mRNA_P-littoralis_Contig138.61.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A6H5KSL6_9PHAE (V-SNARE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSL6_9PHAE) HSP 1 Score: 323 bits (829), Expect = 3.370e-101 Identity = 184/242 (76.03%), Postives = 208/242 (85.95%), Query Frame = 1
Query: 109 MQSLGYESGPSRAMQTFQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLAR---SRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKRR 825
M+ G+ESGPSRA+QTFQSHE+ YHRCS+SINR INGIQ N++V+AVGA+SL + L EA+QHV+GMEIE RSMKG+ERRQCQSRANQCRADLKALRRS++QAGQRAQAEELMRR GGG+IGG P ++GG L GLGPDLAQQSLAR SRLSL DSRRVLEETEGIGR VMGDLESQRESLLRSRA+V +T AA AR++L SISR+ELRHRL LY VIA LSAAIV VLY KI+RR
Sbjct: 1 MEPFGFESGPSRAVQTFQSHEESYHRCSMSINRAINGIQLNNLVDAVGATSLPLD-LQEAEQHVKGMEIEARSMKGNERRQCQSRANQCRADLKALRRSIDQAGQRAQAEELMRRSGGGAIGGEPRSFSEGGGDLRGLGPDLAQQSLARRVLSRLSLQDSRRVLEETEGIGRGVMGDLESQRESLLRSRASVRDTGAAAGQARRLLGSISRRELRHRLCLYAVIALLSAAIVFVLYLKIRRR 241
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A835ZAL4_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL4_9STRA) HSP 1 Score: 129 bits (325), Expect = 2.970e-30 Identity = 102/261 (39.08%), Postives = 139/261 (53.26%), Query Frame = 1
Query: 109 MQSLGYESGPSRA----MQTFQSHEDGYHRCSVSINRGINGIQQ-------------------NSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKR 822
MQ L E+ P R+ M F S+ED Y + + IN I+ + +V+A A+ L E E++ RGMEIEVRSM G +R++C ++A Q R+DL ALRR+ +QA RA E LG D ++LAR+ +SL DSRRVL ETE +G V+ DLE QR+SLLR+R N E + AR++LR+I+R++ RHRL LY +IAAL AI VLY K +R
Sbjct: 1 MQPLDVEAPPPRSSTSTMTIFNSYEDSYLQAARGINAHISALWSLRAAANXXXXXXXXXXXXPERIVDA--ATRLFE----ESESLARGMEIEVRSMTGADRKKCGAKAAQYRSDLLALRRAFDQARARAARE---------------------------LGYDGGGRALARTAISLTDSRRVLAETEDVGARVVTDLEGQRQSLLRARDNAREISYDTVEAREVLRAIARRDARHRLALYAIIAALLCAIAFVLYLKFRR 228
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A485K772_9STRA (Aste57867_208 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K772_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 2.660e-11 Identity = 71/236 (30.08%), Postives = 117/236 (49.58%), Query Frame = 1
Query: 127 ESGPSRAM-QTFQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKRRVS 831
+SG + M FQS E+ Y C +IN I+ + Q+ + AS + + + EA + ++ M +E+R R+ Q++ N R +L L+R LE+A ++ +DG + L + + L R+ L S+R+++ETE IG SVM L QRE+LL + V +T A AR++L+ ++++ L H+L L+ VI L AAI+ V Y S
Sbjct: 2 DSGGANGMTDRFQSLEEDYIDCKRTINNSIHDLSQSDQKQV--ASQMAQANVVEAQRCIKLMSVELRGKAPAVRKAMQAKINVYRDELAGLQRDLERALLLSKQNVSSTS-------------SDGTAQYERLISNTGR--LQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHEKVKDTRETAGDARRVLQRMTQRVLTHKLTLWFVIVVLVAAILLVFYHDFIHPSS 220
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A024TJZ2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJZ2_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 6.600e-11 Identity = 71/248 (28.63%), Postives = 113/248 (45.56%), Query Frame = 1
Query: 130 SGPSRAMQTFQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQA----------------GQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKRR 825
SG S FQS E+ Y C +IN I+ + +S+ + AS + + + EA + ++ M +E+R R+ Q++ N R +L+ L+R L++A AQ + L+ L R+ L S+R+++ETE IG SVM L QRE+LL + V +T A AR++L+ +S++ L H+L L+ VI L AIV V Y +R
Sbjct: 4 SGSSALSDRFQSLEEDYIDCKRTINNSIHDL--SSLDQRHVASQMAQANVVEAQRCIKLMSVELRGKTPAVRKVMQAKINVYRDELQGLQRDLDRALLLSKQISSTSXXXXXXXAAQYDRLVAN----------------------------TDRLQRASDQLEQSKRIVQETEQIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRMLTHKLTLWFVILVLIVAIVLVFYHDFIKR 221
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: W4GBV3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBV3_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 1.230e-10 Identity = 69/230 (30.00%), Postives = 111/230 (48.26%), Query Frame = 1
Query: 151 QTFQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQA----GQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKRRV 828
+ FQS E+ Y C +IN I+ + + AS + + + EA + ++ M +E+R R+ Q++ N R +L+ L+R ++A Q A A A+G + L + + L R+ L S+R+++ETE IG SVM L QRE+LL + V +T A AR++L+ +S++ L H+L L+ VI L AI V Y RR
Sbjct: 11 ERFQSLEEDYIDCKRTINNSIHDLSSSDQRHV--ASQMAQANIVEAQRCMKLMSVELRGKVPAMRKAMQAKINVYRDELQGLQRDFDRALLLSKQNASASSSSSS-------------ANGVAQYDRLIANTDR--LQRAXXXLEQSKRIVQETEHIGISVMDTLAQQRETLLSAHDKVKDTRETAGDARRVLQRMSQRVLTHKLTLWFVIVVLVVAIALVFYHNFIRRA 223
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A7S1C7L7_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C7L7_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.240e-9 Identity = 59/179 (32.96%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 268 ENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVL 804
+ + +A+ V+ ME+E RS+ E+R+ R RA+L A R LE+A R + LM G ++ + S G + + A + RS L ++RR + ETE +G +MG+L SQRE+LLR+ V ET AR++L +I R+ ++ L++VI L AI V+
Sbjct: 50 KRLVRDAEGTVQAMELEARSVAPSEKRRLTGRIRTYRAELSAARTDLERAQTRGDRDALMAGGSRDAV------SRESASQRGRI--EEATARMDRSTAVLEETRRTVMETEEVGVGIMGNLHSQRETLLRAHDKVKETNRLTTRARRVLNNIKRRACYNQALLWVVILFLLGAIGAVV 220
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A7S2H1J4_9DINO (Hypothetical protein n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2H1J4_9DINO) HSP 1 Score: 67.0 bits (162), Expect = 6.890e-9 Identity = 58/179 (32.40%), Postives = 86/179 (48.04%), Query Frame = 1
Query: 286 ADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKR 822
ADQ +R ME+E R++ + R RA+ L++++E A Q A+ EL+ G G D S+L G L + R SL E E IG VM DL QRE +LR+RANV E A A+++L SI R+ +R +Y+V A + ++ +Y K+
Sbjct: 28 ADQALRQMEMEARTLPPEARSHLDPMIKAYRAEFSGLQKAVEAARQAAERGELLEDGSSGKTAKDRDRLVDSTSILTGASRQLGEAH----RQSL--------EAEQIGLDVMSDLRQQREMILRTRANVGEIGENTALAKRLLSSIGRRAAANRYLVYVVAALMVIMMIVAVYFMSKQ 194
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A150GHM9_GONPE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GHM9_GONPE) HSP 1 Score: 66.6 bits (161), Expect = 1.520e-8 Identity = 66/234 (28.21%), Postives = 110/234 (47.01%), Query Frame = 1
Query: 157 FQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQS-------------LARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIK 819
F +E+ Y S I+R IN S S ++ + EAD ++ M++E RS+ + R Q++ + +ADL +L+ L +A A E R + LG LG D A S L +S L +++L ETE +G ++ +L +QRE+++ SR + + AR++L ++SR L+++L L VIA L AI+ ++Y K K
Sbjct: 8 FSQYENEYCNKSTDISRKINTASTLSGDARRKKLSEVDVDIREADNIIKKMDMEARSVAPERSRNLQNKVKEYKADLASLKEQLTKARSTAGDFESAR------------------AELG-LGMDYASSSQAQRDRMLSGTAKLEQSNERLQTGKKLLAETEELGTGILANLAAQRETIIHSRDTLHGADDNISKARKILSNMSRVMLQNKLILIGVIAFLLTAIILIIYFKAK 222
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: UPI001884A58A (vesicle transport through interaction with t-SNAREs homolog 1A-like isoform X1 n=2 Tax=Pollicipes pollicipes TaxID=41117 RepID=UPI001884A58A) HSP 1 Score: 64.3 bits (155), Expect = 9.290e-8 Identity = 63/224 (28.12%), Postives = 102/224 (45.54%), Query Frame = 1
Query: 157 FQSHEDGYHRCSVSINRGINGIQQNSVV-EAV-GASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDLAQQSLARSRLSLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKR 822
F HE Y S I IN IQ +S+ +AV G + E + EA + + ME+E R + R+ +R A+L+ L + + R E++ G A + L D RL + R+ E+E IG V+GDL SQRE+LLR+R+ + +T + ++L + + +++R+ L LV A L AA+ +Y+ R
Sbjct: 11 FTEHEHLYSVLSAEITDKINIIQGHSITGDAVAGPCAEAERLMAEAHELMEQMELEAREQPDELRQALANRVRSYSAELRRLNKEYQNIKHRVCRAEVLEGG------------ARSATAAERLMDDTELMERTGGRLD--EGYRMCLESEAIGAEVLGDLSSQRETLLRTRSRLRDTDSELGRSSRLLTGMMHRAMQNRVLLLLVAAVLLAAVGYAVYALAVR 220
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Match: A0A0D2UHB8_CAPO3 (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UHB8_CAPO3) HSP 1 Score: 64.3 bits (155), Expect = 1.140e-7 Identity = 59/247 (23.89%), Postives = 125/247 (50.61%), Query Frame = 1
Query: 145 AMQTFQSHEDGYHRCSVSINRGIN-------GIQQNSVVEAVGASSLLENFLPEADQHVRGMEIEVRSMKGDERRQCQSRANQCRADLKALRRSLEQAGQRAQAEELMRRGGGGSIGGGPTGHADGGSVLGGLGPDL-AQQSLARSRL------------SLLDSRRVLEETEGIGRSVMGDLESQRESLLRSRANVSETAGAAATARQMLRSISRKELRHRLFLYLVIAALSAAIVCVLYSKIKRR 825
+ + F+++E + S SI + ++ G Q+ + ++AV E + +AD+ V+GME+E+++ R + Q++ + +L +++ L ++L+ GGGS G P G + D+ AQ + RSR+ L +++RV E+E IG+ ++G+L +QRE+++R R + ET +R++L + + +++RL +Y+++ L + V+Y + ++
Sbjct: 3 SSELFENYEFEFTNISASITKKLSSQIPNFTGEQRKAAIKAV------EKEIVQADEIVQGMELELKNAPAQFRPRLQTKLKTYQNELARIKKELRGLTNSGNRDDLL---GGGSGAGSPAGFGGRSAYQ-----DVEAQSNDQRSRILDSHDRLNRTTGRLDNAQRVAAESEAIGQDILGELGTQRETIVRVRGRLHETDDNLTRSRRILNGMYYRIIQNRLIMYIIVLVLMGILGIVVYMRFFKK 235 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.61.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig138.61.1 >prot_P-littoralis_Contig138.61.1 ID=prot_P-littoralis_Contig138.61.1|Name=mRNA_P-littoralis_Contig138.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=242bp MQSLGYESGPSRAMQTFQSHEDGYHRCSVSINRGINGIQQNSVVEAVGASback to top mRNA from alignment at P-littoralis_Contig138:304735..313802+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig138.61.1 ID=mRNA_P-littoralis_Contig138.61.1|Name=mRNA_P-littoralis_Contig138.61.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9068bp|location=Sequence derived from alignment at P-littoralis_Contig138:304735..313802+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig138:304735..313802+ >mRNA_P-littoralis_Contig138.61.1 ID=mRNA_P-littoralis_Contig138.61.1|Name=mRNA_P-littoralis_Contig138.61.1|organism=Pylaiella littoralis U1_48|type=CDS|length=726bp|location=Sequence derived from alignment at P-littoralis_Contig138:304735..313802+ (Pylaiella littoralis U1_48)back to top |