mRNA_P-littoralis_Contig138.44.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: D7FP30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP30_ECTSI) HSP 1 Score: 246 bits (627), Expect = 9.670e-73 Identity = 148/297 (49.83%), Postives = 175/297 (58.92%), Query Frame = 3
Query: 291 MHFSPRLITTMALAAP--------RLALALRVRGMTTXXXXXXXXXXXXXXXXXXXXXXXXXXGGVGGD--TCSIVSVACHFLEDKKRLIECLSPADYSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQGTAELRAMRVAPTFMVVAPGIDGGR-EEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRKQEEE 1148
MHFSPRL+T++ LAAP R A + R +T G+ GD C +VS A FL+ KKRL++CLSPADY+ +DPA+GASVGGH+RH LDHFSKCL AA VTIRYD R RGG+IE DPAAAS+ IS LLQQL++LP LRA RVAP FM+ G D +E+EFESNLERELFFCCHHGTHHDAMIQLILR MGEKGE ALSQAG+ FGVAPST+DF +K+ ++
Sbjct: 1 MHFSPRLVTSLRLAAPPFRRRCFLRTAPSSRASSSSTSSNADD---------------------GIAGDGGRC-VVSAAMRFLQGKKRLVDCLSPADYAHMDPAIGASVGGHLRHTLDHFSKCLQAAQQQPAPDEDAVPTTTP--------------------------VTIRYDHRARGGNIETDPAAASRSISSLLQQLQSLPTARY-LRAKRVAPMFMLGLGGDDNNSTKEYEFESNLERELFFCCHHGTHHDAMIQLILRGMGEKGENALSQAGEAFGVAPSTIDFLKKRHQK 248
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A6H5JPJ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ6_9PHAE) HSP 1 Score: 243 bits (621), Expect = 8.260e-72 Identity = 133/228 (58.33%), Postives = 155/228 (67.98%), Query Frame = 3
Query: 468 GDTCSIVSVACHFLEDKKRLIECLSPADYSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQGTAELRAMRVAPTFMVVAPGIDGG-REEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRKQEEE 1148
G TC +VS A FL+ KKRL++CLSPADY+ +DPA GASVGGH+RH LDHFSKCL AA VTIRYD RVRGG+IE DPAAAS+ IS LLQQL++LP+ LRA RVAP FM+ G D G +EE+ FESNLERELFFCCHHGTHHDAMI+LILR MGEKGE ALSQAG+GFGVAPST+DF +K+ ++
Sbjct: 53 GGTC-VVSAAMRFLQGKKRLVDCLSPADYARMDPATGASVGGHLRHTLDHFSKCLQAAQQQPAPDEDAVPTTTP--------------------------VTIRYDHRVRGGTIETDPAAASRSISSLLQQLQSLPRADY-LRAKRVAPMFMLGLGGGDNGIKEEYGFESNLERELFFCCHHGTHHDAMIRLILRGMGEKGENALSQAGEGFGVAPSTIDFLKKRHKK 252
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A7S1U1W9_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1W9_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 4.120e-15 Identity = 71/222 (31.98%), Postives = 93/222 (41.89%), Query Frame = 3
Query: 480 SIVSVACHFLEDKKRLIECLSPAD---YSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQ-GTAELRAMRVAPTFMVVAPGIDGGREEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRR 1133
+++S A L +K L+ L Y+AV P+ GASVG HMRH+L HF+ L + + YD+R RG +IE D A I L + +P+ G E RV FM+ G+ EH+FES LERELFF HH HHDA I IL+ G + FG APST F +
Sbjct: 100 NVLSAAAFSLRNKGELLASLQERRAEAYTAVSPSQGASVGQHMRHSLQHFTALLKREGGAV----------------------------------------VAYDKRERGNAIETDLEEARATIRDLEATIGGIPEDGLGE----RVRVRFMLNGDGL-----EHDFESTLERELFFVVHHSVHHDATIGTILKEQG-------LPPPETFGRAPSTQAFEK 265
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A2R5GC69_9STRA (FK506-binding protein 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GC69_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.440e-13 Identity = 57/192 (29.69%), Postives = 89/192 (46.35%), Query Frame = 3
Query: 552 YSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQGTAELRAMRVAPTFMVVAPGIDGGREEHEF--ESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTV 1121
Y+ P VG+++GGH+RHALDH+ + L A + + YD R+RGG +E D ++A + I ++L ++ T E+ A + F + G ++ +F ES REL+F HH HH AMI+LI++ EK +A + + FG+APSTV
Sbjct: 32 YATKCPVVGSTIGGHVRHALDHYDRALDGILSKAKTSSS--------------------------------LSLVDYDTRLRGGDVEKDLSSAVEAILNCSERLGSI---TEEMLARPMQVQFNL------SGNDDSKFLFESYAARELWFAAHHSIHHQAMIKLIIQCHDEKKTLAQALP-RDFGMAPSTV 181
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A482SB45_9ARCH (DinB family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SB45_9ARCH) HSP 1 Score: 68.6 bits (166), Expect = 2.760e-9 Identity = 61/231 (26.41%), Postives = 94/231 (40.69%), Query Frame = 3
Query: 465 GGDTCSIVSVACHFLEDKKRLIECLSPADYSAVDPAV-GASVGGHMRHALDHFSKCLTAAH-PSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALP-QGTAELRAMRVAPTFMVVAPGIDGGREEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRKQEEE 1148
G D I+S A L+ K +++ L+ DY + + +S+GGH+RH++DH+ +TAA PS+ YD R R +E + AA + L ++L L + E+ + TF + S + REL F HHG HH +MI+L+L+ MG A G+APSTV ++ EE
Sbjct: 43 GADKQLILSQAHSMLQQKLLVLDLLTDEDYCKKNVDIFNSSIGGHLRHSMDHYEALVTAASSPSSFAD---------------------------------------YDSRSRNTLVETNRKAAKDSVLALQKKLEKLDLEKNIEVSFIGETKTFT-----------SFKLTSTVARELSFASHHGIHHMSMIKLLLQGMGYS-----LPAEANVGIAPSTVLHHKQHPEE 218
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: F0W0Z2_9STRA (Uncharacterized protein AlNc14C5G772 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0Z2_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 4.360e-9 Identity = 58/216 (26.85%), Postives = 90/216 (41.67%), Query Frame = 3
Query: 507 LEDKKRLIECLSPADYSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQGTAELRAMR--VAPTFMVVAPGIDGGREEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRKQEEE 1148
L ++ LI+ L+ Y P + +S+G H+RH+LDHF+K L ++ +RYD R R E +A + + + + + L E+ M+ V +FM+ A G +E EF S L RE+ F HH HH+A I+ IL+ I Q FG APST +F + +E+
Sbjct: 36 LFQEETLIKALTDEQYQFQCPWIKSSIGQHVRHSLDHFTKPLETSN-----------------------------------------TVVRYDLRDRNTDAENRVKSAEKALLSIRKSVENL-----EMDQMKKSVTVSFMLSADG-----KECEFLSTLGREMAFAAHHCIHHNAAIKQILQ---RHFPICFDQLPSDFGTAPSTTNFHKMTQEK 197
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A3M1GTS8_9BACT (DinB family protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3M1GTS8_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 8.410e-9 Identity = 61/208 (29.33%), Postives = 84/208 (40.38%), Query Frame = 3
Query: 522 RLIECLSPADYSAVDPA-VGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQGTAELRAMRVAPTFMVVAPGID-GGREEHEF-ESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRK 1136
RL+ + + A PA +GAS+GGH+RH +DH+ L A A I YD R R +IE DP A + AL + + EL + V +D GG EE + S++ REL F H HH A+I +I R+ G E FGVAPST+ +RR+
Sbjct: 18 RLVAPMPATLFDAKSPASLGASIGGHLRHVIDHYRCFLRGAETGA----------------------------------------IDYDARERSPAIESDPEVA----------VAALREVSDELGQLAVEVLDAAARVRMDTGGAEERPWTRSSVRRELQFLLSHTVHHFALIAMICRARGHAVEPE-------FGVAPSTLRYRRQ 168
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A6U3Y5M0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3Y5M0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.130e-8 Identity = 53/195 (27.18%), Postives = 76/195 (38.97%), Query Frame = 3
Query: 567 PAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQQLRALPQ----GTAELRAMRVAPTFMVVAPGIDGGREEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRRKQ 1139
P VGAS+G H RH++DH A + + YD RVRGG++E D + + +S + ++L G E+ + +A E S +EREL FC HH HH AM+++I E L + GFG APST+ F +KQ
Sbjct: 40 PIVGASIGQHYRHSMDHVELAALVASSAQDASMQQQQLGD-----------------------------LHYDLRVRGGTLEKDLVESRKRLSDVSDVFKSLSATIDAGNTEITTATPVTVYFNLAAD---DAAEIGLPSTVERELGFCAHHAIHHLAMVRIICLQTVGLNEAELPE---GFGRAPSTILFDKKQ 199
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A7S3PV53_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PV53_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 1.900e-8 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = 3
Query: 765 VVTIRYDQRVRGGSIEMDPAAASQFISLL---LQQLRALPQGTAELRAMRVAPTFMVVAPGIDGGREEHEFESNLERELFFCCHHGTHHDAMIQLIL-RSMGEKGEIALSQAGKGFGVAPSTVDFR 1130
+VT+ YD RVRGG++E D A++ I L L++++A+ + V +FM+ + E + +S + REL F HH HH AM+++I ++G + + + FG APSTV F+
Sbjct: 21 IVTLNYDLRVRGGTLEKDVNEATKRIDSLWQVLEEMKAIQNENENIPDNEVNASFMLSS----NSGTEFKLKSTIGRELGFAAHHAIHHLAMVKIIATHTLGMEED----EFHPDFGKAPSTVQFK 138
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Match: A0A7S4T454_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T454_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 2.100e-8 Identity = 55/214 (25.70%), Postives = 85/214 (39.72%), Query Frame = 3
Query: 513 DKKRLIECLSPADYSAVDPAVGASVGGHMRHALDHFSKCLTAAHPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVTIRYDQRVRGGSIEMDPAAASQFISLLLQ--QLRALPQGTAELRAMRVAPTF--MVVAPGID---GGREEHEFESNLERELFFCCHHGTHHDAMIQLILRSMGEKGEIALSQAGKGFGVAPSTVDFRR 1133
DK R++ + + P +GAS+G H RH++DH A + YD RVRGG++E D + + I ++ Q L Q T E + P ++P D GG +E S + REL FC HH HH AM+++I + +++ + FG APST+ + R
Sbjct: 34 DKARVV-------FRSACPLIGASIGQHYRHSMDHIELAALVASTGTAEGINANNSENISTPP------------------------LHYDLRVRGGTLEHDMDESRKRILSVMDIFQDLELKQQTEESNVITNCPVVAHFYLSPSEDEKGGGSQEIGLTSTIGRELGFCAHHAIHHMAMVKIIALNFAG---LSVDELPPDFGKAPSTIIYDR 213 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.44.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig138.44.1 >prot_P-littoralis_Contig138.44.1 ID=prot_P-littoralis_Contig138.44.1|Name=mRNA_P-littoralis_Contig138.44.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp MMMHFSPRLITTMALAAPRLALALRVRGMTTTAAATDTTIGGRRRSSSSSback to top mRNA from alignment at P-littoralis_Contig138:217305..219507+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig138.44.1 ID=mRNA_P-littoralis_Contig138.44.1|Name=mRNA_P-littoralis_Contig138.44.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=2203bp|location=Sequence derived from alignment at P-littoralis_Contig138:217305..219507+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig138:217305..219507+ >mRNA_P-littoralis_Contig138.44.1 ID=mRNA_P-littoralis_Contig138.44.1|Name=mRNA_P-littoralis_Contig138.44.1|organism=Pylaiella littoralis U1_48|type=CDS|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig138:217305..219507+ (Pylaiella littoralis U1_48)back to top |