L+ K++V AA +Q RSKLLF G I K E + L+P++ + +++ + G ++ + + ++A K A+ A + Q L GWE LG+ A V V + + Y GGP E + M+ + +G S FEC CGY +F AKGREFKFF D FKCPECG+ K++F D
Sbjct: 143 GNWVYKNSKFLYDKGQADTLASYANEMIYHDGDFEEMKMCQNEYRRKLGIGPKRRKMLTSYLEQYAKKKVVSPQAISSLSYVFSLYNLSEKDAAKVIVKAAENLS-TQPASRSKLLFFGEHILKSPEGLTE-LQPIRDMLASAYRSGGPAIVANAQKTIGQAAYKNAVIAAGDEQTSLTVGWELLGLTKDEAETVYEAVKSDGFQSDAKKLY--GGPKQEFDEKGRRIDTKGKLMDKEDEDSAS----------DGPKGSIFECGNCGYTLFPAKGREFKFFPDDFKCPECGSPKDQFIGRD 430 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.56.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig139.56.1 >prot_P-littoralis_Contig139.56.1 ID=prot_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp MAGGMRRRDTAAAAAVGVAALALSGSSTVNAFIAVTSKGGLRSTAPRMLAback to top mRNA from alignment at P-littoralis_Contig139:229510..239236- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig139.56.1 ID=mRNA_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9727bp|location=Sequence derived from alignment at P-littoralis_Contig139:229510..239236- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig139:229510..239236- >mRNA_P-littoralis_Contig139.56.1 ID=mRNA_P-littoralis_Contig139.56.1|Name=mRNA_P-littoralis_Contig139.56.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1407bp|location=Sequence derived from alignment at P-littoralis_Contig139:229510..239236- (Pylaiella littoralis U1_48)back to top |