mRNA_P-littoralis_Contig139.25.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig139.25.1
Unique NamemRNA_P-littoralis_Contig139.25.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 588 bits (1516), Expect = 1.250e-207
Identity = 346/412 (83.98%), Postives = 366/412 (88.83%), Query Frame = 1
Query:    1 MPSTLSKASGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSR 1236
            MPSTLSKASGSVERA+ATTDIDR CGDTN TPLMVASV+GSSRVV+DLLRQGASVS+ADSDGYTALHH+VYH+HLAVS  LIEAGADLEAR                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NPLLSAYGSLP+G AVYNGHL+VV EL VHWYGTDRCT+DGG LALATAASRKHV IV FLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGG ++ S+RAYVNM HGTLPETYD+FVFQE PLVSTFNLGSFHA RFAR+LLEAGADAT+GVRFPCDSDEGEED+ FIG PL+LA SYFRRFSPMRVHREMV+GLKGVIRLL QEEAVH+VSWTWPIDTGRSVER SRKKSTSIARMLPLL+RRAAKPRVLLAAMSR
Sbjct:    1 MPSTLSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSEL-VHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNINVSTRAYVNMAHGTLPETYDDFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEDFIGTPLELATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHAVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 411          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 7.590e-198
Identity = 350/404 (86.63%), Postives = 361/404 (89.36%), Query Frame = 1
Query:   25 SGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSR 1236
            SGSVER IATTDIDR CGDTNQTPLMVASV+GSSRVVRDLLRQGASVS+ADSDGY ALHHAVYHKHLAVSK LIEAGADL+AR  G+DTPL VAATKGFCQEM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA                   EL V+WYGTD CTSDGG LALATAASR  V IV FLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQG K ST SRAYVNMDHG+LPETYDEFVFQE PLVSTFNLGSFHA RFAR+LLEAGADAT+GVRFPCDSDEGEED+GFIG PLDLA SYFRRFSPMRVHREMV+GLKGVIRLL QEEAVHSVSWTWPIDTGRSVER SRKKSTSIARMLPLL+RRAAKPRVLLAAMSR
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXEL-VYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGRKASTDSRAYVNMDHGSLPETYDEFVFQEPPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSPMRVHREMVRGLKGVIRLLRQEEAVHSVSWTWPIDTGRSVERASRKKSTSIARMLPLLKRRAAKPRVLLAAMSR 801          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 563 bits (1452), Expect = 2.640e-192
Identity = 339/412 (82.28%), Postives = 355/412 (86.17%), Query Frame = 1
Query:    1 MPSTLSKASGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSR 1236
            MPSTLSKASGS +  IATTDIDR CG TNQTPLMVASV+GSSRVVRDLLRQGASVS+ADSDGYTALHHAVYHKHLAVSK                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NPLLSAYGSLP+GMAVY+GHLEVVREL VHWYGTDRCTSDGG LALATAASRKHV IVAFLC+AGVVDTEGVALCAAIEGCSEACVYLLLRRQGG  +T +RAYVNMDHGTLPETY+EFVFQE PLVSTFNLGSFHA RFAR+LLEAGADAT+GVRFPCDSDEGEED+GFIG PLDLA SY RRFS M+VHREMV+GLKGVIRLL QEEAVHSVSWTWPIDTGRS ERVSRKKSTSIARM+PLL+RRAA  RVLLAAMSR
Sbjct:  422 MPSTLSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVREL-VHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYEEFVFQETPLVSTFNLGSFHAPRFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYVRRFSTMKVHREMVRGLKGVIRLLQQEEAVHSVSWTWPIDTGRSAERVSRKKSTSIARMVPLLKRRAATLRVLLAAMSR 832          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 493 bits (1270), Expect = 6.630e-170
Identity = 321/459 (69.93%), Postives = 335/459 (72.98%), Query Frame = 1
Query:    1 MPSTLSKASGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAI-----------------------------------------------EGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSR 1236
            MPSTLSKASGS +  IATTDIDR CGDTNQTPLMVASV+G SRVVRDLLRQGASVS+ADSDGYTALHHAVYHKHLAVSK                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSAYGSLP+ +             LV+WYG DRCTSDGG LAL TAASRKHV IV FL DAGVVDTEGVALCAAI                                               EGCSEACVYLLLRRQGG  +T +RAYVNMDHGTLPETYDEFVFQE PLVSTFNLGSFHA  FAR+LLEAGADAT+GVRFPCDSDEGEED+GFIG PLDLA SYFRRFS M VHREMV  LKGVIRLL QEEAVHSVSWTWPID GRSVER SRKK TSIARM+PLL+RRAAKPRVLLAA+SR
Sbjct:    7 MPSTLSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGVVDTEGVALCAAIXWRCTMDIWKWSASLCIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEGCSEACVYLLLRRQGGNANTGTRAYVNMDHGTLPETYDEFVFQETPLVSTFNLGSFHAPGFARLLLEAGADATSGVRFPCDSDEGEEDEGFIGTPLDLATSYFRRFSSMSVHREMVPELKGVIRLLRQEEAVHSVSWTWPIDNGRSVERASRKKPTSIARMVPLLKRRAAKPRVLLAALSR 465          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.050e-78
Identity = 180/388 (46.39%), Postives = 216/388 (55.67%), Query Frame = 1
Query:  103 VASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEAR---HVGLD---TPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYG--SLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEG-EEDQGFIGKPLDLAISYFRRFSPMRVHREMVQ-GLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSR 1236
            VAS +G  RVVR LLR GA VS AD+DG TALH ++ +KHLAVSK L++AGADLEAR   H  L    TPL VAA KGF + M                                         NP+L+AY   SLP+ +A  NG L VVREL    +G D C+ DGG  AL  AAS+  V IV FL D GVVD EG+ALCAA+EG  E C+ LLLR QG   +  +RAY NM H T    Y   +F + PLVS F LG F++ R  R+LL AGAD  + VR+     EG E D      PL +A S    +       E V+ GLKGVIRLL Q +AVH+ SW WP          + +KST I RMLP L+RRA KPRV LA +SR
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGM-------------------------VMLIHAGVKGFVGAKANPILAAYDGESLPLDVAAENGQLGVVRELEQR-FGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGVVDAEGIALCAAVEGRREECIELLLRTQGCNANAIARAYANMTHDTTLPMYSNQLFPDTPLVSAFELGGFYSPRITRLLLGAGADVASRVRY-----EGIEGDCVMHDTPLTIAESTLPLWETYGETSEDVEFGLKGVIRLLKQVDAVHATSWCWPS---------ALEKSTPIVRMLPGLKRRATKPRVALAPLSR 384          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.360e-67
Identity = 165/423 (39.01%), Postives = 216/423 (51.06%), Query Frame = 1
Query:   22 ASGSVERAI-----ATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARH---------VGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAI--SYFRRFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRAAKPRVLLAAMSRCV 1242
            +SGSVER +       T+IDR C +   T LM A+  G  R+VR LLR GA VS++  DG+TALH A+  ++LAV+K LI+AGA++EA+          V   TPL +AA +GFC+ M                                         NPLL    + P+ +A + GHL VV+EL V  +G D C  +G   AL TAA   H  I+ FL DAGV+DT+G ALC AIEG +EAC+ LL+ R+GG      R Y N+D+            +E PL+  F  G  HA R  R LL+ GAD    VRF  +      D+  +   + L    +YF+     RV      GLKGV+RLL QE AVH+ SW WP DT R+         T I R  P+  R  ++P VLLAAM RCV
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQEL-VQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGVIDTDGTALCDAIEGRNEACLKLLVSRRGGSEHMVERNYTNIDNA-----------RENPLLCAFGTGRGHAPRITRFLLDHGADTKNKVRFGIEGLGEMIDEPLVAAKITLRHEQTYFKDADVDRV-----DGLKGVVRLLQQEAAVHANSWAWPTDTDRA---------TKIVRK-PI--RPGSRPEVLLAAMGRCV 419          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 4.930e-58
Identity = 115/179 (64.25%), Postives = 121/179 (67.60%), Query Frame = 1
Query:    1 MPSTLSKASGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVREL 537
            MPSTLSKASGS++  IATT IDRGCGDTNQTPLMVASV+GSSRVVRDLLRQGASVS+ADSDG TALHH+VYH HLAVSK LIEAGADLEARH G DTPL VAATKGFCQ MK                                        NPLLSA GSLP+ MAVYN  L   R L
Sbjct:    1 MPSTLSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGMKLLMDSRLDDGATPLFLAASDGRLEAVRVLLRANA------NPLLSACGSLPLYMAVYNRPLVRNRSL 173          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 3.170e-47
Identity = 153/436 (35.09%), Postives = 189/436 (43.35%), Query Frame = 1
Query:    1 MPSTLSKA-----SGSVERAI-----ATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAG------ADL---EARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPM--RVHREMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLR-RRAAKPRVLLAAMSRCV 1242
            MPST S       +GSVER +       T+IDR C +   T LM A+  G  R+VR LLR GA VS++  DG+                            AD    +   V   TPL +A  +GFC  M                                         NP+L    + P+ +A + GHL VV+EL V  +G D C+ +G   AL TAA   H  I+ FL DAGV DT+G ALC AIEG SEAC+ LL+ R+GG    +   Y N D              +  LV  F  G  +A R  R LL+ GAD    VRF      GE      G PL  A    R           E V GLK V+RLL QE+AVH+ SW WPIDT R+         T I R  P  +     +P VLLAAM RCV
Sbjct:    1 MPSTTSTLYNAAWTGSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQGQTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQEL-VQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGVKDTDGTALCDAIEGRSEACLKLLVGRRGGNAHMAESHYTNTDSAC-----------DNALVCAFGAGRGYAPRMTRFLLDHGADTKKKVRFEIKG-LGE----IAGGPLVAAKIILRHEQTHFEDADEEGVDGLKEVVRLLRQEDAVHANSWAWPIDTDRA---------TKIVRKTPAFKIHPGPRPCVLLAAMGRCV 410          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: D8LPL4_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL4_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.390e-19
Identity = 134/351 (38.18%), Postives = 181/351 (51.57%), Query Frame = 1
Query:   91 TPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHV---GLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCT-SDGGTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAA--RFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKP--LDLAISYFR---RFSPMRVHREMVQGLKGVIRLLPQEEAVHSVSWTW 1110
            TPLM+A+  G SR+V  LL +GA   I   +G TALH +  + H+ VS  LI AGAD+        G                  XXXXXXX         XXXXXXXXXXXXXXXXXXXXXXXX  + +  G +P+ +A     +++VREL V   G + C  SDGG +AL  AA   H+ I+  L + GVVD+ G+ALCAA+    E  V LLL+R     S    +Y N   G++ +          PL+S     S   +  R  R L++AGA  TT   F   + EG     F+ +   LD+  +  R      P    ++M  GL+G+ +L+ Q +AVH+VSW W
Sbjct:   48 TPLMLAADGGYSRIVSFLLHKGAIAGIMGDEGVTALHVSARNGHVVVSLMLIRAGADVGLSCFTSGGXXXXXXXXXXXXXXXXXXXXXXXXXVDRRLEDGAXXXXXXXXXXXXXXXXXXXXXXXXXXIATMEGYVPLDVATEKFRVDIVREL-VDDVGIEGCGGSDGGMVALRLAAQNGHLDILHILHERGVVDSSGLALCAALMHGGEKTVKLLLQRAAEYFSCGGSSYANSAVGSIGK----------PLLSCLVRDSLRGSSRRVMRRLIDAGA--TTDFTFTRINYEGN----FMCQTTALDMVTTLLRDKGSGGPSFTQQQMY-GLRGMRQLMLQVDAVHAVSWGW 380          
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Match: D7FY91_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY91_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.130e-18
Identity = 166/425 (39.06%), Postives = 203/425 (47.76%), Query Frame = 1
Query:   13 LSKASGSVERAIATTD----IDRGCGDT-NQTPLMVASVLGSSRVVRDLLRQGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLDVAATKGFCQEMKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLL-----SAYGS--LPIGMAVYNGHLEVVRELLVHWYGTDRCTSDG-GTLALATAASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVSTSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAGADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHR-EMVQGLKGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARM---LPLLRRRAAKPRVLLAAMSR 1236
            L+   GS ERA+A       ID   GD+   TPLM+A+  G  RVVR LL  GA++SI D  G  AL                                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +PLL     S  G   LP+ +A       VVRELL    G +RC  +  G  AL  A + +HVGIVA L  AGVVD +G AL AA     EA V  LLR+  GK S S  AYVN  +           F   PL+     G   +AR  R+L++AGAD T   R       G++ Q         A+         +    E    L+   RLL Q EA H++SW WP  +  SV+R  R++  + A +   LP+ RR     R LL A+SR
Sbjct:   20 LAAMDGSAERALALLSSRDPIDVNQGDSAGCTPLMLATTNGHPRVVRILLNHGANMSIMDDVGSDALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNADPLLGNVLPSTGGVCFLPLDVAXXXXXSAVVRELLQR-LGIERCGGESRGVDALCLAVTGRHVGIVAMLAHAGVVD-QGSALAAAAAQGYEASVKFLLRQHEGKHSASRSAYVNKLNR----------FGLTPLLENITCGHC-SARIVRLLVDAGADTTAAYRLT-----GKKGQAMAATTHLTAMGCLLLEKKAKGDTGEEPHNLQATFRLLLQVEAAHAISWVWPTGS-HSVDRPPRRQRRAEAPVRLTLPMTRRDTGTRRALLGAVSR 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig139.25.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHQ8_9PHAE1.250e-20783.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1W5_9PHAE7.590e-19886.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JL58_9PHAE2.640e-19282.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5L0_9PHAE6.630e-17069.93Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNS0_9PHAE1.050e-7846.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSL5_9PHAE1.360e-6739.01Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
D8LH66_ECTSI4.930e-5864.25EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LP44_ECTSI3.170e-4735.09EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LPL4_ECTSI1.390e-1938.18EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7FY91_ECTSI1.130e-1839.06EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FY... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig139contigP-littoralis_Contig139:123162..124591 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LH66
Model size1242
Max annot lvl2880.D8LH66|-
Hectar predicted targeting categoryother localisation
Exons2
Evalue8.08e-59
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size1242
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789640.800433-CDS-P-littoralis_Contig139:123161..1238661680789640.800433-CDS-P-littoralis_Contig139:123161..123866Pylaiella littoralis U1_48CDSP-littoralis_Contig139 123162..123866 -
1680789640.8115592-CDS-P-littoralis_Contig139:124054..1245911680789640.8115592-CDS-P-littoralis_Contig139:124054..124591Pylaiella littoralis U1_48CDSP-littoralis_Contig139 124055..124591 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig139.25.1prot_P-littoralis_Contig139.25.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig139 123162..124591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig139.25.1

>prot_P-littoralis_Contig139.25.1 ID=prot_P-littoralis_Contig139.25.1|Name=mRNA_P-littoralis_Contig139.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=414bp
MPSTLSKASGSVERAIATTDIDRGCGDTNQTPLMVASVLGSSRVVRDLLR
QGASVSIADSDGYTALHHAVYHKHLAVSKYLIEAGADLEARHVGLDTPLD
VAATKGFCQEMKLLMDAGANVDSRLDDGATPLYVAAQKGKLGAVRVLLRA
NANPLLSAYGSLPIGMAVYNGHLEVVRELLVHWYGTDRCTSDGGTLALAT
AASRKHVGIVAFLCDAGVVDTEGVALCAAIEGCSEACVYLLLRRQGGKVS
TSSRAYVNMDHGTLPETYDEFVFQEIPLVSTFNLGSFHAARFARVLLEAG
ADATTGVRFPCDSDEGEEDQGFIGKPLDLAISYFRRFSPMRVHREMVQGL
KGVIRLLPQEEAVHSVSWTWPIDTGRSVERVSRKKSTSIARMLPLLRRRA
AKPRVLLAAMSRCV
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mRNA from alignment at P-littoralis_Contig139:123162..124591-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig139.25.1 ID=mRNA_P-littoralis_Contig139.25.1|Name=mRNA_P-littoralis_Contig139.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1430bp|location=Sequence derived from alignment at P-littoralis_Contig139:123162..124591- (Pylaiella littoralis U1_48)
ATGCCATCAACTCTGAGCAAAGCCAGTGGTTCGGTCGAGCGTGCGATTGC AACGACCGACATCGACCGAGGCTGTGGTGATACGAACCAGACACCGCTGA TGGTGGCCTCCGTCCTTGGTTCCTCGCGCGTTGTCAGAGACCTTCTGCGG CAGGGTGCCAGCGTCTCGATAGCGGACAGCGACGGTTATACCGCTCTGCA CCACGCGGTTTATCATAAACACCTGGCCGTGAGCAAATACCTGATCGAGG CGGGAGCGGACCTTGAAGCGAGGCATGTTGGCCTAGATACACCACTTGAC GTGGCCGCGACGAAAGGGTTTTGCCAAGAAATGAAGCTGCTGATGGACGC AGGCGCGAATGTGGACAGCAGGCTCGACGACGGAGCCACACCCCTATACG TTGCGGCGCAAAAAGGGAAATTGGGTGCCGTCAGAGTTCTCCTTCGGGCG AACGCGAATCCGCTCTTGTCAGCGTACGGCAGTCTGCCGATAGGAATGGC GGTCTACAATGGACATCTGGAAGTGGTCCGCGAGCTCGTGCATTGGTACG GAACCGATCGCTGTACAAGCGACGGCGGCACACTGGCTCTCGCAACGGCC GCTTCTCGCAAACACGTCGACATCGTTGCATTCCTGTGCGATGCCGGAGT GGTTGACACGGAGCGTACGGCAGTCTGCCGATAGGAATGGCGGTCTACAA TGGACATCTGGAAGTGGTCCGCGAGCTCGTGCATTGGTACGGAACCGATC GCTGTACAAGCGACGGCGGCACACTGGCTCTCGCAACGGCCGCTTCTCGC AAACACGTGGGCATCGTTGCATTCCTGTGCGATGCCGGAGTGGTTGACAC GGAGGGCGTGGCCCTGTGTGCCGCCATTGAAGGATGTAGCGAGGCGTGCG TCTACCTTCTCCTGCGGAGACAGGGGGGAAAGGTCAGCACAAGTTCGCGT GCCTACGTCAATATGGACCACGGTACTTTGCCGGAAACCTATGACGAGTT CGTGTTTCAAGAAATACCGCTGGTGAGCACGTTCAATCTGGGAAGCTTTC ATGCTGCCAGATTCGCGCGCGTGCTACTTGAAGCCGGGGCGGACGCGACA ACAGGCGTTCGGTTTCCGTGCGACAGTGATGAGGGGGAAGAAGACCAAGG GTTCATCGGCAAGCCCCTGGACTTGGCTATATCTTATTTTCGCAGATTCA GTCCAATGAGAGTCCACCGCGAGATGGTGCAGGGGCTGAAGGGTGTCATC CGCCTGCTGCCACAGGAGGAGGCAGTGCACTCGGTGTCCTGGACGTGGCC AATTGACACCGGTCGTTCTGTAGAGCGTGTGTCCCGGAAGAAATCAACAT CGATCGCTCGCATGCTCCCGCTTCTGAGGCGGAGGGCGGCGAAGCCTCGG GTGCTCTTGGCGGCCATGTCCAGGTGCGTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig139:123162..124591-

>mRNA_P-littoralis_Contig139.25.1 ID=mRNA_P-littoralis_Contig139.25.1|Name=mRNA_P-littoralis_Contig139.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1242bp|location=Sequence derived from alignment at P-littoralis_Contig139:123162..124591- (Pylaiella littoralis U1_48)
ATGCCATCAACTCTGAGCAAAGCCAGTGGTTCGGTCGAGCGTGCGATTGC
AACGACCGACATCGACCGAGGCTGTGGTGATACGAACCAGACACCGCTGA
TGGTGGCCTCCGTCCTTGGTTCCTCGCGCGTTGTCAGAGACCTTCTGCGG
CAGGGTGCCAGCGTCTCGATAGCGGACAGCGACGGTTATACCGCTCTGCA
CCACGCGGTTTATCATAAACACCTGGCCGTGAGCAAATACCTGATCGAGG
CGGGAGCGGACCTTGAAGCGAGGCATGTTGGCCTAGATACACCACTTGAC
GTGGCCGCGACGAAAGGGTTTTGCCAAGAAATGAAGCTGCTGATGGACGC
AGGCGCGAATGTGGACAGCAGGCTCGACGACGGAGCCACACCCCTATACG
TTGCGGCGCAAAAAGGGAAATTGGGTGCCGTCAGAGTTCTCCTTCGGGCG
AACGCGAATCCGCTCTTGTCAGCGTACGGCAGTCTGCCGATAGGAATGGC
GGTCTACAATGGACATCTGGAAGTGGTCCGCGAGCTCCTCGTGCATTGGT
ACGGAACCGATCGCTGTACAAGCGACGGCGGCACACTGGCTCTCGCAACG
GCCGCTTCTCGCAAACACGTGGGCATCGTTGCATTCCTGTGCGATGCCGG
AGTGGTTGACACGGAGGGCGTGGCCCTGTGTGCCGCCATTGAAGGATGTA
GCGAGGCGTGCGTCTACCTTCTCCTGCGGAGACAGGGGGGAAAGGTCAGC
ACAAGTTCGCGTGCCTACGTCAATATGGACCACGGTACTTTGCCGGAAAC
CTATGACGAGTTCGTGTTTCAAGAAATACCGCTGGTGAGCACGTTCAATC
TGGGAAGCTTTCATGCTGCCAGATTCGCGCGCGTGCTACTTGAAGCCGGG
GCGGACGCGACAACAGGCGTTCGGTTTCCGTGCGACAGTGATGAGGGGGA
AGAAGACCAAGGGTTCATCGGCAAGCCCCTGGACTTGGCTATATCTTATT
TTCGCAGATTCAGTCCAATGAGAGTCCACCGCGAGATGGTGCAGGGGCTG
AAGGGTGTCATCCGCCTGCTGCCACAGGAGGAGGCAGTGCACTCGGTGTC
CTGGACGTGGCCAATTGACACCGGTCGTTCTGTAGAGCGTGTGTCCCGGA
AGAAATCAACATCGATCGCTCGCATGCTCCCGCTTCTGAGGCGGAGGGCG
GCGAAGCCTCGGGTGCTCTTGGCGGCCATGTCCAGGTGCGTG
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