prot_P-littoralis_Contig138.7.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig138.7.2
Unique Nameprot_P-littoralis_Contig138.7.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length493
Homology
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: D8LNG0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG0_ECTSI)

HSP 1 Score: 125 bits (314), Expect = 4.980e-29
Identity = 134/319 (42.01%), Postives = 162/319 (50.78%), Query Frame = 0
Query:   91 MDSNLEEEIARLSRPPSNN--NNNDGAPELGVPAVAAVGTLSSTIIQPQNGRLSGEIRNGNHRMTHEAPVQQQQHQRRGSGGLRASQHRGGLAA-AVLAGNSINDVQMHAGSLSSREKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSRPRLPANGEKMAGPSTLRPAFAGXXXXXXSAPLVRTASAGEKLTRASSASRLLPSDGDKFVGFGGGRXXXXXXXXXXXXEV-MTAERVTAALAPSKEEEAWRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRK 405
            MDS LEEEIARLSR P+    ++ DG     +    A   LS+ I+QPQ+GRL+    +G     H   +++       SG    S HR GL + AVLAGNSI+D+QM AGS  S E+                                            +  R  +N      P   RP+   XXXXXX                       +  +G+K  GFGG     XXXXXXXXX     A+ VT     SK+EEAW++SE  L+KKE SVRNALKEKQRTLQQES+LLATVDRELAQLALSHQTEVNDLRK
Sbjct:    1 MDSGLEEEIARLSRAPAGGGGSSGDGGRSEPIHPPGAPAALSTPIVQPQSGRLAAGGADGG-TAVHPPRLRRGSSSGSNSGNNLRSPHRSGLVSGAVLAGNSISDLQMPAGSSGSPEQPRRLGGGSGDV--------------------------------GAAARASSNXXXXXAPPQRRPSXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXIFVNGEKVAGFGGAATAAXXXXXXXXXXXGKGAKGVT-----SKQEEAWKKSEAALKKKEQSVRNALKEKQRTLQQESLLLATVDRELAQLALSHQTEVNDLRK 278          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: M1CQ83_SOLTU (RAB6-interacting golgin n=12 Tax=Solanaceae TaxID=4070 RepID=M1CQ83_SOLTU)

HSP 1 Score: 60.1 bits (144), Expect = 5.160e-7
Identity = 48/138 (34.78%), Postives = 80/138 (57.97%), Query Frame = 0
Query:  344 SKEEEAWRRS--------EETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            SKE+E   RS        EE + K++M VR  ++ +   +++E+  LA +  EL  LA   + +V+ +RK+++VV++EL  + +  QKK + +++A  A + K  EK  + SRL EL+  SEK R  KL E+ K + T
Sbjct:   31 SKEDEEMSRSALSTFKAKEEEIEKRKMEVRERVQAQLGRVEEETRRLAIIREELETLADPMKKDVSTVRKRIDVVNKELKPLGQTCQKKEKEYKEALEAFNEKHKEKVQLISRLMELVGESEKMRLKKLEELSKSIET 168          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A2R6P7A7_ACTCC (RAB6-interacting golgin n=3 Tax=Actinidia TaxID=3624 RepID=A0A2R6P7A7_ACTCC)

HSP 1 Score: 58.2 bits (139), Expect = 2.170e-6
Identity = 41/125 (32.80%), Postives = 75/125 (60.00%), Query Frame = 0
Query:  349 AWRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            A+R  EE + +K+M VR  ++ +    ++E+  LA +  EL  LA   + EV  +RK++++V+REL  + +  QKK + +++A  A + K +EK  + ++L EL+  SE+ R  KL E+ K + +
Sbjct:   39 AFRAKEEEIERKKMEVRERVQAQLGRAEEETKRLAEIREELQALADPMRKEVAIVRKRVDIVNRELKPLGQTCQKKEKEYKEALEAFNEKNSEKTQLLAKLMELVSESERLRMKKLEELSKNLDS 163          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A835RP60_VANPL (RAB6-interacting golgin n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835RP60_VANPL)

HSP 1 Score: 58.2 bits (139), Expect = 2.170e-6
Identity = 41/125 (32.80%), Postives = 74/125 (59.20%), Query Frame = 0
Query:  349 AWRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            A+R  EE + +K++ VR  +  +   +++ES LLA +  EL  +A   + EV  +RK+++VV+RE+  + ++  KK + +++A    + K  EK  + S+L EL+  SE+ R  KL E+ K M +
Sbjct:   39 AFREKEEEIERKKVEVREKVFSQLGRVEKESKLLAEIREELEAMADPMRKEVAAIRKRIDVVNREMKPLGQNCLKKEKEYKEALEVFNEKNREKAQLVSKLMELVSESERLRMRKLEELSKTMDS 163          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: UPI001C4B97D3 (RAB6-interacting golgin-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B97D3)

HSP 1 Score: 57.0 bits (136), Expect = 6.520e-6
Identity = 41/125 (32.80%), Postives = 71/125 (56.80%), Query Frame = 0
Query:  349 AWRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            A+R  EE + +K+M +R  +  +   +++ES  LA + +EL  +    + EV  +RKK+++V+REL  + ++  KK + + +AR A   K  EK  +  RL E +  SE+ R  KL E+ K M +
Sbjct:   49 AFRAKEEQIERKKMEIRERVFARLGRVEEESKTLAMIRKELEAVLDPTRKEVLAMRKKIDMVNRELKLLSQNCLKKEKEYIQAREAFDDKNREKALLVGRLMEAVSESERLRMKKLEELSKTMDS 173          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A165ZSX7_DAUCS (RAB6-interacting golgin n=3 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A165ZSX7_DAUCS)

HSP 1 Score: 56.6 bits (135), Expect = 8.230e-6
Identity = 41/124 (33.06%), Postives = 72/124 (58.06%), Query Frame = 0
Query:  350 WRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            +R  EE + KK++ VR  +  +   +++E+  LA +  EL  LA   + EV  +RKK+++V++EL  + +  QKK + +++A  A + K  EK  +  RL EL+  SE  R  KL+E+ K + +
Sbjct:   46 FRAKEEEIEKKKLEVRERVLAQMSRIEEETKRLAVIREELEGLADPMKKEVGVVRKKIDLVNKELKPLGQTCQKKEKEYKEALEAYNEKNKEKVQLVGRLMELVNESETLRIKKLDELSKSIES 169          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A2P6QGA8_ROSCH (RAB6-interacting golgin n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6QGA8_ROSCH)

HSP 1 Score: 56.6 bits (135), Expect = 8.380e-6
Identity = 41/124 (33.06%), Postives = 74/124 (59.68%), Query Frame = 0
Query:  350 WRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            +R  EE + +K+M VR+ ++ +    ++ S  LA +  EL  L    + EV ++RK++++V+++L  + +  Q+K + +++A  AL+ K  EK  + SRL EL+  SEK R  KL E+ K + T
Sbjct:   47 FRVKEEEIERKKMEVRDKVQAQLGRAEEASRRLAEIREELEALTDPMRKEVANIRKRIDIVNKDLKPLGQSCQRKEKEYKEAVEALNEKNREKAQLLSRLMELVGESEKMRMKKLEELNKHVET 170          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A8J5LF62_ZINOF (RAB6-interacting golgin n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5LF62_ZINOF)

HSP 1 Score: 56.6 bits (135), Expect = 8.680e-6
Identity = 38/120 (31.67%), Postives = 70/120 (58.33%), Query Frame = 0
Query:  350 WRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMK 469
            +R  EE + +K+M ++  +  K   +++ES  LA + +EL  +    + +V+ +RKK+++V+REL  + ++  KK + + +AR A   K  EK  +  +L EL+  SE+ R  KL E+ K
Sbjct:   49 FRAKEEQIERKKMEIKERVFAKLGRVEEESKRLAVIRKELEAMLDPTRKQVSAMRKKIDMVNRELKLLSQNCLKKEKEYMQAREAFGDKNREKAQLVDKLMELVSESERLRMKKLEELSK 168          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A8K0HNA0_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0HNA0_9ROSA)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-5
Identity = 38/124 (30.65%), Postives = 71/124 (57.26%), Query Frame = 0
Query:  350 WRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMKKMST 473
            +R  EE + +K+M VRN ++ +   +++ S  LA +  EL  L    + +V  +RK+++++++EL  + +  QKK + +  A  A + K  EK  + ++L EL+  SE+ R  KL E+ K + T
Sbjct:   48 FRAKEEEIERKKMEVRNKVQAQMGKVEEASKRLADIHEELEALTDPMRKDVAMVRKRIDMINKELKPLGQSCQKKEKEYRDALEAFNEKNREKAELVTKLVELVSESERLRMKKLEELSKNIET 171          
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Match: A0A4D9A966_SALSN (RAB6-interacting golgin n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9A966_SALSN)

HSP 1 Score: 55.5 bits (132), Expect = 1.620e-5
Identity = 39/121 (32.23%), Postives = 72/121 (59.50%), Query Frame = 0
Query:  349 AWRRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEVNDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLTELIMASEKKRDFKLNEIMK 469
            +++  +E + +++M VR  L+ +    ++E+  L  V  EL +L    + EV+++R++LEV +R+L  + +  QKK + +++A  A   K NE+  +T+ L EL+  SEK R  KL E+ K
Sbjct:   32 SYQARDEEIERRKMEVRERLESQITRAEEEAKRLTQVWAELEELTDPMRKEVSNVRRRLEVANRDLKSLHQICQKKEKEYKEAMEAFQEKSNERSQLTTSLMELLNESEKFRMRKLEELSK 152          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig138.7.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D8LNG0_ECTSI4.980e-2942.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
M1CQ83_SOLTU5.160e-734.78RAB6-interacting golgin n=12 Tax=Solanaceae TaxID=... [more]
A0A2R6P7A7_ACTCC2.170e-632.80RAB6-interacting golgin n=3 Tax=Actinidia TaxID=36... [more]
A0A835RP60_VANPL2.170e-632.80RAB6-interacting golgin n=2 Tax=Vanilla planifolia... [more]
UPI001C4B97D36.520e-632.80RAB6-interacting golgin-like n=2 Tax=Zingiber offi... [more]
A0A165ZSX7_DAUCS8.230e-633.06RAB6-interacting golgin n=3 Tax=Daucus carota subs... [more]
A0A2P6QGA8_ROSCH8.380e-633.06RAB6-interacting golgin n=2 Tax=Rosoideae TaxID=17... [more]
A0A8J5LF62_ZINOF8.680e-631.67RAB6-interacting golgin n=2 Tax=Zingiber officinal... [more]
A0A8K0HNA0_9ROSA1.570e-530.65Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A4D9A966_SALSN1.620e-532.23RAB6-interacting golgin n=2 Tax=Salvia splendens T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 400..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..232
IPR007033RAB6-interacting golginPFAMPF04949Transcrip_actcoord: 349..472
e-value: 2.6E-15
score: 56.6
IPR007033RAB6-interacting golginPANTHERPTHR21470RAB6-INTERACTING PROTEIN GORABcoord: 348..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig138contigP-littoralis_Contig138:42096..62164 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig138.7.2mRNA_P-littoralis_Contig138.7.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig138 41825..62209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig138.7.2 ID=prot_P-littoralis_Contig138.7.2|Name=mRNA_P-littoralis_Contig138.7.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=493bp
MLSLLSQPPAPLLQQKLWLEIKPFGLRPSACSLGHVFHFLRYRYMHKGVP
LSLHKLVFRTVQVVEYKPSVSISSTLRLRGVGGKAETALVMDSNLEEEIA
RLSRPPSNNNNNDGAPELGVPAVAAVGTLSSTIIQPQNGRLSGEIRNGNH
RMTHEAPVQQQQHQRRGSGGLRASQHRGGLAAAVLAGNSINDVQMHAGSL
SSREKQQQQQWQQQQQQQQWQQQQQRQGEGSRGVPSTAPAAAAAAAAPSS
RPRLPANGEKMAGPSTLRPAFAGERMAGPSAPLVRTASAGEKLTRASSAS
RLLPSDGDKFVGFGGGRGGGGGGSSGGGAEVMTAERVTAALAPSKEEEAW
RRSEETLRKKEMSVRNALKEKQRTLQQESVLLATVDRELAQLALSHQTEV
NDLRKKLEVVDRELAFMDRDAQKKLEAFEKARTALSAKVNEKHGITSRLT
ELIMASEKKRDFKLNEIMKKMSTDGAAGEGGGGGGVARRGSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007033GORAB