prot_P-littoralis_Contig138.19.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig138.19.1
Unique Nameprot_P-littoralis_Contig138.19.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length423
Homology
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: A0A6H5JLS0_9PHAE (Rhomboid domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLS0_9PHAE)

HSP 1 Score: 399 bits (1025), Expect = 1.480e-134
Identity = 228/344 (66.28%), Postives = 262/344 (76.16%), Query Frame = 0
Query:   86 PLFPSSTGSTGGLTAAAA---AAVTARQQCSLARSAPIGLLGKSSSSYRACNSSWACSLTKRGAGVGRARTAGLSTRFRA---PPRVAGTTKGDSRGSIGTAGIGSGTRSFSSFLPRGGS-TDSMIVYGMVGLNVAGTIAMYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQTGVAGALYLGATLYQVVTNGDAVPLLGGPTEEIWRTLGAVAAGVLVALSSRGRGGGRYKFIQRF 422
            P  P   G++  +  +AA   +A  A  Q SLARS P  LLG+S + + AC SSW  S         RA     S +  +   PP  +   +G  RG      +G+G R+ SSFLPRGG  +DSMIVYG+VGLNVAGT+A+YLH T+G GGP +  NFMVST TTL  GRLHTL TSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGR+QFLALYLLGGAF+QLCQV GP IA RLGLP+VLQVDPY+ S+GGSGA +A+LAWYCASFP SQIIL+VVPVQTGVAGALYLGATLYQVV+NG  VP LGGPT+EIWRTLGA AAGV+VAL+SRGRGGGRYKFIQR+
Sbjct:   21 PRLPLGCGNSPAMATSAARTTSAAVAIGQRSLARS-PTVLLGRSGAKH-AC-SSWVRSRASPPWSFARAGRLPRSLQHGSSVVPPCASWANQGGRRG------VGAGNRALSSFLPRGGRYSDSMIVYGVVGLNVAGTVAIYLHETQGAGGPFLFGNFMVSTYTTLMQGRLHTLLTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVVVALASRGRGGGRYKFIQRY 355          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: D8LNG3_ECTSI (Rhomboid domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG3_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.070e-125
Identity = 181/220 (82.27%), Postives = 202/220 (91.82%), Query Frame = 0
Query:  203 MIVYGMVGLNVAGTIAMYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQTGVAGALYLGATLYQVVTNGDAVPLLGGPTEEIWRTLGAVAAGVLVALSSRGRGGGRYKFIQRF 422
            M++YG+VGLNVAGT+AMYL+ ++G GGP +  NFMVST TTL  GRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGR+QFLALYLLGGAF+QLCQV GP IA RLGLP+VLQVDPY+ S+GGSGA +A+LAWYCASFP SQIIL+VVPVQTGVAGALYLGATLYQVV+NG  VP LGGPT+EIWRTLGA AAGV+VAL+SRGRGGGRYKFIQR+
Sbjct:    1 MVIYGVVGLNVAGTVAMYLYESQGTGGPFLFGNFMVSTYTTLMQGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRRQFLALYLLGGAFSQLCQVAGPGIASRLGLPSVLQVDPYYFSSGGSGATLAVLAWYCASFPSSQIILLVVPVQTGVAGALYLGATLYQVVSNGAGVPFLGGPTQEIWRTLGAAAAGVMVALASRGRGGGRYKFIQRY 220          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: A0A8K0JHW0_9TREE (Uncharacterized protein n=2 Tax=Filobasidium floriforme TaxID=5210 RepID=A0A8K0JHW0_9TREE)

HSP 1 Score: 82.4 bits (202), Expect = 1.240e-13
Identity = 76/226 (33.63%), Postives = 105/226 (46.46%), Query Frame = 0
Query:  204 IVYGMVGLNVAGTI------AMYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLC-----QVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILM-VVPVQTGVAGALYLGATLYQVVTNGDAVPLLGGPTEEIWRTLGAVAAGVLVALSSRGRGGGRYK 417
            ++YG++G NV   +      A +    +      M+ NF+VS A  L  GRLHTL T  FSHSN  + A+    +Y +GP     LG   FL LYL GG  + +      +++  N ++  G            S G SGAI A LA+Y A FP +Q +L  VVP+    A        LY  + +  AV    G        +G + AGV  A  SRGRGG R +
Sbjct:  146 VIYGIIGANVGIFLVWQYAQASWTRFRDPTLYRWMSQNFIVSEAN-LAAGRLHTLLTCCFSHSNTGHIALNMLGLYFIGPATAGLLGPASFLGLYLGGGIVSSMVSLAWHRMMSSNRSKSHG------------SEGASGAIYASLAYYAAMFPQAQFLLFFVVPLPAWAAVGGIFAYDLYSSIRSPMAVTDSAGH-------VGGLLAGVAYAFRSRGRGGPRMR 351          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: E6QYZ2_CRYGW (Rhomboid domain-containing protein n=3 Tax=Cryptococcus gattii species complex TaxID=1884637 RepID=E6QYZ2_CRYGW)

HSP 1 Score: 65.1 bits (157), Expect = 5.000e-8
Identity = 55/181 (30.39%), Postives = 85/181 (46.96%), Query Frame = 0
Query:  204 IVYGMVGLNVAGTIAMY--LHTTEGMGGPHMAL----NFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVV---PVQTGVAGALYLGATLYQVV 375
            +VYG++G+N A  +     L + +    P +      NF+++     + GR+ TL TS FSHSN  +  +    +Y L P A   +G   FL LYL  G F+ L  +     ++            ++ S G SGAI A LA+Y A FP SQ++L  V   PV   + G   +    Y ++
Sbjct:  126 LVYGLIGINGAVFLLWQYALSSAQRFRDPSLLYFLRNNFILNEVNVFS-GRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVSLGYHRFSQHR----------WWGSEGASGAIYACLAYYGALFPNSQVLLFFVIPMPVWVAIGGIFAVSLFFYYLL 295          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: Q5KLG1_CRYNJ (Rhomboid domain-containing protein n=4 Tax=Cryptococcus neoformans TaxID=5207 RepID=Q5KLG1_CRYNJ)

HSP 1 Score: 65.1 bits (157), Expect = 6.090e-8
Identity = 54/166 (32.53%), Postives = 82/166 (49.40%), Query Frame = 0
Query:  204 IVYGMVGLNVAGTIAMY--LHTTEGMGGPHMAL----NFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILM-VVPVQTGVA 362
            +VYG++G+N A  +     L + +    P +      NF+++     + GR+ TL TS FSHSN  +  +    +Y L P A   +G   FL LYL  G F+ L  +     +R            ++ S G SGAI A LA+Y A FP SQ+++  V+P+   VA
Sbjct:  126 LVYGLIGINGAVFLLWQYALSSAQRFRDPSLLYFLRNNFILNEVNVFS-GRIWTLVTSAFSHSNGTHIFVNCLGLYFLAPAAASIMGSASFLGLYLGAGVFSSLVSLGYHRFSRHR----------WWGSEGASGAIYACLAYYGALFPNSQVLMFFVIPMPVWVA 280          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: UPI00143D21A1 (presenilins-associated rhomboid-like protein, mitochondrial isoform X1 n=2 Tax=Belonocnema kinseyi TaxID=2817044 RepID=UPI00143D21A1)

HSP 1 Score: 62.4 bits (150), Expect = 4.300e-7
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 0
Query:  255 SNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQT 359
            S FSH + W+ AI  Y+++ +   A+Q LG +QF+A+YL+ G       VLG N A  +    + Q      S G SG+IM +L + C  FP +++ L+ +P+ T
Sbjct:  160 STFSHYSFWHMAINMYVLHNISTPAVQTLGAEQFVAMYLISG-------VLG-NFASHMYKVYLNQAGQ---SLGASGSIMGVLGYTCTQFPSAELCLIFLPMFT 253          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: A0A7S3ELK7_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELK7_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 8.910e-7
Identity = 46/165 (27.88%), Postives = 77/165 (46.67%), Query Frame = 0
Query:  193 FLPRGGSTDSMIVYGMVGLNVAGTIAMYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPV 357
            F  R  +T+   +  ++G+N    +A  +          M  +F  S   ++ +GRLHTLFTSN SH +  +  I   ++Y +G   IQ +   +F  LY  GG  + +  V+   + R    P V        S G SG++MA+L  +   FP  + I++  P+
Sbjct:   36 FKRRSKTTEGRTILTLLGMNSCIFLAWRISKKRPNASIFMVQHFTCS-RDSMQIGRLHTLFTSNLSHYDPLHFTINMVVLYNVGNEVIQIINPSRFTQLYFFGGFSSSVTSVMLKRVRRS---PRV--------SLGASGSVMAMLFMFAQLFPERKAIIVGKPI 188          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: U4UTS1_DENPD (Rhomboid domain-containing protein n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=U4UTS1_DENPD)

HSP 1 Score: 60.1 bits (144), Expect = 1.730e-6
Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 0
Query:  219 MYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQTGVAG 363
            M  + T   G PH  L  ++ST                FSH + ++     Y++++    A+Q LG++QFL LYL  G  +     L   + ++ GL           S G SG+IMAILA+ C  +P +++ ++++P  T  AG
Sbjct:   94 MLNYFTSNPGSPHQCLPMILST----------------FSHYSGFHLLANMYVLHSFSTGAVQSLGKEQFLGLYLSAGVISSFTSYLYKILRKQPGL-----------SLGASGSIMAILAYVCVQYPETKLGIILLPFFTFSAG 211          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: UPI00094F2808 (presenilins-associated rhomboid-like protein, mitochondrial n=1 Tax=Dendroctonus ponderosae TaxID=77166 RepID=UPI00094F2808)

HSP 1 Score: 60.1 bits (144), Expect = 2.820e-6
Identity = 42/145 (28.97%), Postives = 69/145 (47.59%), Query Frame = 0
Query:  219 MYLHTTEGMGGPHMALNFMVSTATTLNMGRLHTLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQTGVAG 363
            M  + T   G PH  L  ++ST                FSH + ++     Y++++    A+Q LG++QFL LYL  G  +     L   + ++ GL           S G SG+IMAILA+ C  +P +++ ++++P  T  AG
Sbjct:  169 MLNYFTSNPGSPHQCLPMILST----------------FSHYSGFHLLANMYVLHSFSTGAVQSLGKEQFLGLYLSAGVISSFTSYLYKILRKQPGL-----------SLGASGSIMAILAYVCVQYPETKLGIILLPFFTFSAG 286          
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Match: UPI0018A6F38F (LOW QUALITY PROTEIN: presenilins-associated rhomboid-like protein, mitochondrial n=3 Tax=Penaeus TaxID=133894 RepID=UPI0018A6F38F)

HSP 1 Score: 59.3 bits (142), Expect = 5.930e-6
Identity = 49/161 (30.43%), Postives = 76/161 (47.20%), Query Frame = 0
Query:  252 LFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQLCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQIILMVVPVQTGVAGALYLGATLYQVVTNGDAVPLLGGPTEEIWRT------LGAVAAGVLVAL 406
            +F S FSH   ++ A+  Y++++        LG++QF+A+YL GG  + L   +   +A R   P          S G SGAIMA+L ++C   P +Q+ ++ +P      G  +   T  + V   DAV +  G     WRT      LG    G+L AL
Sbjct:  222 MFLSTFSHFAFFHLAMNMYVLHSFSTGVCASLGKEQFVAMYLSGGVMSSLASHVF-KVAMRCPGP----------SLGASGAIMALLGYFCTQNPNAQLGIVFIP------GISFSADTALKAVMCLDAVGIALG-----WRTFDHAAHLGGALFGLLYAL 360          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.19.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5JLS0_9PHAE1.480e-13466.28Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
D8LNG3_ECTSI1.070e-12582.27Rhomboid domain-containing protein n=1 Tax=Ectocar... [more]
A0A8K0JHW0_9TREE1.240e-1333.63Uncharacterized protein n=2 Tax=Filobasidium flori... [more]
E6QYZ2_CRYGW5.000e-830.39Rhomboid domain-containing protein n=3 Tax=Cryptoc... [more]
Q5KLG1_CRYNJ6.090e-832.53Rhomboid domain-containing protein n=4 Tax=Cryptoc... [more]
UPI00143D21A14.300e-735.24presenilins-associated rhomboid-like protein, mito... [more]
A0A7S3ELK7_9RHOD8.910e-727.88Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
U4UTS1_DENPD1.730e-628.97Rhomboid domain-containing protein n=1 Tax=Dendroc... [more]
UPI00094F28082.820e-628.97presenilins-associated rhomboid-like protein, mito... [more]
UPI0018A6F38F5.930e-630.43LOW QUALITY PROTEIN: presenilins-associated rhombo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 247..375
e-value: 7.5E-12
score: 45.5
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 200..408
e-value: 3.6E-18
score: 68.0
IPR035952Rhomboid-like superfamilySUPERFAMILY144091Rhomboid-likecoord: 204..405
NoneNo IPR availablePANTHERPTHR43731RHOMBOID PROTEASEcoord: 47..405

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig138contigP-littoralis_Contig138:92176..99081 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig138.19.1mRNA_P-littoralis_Contig138.19.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig138 91100..99085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig138.19.1 ID=prot_P-littoralis_Contig138.19.1|Name=mRNA_P-littoralis_Contig138.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=423bp
MVQTQECRHCTRKVEGGVVRRIVSFTIDKSCRSPQATRNSKRRRMLAARL
ARASLRGPSARANPKPWPAGKSSQQSCVCSNAPPSPLFPSSTGSTGGLTA
AAAAAVTARQQCSLARSAPIGLLGKSSSSYRACNSSWACSLTKRGAGVGR
ARTAGLSTRFRAPPRVAGTTKGDSRGSIGTAGIGSGTRSFSSFLPRGGST
DSMIVYGMVGLNVAGTIAMYLHTTEGMGGPHMALNFMVSTATTLNMGRLH
TLFTSNFSHSNLWNGAIFSYMMYTLGPTAIQHLGRQQFLALYLLGGAFAQ
LCQVLGPNIARRLGLPTVLQVDPYFISAGGSGAIMAILAWYCASFPGSQI
ILMVVPVQTGVAGALYLGATLYQVVTNGDAVPLLGGPTEEIWRTLGAVAA
GVLVALSSRGRGGGRYKFIQRF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf