prot_P-littoralis_Contig138.45.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig138.45.2
Unique Nameprot_P-littoralis_Contig138.45.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length150
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig138.45.2 vs. uniprot
Match: D8LHK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK6_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.530e-25
Identity = 58/78 (74.36%), Postives = 64/78 (82.05%), Query Frame = 0 
Query:   72 GLSSVHRRSV--AATESFMMTTKDFLANGSSPTTSNCGLKLYNDLTRGTYEACETYGNDKLVGAAIPDFAVTFVEVYA 147
            GL SVH++     ATESFMMTTKDFLA GSSP TSNCGLKLYNDLTRG+ +ACETYGN++LVG    DFAVT VEVYA
Sbjct:  601 GLGSVHKKQPPSVATESFMMTTKDFLAMGSSPVTSNCGLKLYNDLTRGSSDACETYGNERLVGPTTADFAVTCVEVYA 678
[Close]
BLAST of mRNA_P-littoralis_Contig138.45.2 vs. uniprot
Match: A0A7S2K1S0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1S0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 3.720e-5
Identity = 30/62 (48.39%), Postives = 40/62 (64.52%), Query Frame = 0 
Query:   85 ESFMMTTKDFLANGSSPTTSNCGLKLYNDLTRGTYEACETYGNDKLVGAAIPDFAVTFVEVY 146
            E FMM+T ++++ G S   S CGL+L  DLTRG+ +   T+GND L G  + DF V  VEVY
Sbjct:  501 EQFMMSTGNYISMGGSHDGS-CGLRLNEDLTRGSSDHSLTFGNDPLAGNDLLDFDVGLVEVY 561
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.45.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHK6_ECTSI1.530e-2574.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2K1S0_9STRA3.720e-548.39Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006571TLDc domainPFAMPF07534TLDcoord: 85..148
e-value: 1.5E-5
score: 25.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig138contigP-littoralis_Contig138:221295..222810 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig138.45.2mRNA_P-littoralis_Contig138.45.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig138 220737..224874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig138.45.2 ID=prot_P-littoralis_Contig138.45.2|Name=mRNA_P-littoralis_Contig138.45.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=150bp
MEAVNGEGGGTGEDGGLSDPAGSLAAAVAAGTGLAFSTKVSSHPALPSAR
RPSSNGQSPSAARRNAALRVVGLSSVHRRSVAATESFMMTTKDFLANGSS
PTTSNCGLKLYNDLTRGTYEACETYGNDKLVGAAIPDFAVTFVEVYAVE*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006571TLDc_dom