prot_P-littoralis_Contig138.88.32 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig138.88.32
Unique Nameprot_P-littoralis_Contig138.88.32
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length848
Homology
BLAST of mRNA_P-littoralis_Contig138.88.32 vs. uniprot
Match: D8LRB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB1_ECTSI)

HSP 1 Score: 759 bits (1961), Expect = 1.840e-262
Identity = 498/822 (60.58%), Postives = 594/822 (72.26%), Query Frame = 0
Query:   26 TVSVASCDDLPTSAITQDTVLELTATEISCDVNTALEITNGASLQMISSEQGGTTINNIKIWVQDGTFLCDVPNLEWTSVETVSGIHNFQVRGGAAMRTEEDTSATFVQDVAFIACELPAEDFSGGSEGAAIANFGSLVFQGNTVFRDTPDAGALYTWGSVTFEKDATFDNNKSNANGEGGGSGAGLYIDSFGIAXXXXXXXXXXXXXXXXXXXXXXXXXXFSVSSSEEAMVFSGPVTVSGNSGAQGAITLWSGQSVIFESLVTFTDNIMAPKLYGDSSLGGAMWVTNYGGDPVEFLGGVTATGNSAKNGGVFYLSNEASVILSAPVNISGNEARLAXXXXXXXXXXXXXXXXXXXXXXXXXTICPGFNIVEGEVVFDEGETFTAGTKDLCYFGNDATGSAPVDLVEEFDCEAYSAIAPVTNEHPYLVLDTAAVKSWDFGSGGGFSCDTQLIVYVTGGEELTVTSTAASSTMSNVHLEVIGYTSLVLDVPDLTMSGIFQSQVGGAVFVEDGSSLDIVNDITFQSNSIQAEYSLGQWVPRGGAAIFSAGTTTFHGRAEFFGNGQYEADANGYEPSNEDGGALSNSGTMTFMKRGRFIDSFNXXXXXXXXXXXXXXXXXXXRAIFTNNSAGVAYTDDGEXXXXXXXXXXXKGESSTILFNGVAIFKDNVGALGGCALASKGWVFSENDDDLAAGDNKITFADKAKFKDNYC-DGEYPTIYDDRDFADWADNNKGGGAILAYGATSIEFANTAVFKRNEGPNGGAITNSAEISFISDAKLVTADNVVTGTLSQCSDILNNDVGTIVIGTEAITGASDSLCERTAA 846
            T +V SC D P S IT DTVLELTA EI+CD NT +E+ +GA+++ I+S    T +NN+K WV++G FLC VP L+WTSVETV+ IHN QV GGAAMR E  ++ATF +DV F ACELP EDFSGGSEGAAIAN G+L+FQG   F+DTPD GALYTWG +TFEKDA F+NNKS   G+G GSGAGLY +  G           XXXXXXXXXXXXXXXXX     +    VF GPV V GNSG  GA+ L     V FE LVT  DNIM PKLYGD S G A+ + +Y    V+F  G+TATGN AK+GG  Y+                      XXXXXXXXXXXXXXXXXXXXXXXX + CPG    +GE+VFD GET+T+ + +LCY G    GS P DLVEEFDCEAYSA AP +N+ P LV+DT  +KSWDFGSGGGFSC TQ+IVYVTGG ELTVTS+AAS+T+ N   EV G++ L+LDVP LTM+GI+QSQ GGA+FV+ GSS+++++DITF  N++  +Y LG W  RGGAA++SAGTTTF+G A+F GNGQY+ADA+GYEPSNEDGGA+ NSG+MTF ++G F+D+FNXXXXXXXXXXXXXXXXXXX     NNS GVAYT    XXXXXXXXXXX  + ST+LF+G+AIF DNVG   G ALASKG     +DDD +  D+K+TF DKAKFKDNY      PT   +       D +KGGGA+ A G TS++F NTAVFKRNE   GGAI NS  ISF+S+AKLVTADNV +   S C+DILN+D G I IGT  ++G SDSLCERTAA
Sbjct:   38 TTTVGSCSDWP-STITTDTVLELTAAEITCDTNTHVEVLDGATVE-ITSALAATKLNNVKFWVREGNFLCSVPVLDWTSVETVANIHNVQVAGGAAMRIEPGSTATFAEDVTFSACELPVEDFSGGSEGAAIANLGTLLFQGTATFKDTPDGGALYTWGDLTFEKDAIFENNKSINGGDGNGSGAGLYSELDGEVLFMGAAYFIXXXXXXXXXXXXXXXXXXCNLPT----VFKGPVVVRGNSGMLGALYL--NGDVTFEDLVTVEDNIMEPKLYGDRSEG-AIRLGSY--SNVDFQAGITATGNIAKDGGALYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVS-CPGIEFTDGEIVFDGGETYTSASTELCYLGTSTDGSTPTDLVEEFDCEAYSATAPTSNDLPILVIDTQEIKSWDFGSGGGFSCPTQMIVYVTGGGELTVTSSAASTTIDNARFEVSGFSKLILDVPGLTMTGIYQSQAGGALFVDVGSSMEVMHDITFLGNTLAIQYDLGLWEARGGAAVYSAGTTTFYGTADFLGNGQYDADADGYEPSNEDGGAVYNSGSMTFARKGTFLDNFNXXXXXXXXXXXXXXXXXXXXXXXKNNSVGVAYTXXXXXXXXXXXXXXXXXDDSTVLFSGLAIFSDNVGGTAGAALASKG--SDPDDDDASDVDSKVTFEDKAKFKDNYIIPPRRPTSSSEY----VVDEDKGGGALAALGVTSVDFQNTAVFKRNEAVKGGAILNSGSISFLSEAKLVTADNVAS---SACADILNDDSGVINIGTTTLSGGSDSLCERTAA 838          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.88.32 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRB1_ECTSI1.840e-26260.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 5.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 118..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig138contigP-littoralis_Contig138:397803..454897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig138.88.32mRNA_P-littoralis_Contig138.88.32Pylaiella littoralis U1_48mRNAP-littoralis_Contig138 396519..455150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig138.88.32 ID=prot_P-littoralis_Contig138.88.32|Name=mRNA_P-littoralis_Contig138.88.32|organism=Pylaiella littoralis U1_48|type=polypeptide|length=848bp
MKTTVCFAAAACLTAAPLLVKAQMITVSVASCDDLPTSAITQDTVLELTA
TEISCDVNTALEITNGASLQMISSEQGGTTINNIKIWVQDGTFLCDVPNL
EWTSVETVSGIHNFQVRGGAAMRTEEDTSATFVQDVAFIACELPAEDFSG
GSEGAAIANFGSLVFQGNTVFRDTPDAGALYTWGSVTFEKDATFDNNKSN
ANGEGGGSGAGLYIDSFGIATFKGATYFTNNEVIEDRAAGGDGAALFSVS
SSEEAMVFSGPVTVSGNSGAQGAITLWSGQSVIFESLVTFTDNIMAPKLY
GDSSLGGAMWVTNYGGDPVEFLGGVTATGNSAKNGGVFYLSNEASVILSA
PVNISGNEARLAGGVFWMGRGATVTLPVDSYISGNTATICPGFNIVEGEV
VFDEGETFTAGTKDLCYFGNDATGSAPVDLVEEFDCEAYSAIAPVTNEHP
YLVLDTAAVKSWDFGSGGGFSCDTQLIVYVTGGEELTVTSTAASSTMSNV
HLEVIGYTSLVLDVPDLTMSGIFQSQVGGAVFVEDGSSLDIVNDITFQSN
SIQAEYSLGQWVPRGGAAIFSAGTTTFHGRAEFFGNGQYEADANGYEPSN
EDGGALSNSGTMTFMKRGRFIDSFNPNGGNGGAISNFGDLTFNLRAIFTN
NSAGVAYTDDGEPGGGRGGAVWNKGESSTILFNGVAIFKDNVGALGGCAL
ASKGWVFSENDDDLAAGDNKITFADKAKFKDNYCDGEYPTIYDDRDFADW
ADNNKGGGAILAYGATSIEFANTAVFKRNEGPNGGAITNSAEISFISDAK
LVTADNVVTGTLSQCSDILNNDVGTIVIGTEAITGASDSLCERTAAT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence