prot_P-littoralis_Contig1005.14.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1005.14.1
Unique Nameprot_P-littoralis_Contig1005.14.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length151
Homology
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BLAST of mRNA_P-littoralis_Contig1005.14.1 vs. uniprot
Match: A0A6H5JXC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC7_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.990e-17
Identity = 48/106 (45.28%), Postives = 60/106 (56.60%), Query Frame = 0 
Query:   45 RTREFAPAACRVVGSLYCECVGEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIAAVETEDVRQTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCF 150
            R RE   AA   VG+ YC     P P+ D ++  ER+ AA+QH G CG   A  IA ++   V   A+    E T K  RN+ACYDA  ALN RG GVQ+RR +CF
Sbjct:   52 RFREALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAAQQHAGLCGKYHAEHIANIDVTMVETRAAGA--EITTKRMRNKACYDAGTALNARGRGVQLRRQKCF 155
[Close]
BLAST of mRNA_P-littoralis_Contig1005.14.1 vs. uniprot
Match: A0A6H5KV53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV53_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.120e-13
Identity = 44/113 (38.94%), Postives = 56/113 (49.56%), Query Frame = 0 
Query:   38 VLEHHTARTREFAPAACRVVGSLYCECVGEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIAAVETEDVRQTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCF 150
            V E H  R REF   A    G+  C      + +     R++   AA++HPG CGV +AG    V  +DV   A RR    TF    NQ C+DAA+ L V G GVQ+ R  CF
Sbjct:    4 VRESHPGRVREFVFDAVVAAGAGSCLHDDPLKALPGGLTRDQGVEAAKEHPGLCGVYLAG----VSFDDVLAAAERRGVSVTFNVLLNQCCFDAAKKLRVGGMGVQLARKECF 112
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1005.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JXC7_9PHAE1.990e-1745.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KV53_9PHAE4.120e-1338.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1005contigP-littoralis_Contig1005:39439..41009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1005.14.1mRNA_P-littoralis_Contig1005.14.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1005 39438..41009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1005.14.1 ID=prot_P-littoralis_Contig1005.14.1|Name=mRNA_P-littoralis_Contig1005.14.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=151bp
KQQRHQRVWRTKTTHTMFTRRSSKPTVAPSMPSFSSCVLEHHTARTREFA
PAACRVVGSLYCECVGEPQPMKDFTQREERRVAARQHPGTCGVAMAGLIA
AVETEDVRQTASRRQQEATFKSFRNQACYDAARALNVRGAGVQVRRNRCF
E
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