prot_P-littoralis_Contig138.60.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig138.60.1
Unique Nameprot_P-littoralis_Contig138.60.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length217
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig138.60.1 vs. uniprot
Match: D8LHK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHK8_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 3.060e-17
Identity = 83/145 (57.24%), Postives = 95/145 (65.52%), Query Frame = 0 
Query:    1 MEEGIRTPSISRSASVEQLPGAVDHHQQQQHSRNEVKVVKEAIILVHDARRFGVSERGLWHLNRLHSRAVQPRTRPNTSSTPAAAGSVAGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWDIGDGDLTLLDANVTVS 145
            ME+GIR+P+ SRS S  +   +VD       +R EVKV++E I+LVHDARRFGVSERGLWHL+RLHSRA QP TR                S  XXXXXXXXXXXXXXXXXXXXXX           +DI D DLTLLDAN+ VS
Sbjct:    1 MEDGIRSPAFSRSTSAGEQ-ASVDE------TRQEVKVIQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQPLTR----------------SAAXXXXXXXXXXXXXXXXXXXXXXSPPSPGHPAGVFDIDDDDLTLLDANLIVS 122
[Close]
BLAST of mRNA_P-littoralis_Contig138.60.1 vs. uniprot
Match: A0A6H5KTQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ7_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 2.420e-10
Identity = 52/108 (48.15%), Postives = 59/108 (54.63%), Query Frame = 0 
Query:   38 VVKEAIILVHDARRFGVSERGLWHLNRLHSRAVQPRTRPNTSSTPAAAGSVAGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAWDIGDGDLTLLDANVTVS 145
            V++E I+LVHDARRFGVSERGLWHL+RLHSRA QP  R   +                             XXXXXXXX           +DIGD DLTLLDAN+ VS
Sbjct:   30 VIQEGIVLVHDARRFGVSERGLWHLDRLHSRAFQPLARQAVAD-----------KRLYMKLILCKLRAGSGXXXXXXXXSPPAPGHPAGVFDIGDDDLTLLDANLIVS 126
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.60.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHK8_ECTSI3.060e-1757.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KTQ7_9PHAE2.420e-1048.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..176
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..102
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig138contigP-littoralis_Contig138:299696..304528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig138.60.1mRNA_P-littoralis_Contig138.60.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig138 299696..304554 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig138.60.1 ID=prot_P-littoralis_Contig138.60.1|Name=mRNA_P-littoralis_Contig138.60.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=217bp
MEEGIRTPSISRSASVEQLPGAVDHHQQQQHSRNEVKVVKEAIILVHDAR
RFGVSERGLWHLNRLHSRAVQPRTRPNTSSTPAAAGSVAGGSASSSSGDS
GTPSPSPPRPSPPTAAAAAAAAAAVAAWDIGDGDLTLLDANVTVSGGRSN
RRALPLLSPADQPPTPPTTQSGSRRTVTAATAAATTRLLRNNSGSSCNNA
TTTSEWAGSSCGGGGHG
back to top