mRNA_P-littoralis_Contig1379.6.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1379.6.3
Unique NamemRNA_P-littoralis_Contig1379.6.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 420 bits (1080), Expect = 2.760e-139
Identity = 201/345 (58.26%), Postives = 255/345 (73.91%), Query Frame = 1
Query:  130 LVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            LVD LRP L++N  MG  RNGA+PVE QV  TLRWLAGG + +   GH+IA+STAY     VI A+ AC  L C+WPE + D    A  F++RS+  V+ KCVGA DGLFVR ++P++ +  EPN +Y+GHKKGFGMNFQA   +CDAQYRI AW MNCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQA---VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 413          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 2.140e-133
Identity = 207/383 (54.05%), Postives = 261/383 (68.15%), Query Frame = 1
Query:    7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1155
            P+ R   +RR+RRSW  Y+KP++ DGTFR  FRMD+ +F  L DMLRP+LERN  MG+ RNG +PVE+Q+   LR+LAGG + ++  G++IA+STAY     VI AI     L+C WPE +   D     ++ RSTNGVI  CVGAMDGLFVR  +P+      P SFYSGHKKGFGMNFQ    +C+A+Y I AWTMNCPGS NDRTAFK S F  +L+ LP G YIVGDAAYP SD VLVPYPGT ++ SQDA N+Y SQ RI+IEQ FGI+V+ WGILW+PL++RL  V+ ++ S+VRLHNF R R+  +P +    V  P  + F   G     +F+T P+  GR  R   R SAPRE IR+ LEQ  +GRP  N+ RN
Sbjct:   39 PQTRDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQG---VCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIPRSP-WRVTQPVEVRFRPDGSLEGTYFDTVPTR-GRQTRG-GRASAPREAIRQYLEQYSIGRPRWNLQRN 414          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 386 bits (991), Expect = 8.940e-126
Identity = 202/386 (52.33%), Postives = 260/386 (67.36%), Query Frame = 1
Query:    7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            P HR   + R+RRS+  Y +P++ D TFR  FRMD+ DFM L D+LRP+L+R+  MG+ RNGA+PVE+Q+  TLR+LAGG + ++   ++IAKSTAY     VI AI     L C+WP    D ++ A  ++ RSTNGVI +CVGAMDGLFVR + P       P SFYSGHKK FGMNFQ    IC+A Y I  WTMNCPGSQNDRTAFK SGF  LL  +P   +IVGDAAYP S+ VLVP PGT ++ SQDA N+Y SQ RI+IEQ FGILV+ W ILWKPL +RL  V  ++ ++VRLHNF R R+  V    A +V +P ++ F+  G     +++T P+  GRP++  A V  PRE IR  L+Q  MGRP  N++RN +R
Sbjct:   43 PAHRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQG---ICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVPTR-GRPSKA-AEVCMPREIIRDYLDQKSMGRPRFNLNRNVNR 421          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 365 bits (938), Expect = 3.130e-118
Identity = 188/385 (48.83%), Postives = 248/385 (64.42%), Query Frame = 1
Query:   10 KHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            ++RSTL+ R+RR +  Y KP+L D TF   FRM++DDF  LVD LRP L++N   G  RNGA+PVEYQV  TLRWLAGG + +   GH+IA+STAY     VI A+ AC  L C+WPE + D     +   + +   V+ KCVGAMDGLFVR ++P++ +  EPN +Y+GHKKGFGMNFQ    +C               SQNDRTAF  SGF KLL  LP+G+++VG+AAY  S+ V+VP+PGT                    EQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFC DRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   44 RNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ----VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 392          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 9.580e-103
Identity = 149/248 (60.08%), Postives = 192/248 (77.42%), Query Frame = 1
Query:  421 VIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            V+ KCVGAMDGLFVR ++P++ +  EPN +Y+GHK GFGMNFQA   +CDAQYRI AWTM+CPGSQNDRTAF  + F KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILVRRWGILW+P+E+R+     +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQA---VCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 261          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 2.180e-95
Identity = 171/383 (44.65%), Postives = 213/383 (55.61%), Query Frame = 1
Query:   16 RSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            RSTL+ R RR +  Y KP+L D TF   FRM++DDF  LVD LRP L++N  MG  RNGA+PVEYQV  TLRWLAGG   +   GH+IA+STAY                                                                                       A+CDAQYRI AW MNCPGSQNDRTAF  SGF KLL  LP+G+++VGDAAY  S+ V+VP+PGT +S SQDA NYY+SQCR+AIEQT+GILV   G+    +E        +V ++VRLHNFCRDRKV+VPT   G    P  + F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+  R
Sbjct:   46 RSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYH--------------------------------------------------------------------------------------AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 335          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 2.360e-95
Identity = 158/305 (51.80%), Postives = 200/305 (65.57%), Query Frame = 1
Query:  241 GGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1155
            GG + ++  G + AKSTAY     VI AI      +C WPE     D     ++ RSTN VI  CVGAMDGLFV    P+      P  FYSGHKKGFGMNFQA   +C+A+Y+I AWTMNCPGS NDRTAFK SGF ++L+ LPKG YIVGD AYP SD VLVPYPGT ++ SQD+ N+Y SQ RI IEQ FG +V+ WGILW+PL+++LG V+ ++ ++VRLHNF R  + +VP +    V  P  + F   G     +++T P+  GRP   Q RVSAPRE IR+ L+Q  +GRP  N+ RN
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQA---VCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVPQSP-WRVDQPQEVRFAPDGSLEGTYYDTVPTR-GRPTTGQ-RVSAPREAIRQYLKQYSIGRPRWNLQRN 348          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 1.660e-86
Identity = 158/385 (41.04%), Postives = 212/385 (55.06%), Query Frame = 1
Query:   10 KHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRNKDR 1164
            ++RSTL+ R+RR +  + KPLL D TF   FRM++DDF  L+D LRP L +N  MG  R GA+PVEYQ+  TLRWLAGG + +   GH+IA+STAY     VI A+ AC  L C+WPE + D               V+ KCVGAMDGLFVR ++P++ +  EPN +Y+GH+KG                                                    +VGDAAY  S+ V+VP+PGT +S SQDA N Y+SQ R+AIEQT+GILVRRWGILW+P+E+R+     +V                                F+  G  S+D+FET P  +GRP ++QA+ S PRE IR++LE  G+ RP HNI+R+ +R
Sbjct:   44 RNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV---------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV-------------------------------AFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLIRPEHNIARSHNR 331          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 222 bits (565), Expect = 1.460e-62
Identity = 124/314 (39.49%), Postives = 176/314 (56.05%), Query Frame = 1
Query:    7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMGSHR--NGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITAC-EALECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKV 939
            P  R  +   QR  W  ++  L     F+  +RM    F  L ++L P L  N H    R  NGA+ V+ ++   LR LAG   LD+     +   T Y T   VI AI +  E     +P+ + D    AA FK +STNG+ + CV  +DGLFV+TL P+  DT    ++YSG K  +G+N QA   +C A YR  + +   PG+ ND  A+  S   + +  LPKG+Y++GDAAYP S+ +L PYPG  +   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL++       L+ +L RLHNF RD +V
Sbjct:   56 PAIRRPVYEPQRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQA---MCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQV 366          
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Match: A0A6H5KNZ9_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNZ9_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 5.730e-60
Identity = 140/388 (36.08%), Postives = 204/388 (52.58%), Query Frame = 1
Query:    7 PKHRSTLIRRQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPELERNPHMG---SHRNGAVPVEYQVGNTLRWLAGGQMLDIKQGHMIAKSTAYQTAVHVIKAITACEAL-ECRWPEKQTDYDSIAAGFKSRSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQARTAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAAYPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWKPLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSGEFS-NDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN 1155
            P+ R  +   +R  WA +   L     +R S+R++   F  LV++LRP LE     G   S RNGA+ VE +V   L  LA     D+     ++ +  Y     VI AI    A+    +P  +      A  FK +ST+G+ +  V A+DGLF++   P + +T    ++YSG K  +G+N QA   +C A YR  A +   PGS ND  A+  S   K +  LP G++I+GDAAYP  + +L PYPG ++   +D+ N++LSQ R+ IEQ+FGILV  WGILW+PL ++LG  A L+ +L  LHNF +D KV        D R   N     + + +  D + TEP+ S R     AR +     IR+ LE     RP +N+ RN
Sbjct:   68 PQEREPINEPKRLPWAQHEADLDKRRGWRRSYRLEKGSFHKLVELLRPSLEVIAFFGALRSPRNGAIAVEVRVAVALTILADASYWDVLLMFGLSVAVTYLVLWEVIDAINNTPAVGPFAFPLTEKGCMRNANRFKDKSTDGIFSWVVAAVDGLFIKAEAPRAKETKNVIAYYSGSKSAYGINVQA---MCTADYRFCAMSAISPGSTNDWVAWNRSSLAKAVARLPTGFHIIGDAAYPIGEKLLTPYPGRQLPAGEDSFNFHLSQLRVKIEQSFGILVSTWGILWRPLRVQLGGRADLITALFHLHNFLQDEKVAPIQLSEEDSRSRLNRPALCATQHTLPDDWGTEPAPS-RSGETPARAA-----IRKALELKKQWRPDYNLQRN 446          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1379.6.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE2.760e-13958.26DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE2.140e-13354.05DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE8.940e-12652.33DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE3.130e-11848.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNF2_9PHAE9.580e-10360.08DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K540_9PHAE2.180e-9544.65DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE2.360e-9551.80DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE1.660e-8641.04DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE1.460e-6239.49DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5KNZ9_9PHAE5.730e-6036.08DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1379contigP-littoralis_Contig1379:15846..18625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size1818
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons3
Evalue1.01e-48
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size1068
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789635.4926903-UTR-P-littoralis_Contig1379:15845..164901680789635.4926903-UTR-P-littoralis_Contig1379:15845..16490Pylaiella littoralis U1_48UTRP-littoralis_Contig1379 15846..16490 -
1680789635.537343-UTR-P-littoralis_Contig1379:18520..186251680789635.537343-UTR-P-littoralis_Contig1379:18520..18625Pylaiella littoralis U1_48UTRP-littoralis_Contig1379 18521..18625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789635.506333-CDS-P-littoralis_Contig1379:16490..168351680789635.506333-CDS-P-littoralis_Contig1379:16490..16835Pylaiella littoralis U1_48CDSP-littoralis_Contig1379 16491..16835 -
1680789635.515285-CDS-P-littoralis_Contig1379:17085..173551680789635.515285-CDS-P-littoralis_Contig1379:17085..17355Pylaiella littoralis U1_48CDSP-littoralis_Contig1379 17086..17355 -
1680789635.5253057-CDS-P-littoralis_Contig1379:18067..185201680789635.5253057-CDS-P-littoralis_Contig1379:18067..18520Pylaiella littoralis U1_48CDSP-littoralis_Contig1379 18068..18520 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1379.6.3prot_P-littoralis_Contig1379.6.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1379 16491..18520 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1379.6.3

>prot_P-littoralis_Contig1379.6.3 ID=prot_P-littoralis_Contig1379.6.3|Name=mRNA_P-littoralis_Contig1379.6.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=356bp
MDHDDFMDLVDMLRPELERNPHMGSHRNGAVPVEYQVGNTLRWLAGGQML
DIKQGHMIAKSTAYQTAVHVIKAITACEALECRWPEKQTDYDSIAAGFKS
RSTNGVIAKCVGAMDGLFVRTLRPNSPDTHEPNSFYSGHKKGFGMNFQAR
TAICDAQYRIRAWTMNCPGSQNDRTAFKVSGFPKLLEALPKGYYIVGDAA
YPGSDVVLVPYPGTKVSDSQDALNYYLSQCRIAIEQTFGILVRRWGILWK
PLELRLGNVAPLVESLVRLHNFCRDRKVEVPTAEAGDVRIPSNIGFNQSG
EFSNDFFETEPSSSGRPARNQARVSAPREDIRRQLEQLGMGRPAHNISRN
KDRKR*
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mRNA from alignment at P-littoralis_Contig1379:15846..18625-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1379.6.3 ID=mRNA_P-littoralis_Contig1379.6.3|Name=mRNA_P-littoralis_Contig1379.6.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2780bp|location=Sequence derived from alignment at P-littoralis_Contig1379:15846..18625- (Pylaiella littoralis U1_48)
CAGAAACCGAAGCACCGCAGCACGCTGATCCGGCGTCAAAGGCGAAGCTG GGCGGCTTACAGCAAGCCCCTCCTGGCAGACGGGACCTTCAGATCGAGTT TCCGCATGGACCACGACGACTTCATGGACCTGGTGGATATGCTCCGCCCT GAACTGGAGAGAAACCCTCACATGGGGAGCCATCGCAACGGTGCGGTCCC TGTAGAGTACCAGGTCGGGAATACTCTGCGGTGGTTGGCTGGTGGTCAAA TGCTCGACATCAAGCAAGGCCATATGATCGCGAAGAGCACGGCGTACCAG ACGGCCGTCCATGTCATCAAGGCGATCACTGCCTGTGAGGCGCTGGAATG CCGGTGGCCCGAGAAACAGACGGATTACGACAGCATCGCGGCCGGGTTCA AGAGCCGCAGCACGAACGGTGTGATCGCCAAGTGCGTGGGAGCCATGGAC GGGCTTTTCGTCCGCACCCTGAGGCCGAACTCCCCGGACACACATGAGCC CAACTCCTTCTACAGTGGCCACAAGAAGGGTTTCGGGATGAACTTCCAGG CAAGAACAGTGATTAAGCTCCTACTTGGGGGTGCTGCTATTTTTTTTTTA TACGGGATGAAACATTGGGAATCATGTGCCCCGAACGCCGCTGCGGCAGC AGCAGATACTTTTGCCGCTGCTGTTTGCTGTAATTGTTGTGGATTATCAC ATTAGCTCACTACCGCCGCAGTGTAGCCCGTGGTCACAAACCAGTCACAT ATCGTGCTAGGAGAAATGAAAATAAAATAAATGGACCATGATCACCCACA GTCAAATCAGATAGGGTACCGTTGGGGTACCATCTGTGGTGGCCAAAGTA TCAAACAAAATACAGAAAAAAGTTAACAGGTTCGATGGAATGTTGCGGAG GTATCACATATTTCCAACATAATAATTCAGCACAACGTGACTCCGTGATA TATGCTGCGTAATTTTCAAGCAGCGTTGTCGGCGTAGGTCACATACCACG TTGTCCCACGTCAGCGACGAAGTTCATCGTCACAGCGCGTGACATGTGCT GCGGCCGAAATAAATTTTGTTGGCGGTGAATGCACAGGGTTGAAGTCGTC CGTAGTACAGCAGCGGTACCGAGCCTTTTCTGAATCTTTGTCGGCGTCGT GCACAGGAAAATATATTTTCGTACGACGTTCGTACAATGCAGTGGAGGCG CTTGCTACTGTTGCGTTCCCTCGCATCTGACACGATCTACGCACAAACTC GATGTTGCTCTGTTGAACAGGCTATCTGCGACGCGCAATACAGGATCAGG GCATGGACTATGAACTGCCCGGGAAGCCAAAACGACCGCACGGCCTTTAA GGTTTCCGGCTTCCCCAAGCTCCTCGAAGCTTTGCCGAAAGGTTACTACA TCGTGGGGGACGCGGCGTACCCGGGTTCGGACGTCGTTCTCGTTCCGTAC CCGGGAACGAAGGTGTCGGATAGCCAGGATGCGTTGAACTACTACCTGTC TCAGTGCAGGATTGCCATCGAGCAGACGTTCGGGATCCTGGTGAGTATCA AGTGTCAACTTCTGTGTTCGCATACAACGGGTGCTGTTGTTGTCGGATAC TATTTTGTTCTCGTGCACGTAAAACTTAGGTTTTACGTGTGGGTCCGCAC GGGGTGATTTTTTTTCTTCGGAACAGTCTTGTTGCGTGAGTTTTGCTGAA CCTTATAGATCACGAGCACACGAGCAGGTTTCTATATCATTCATTCTTGA CTGTCCACCTATTTTTGGCGTTTCTCTTGATGATATGTAGGTCAGGAGGT GGGGCATCCTCTGGAAGCCGTTGGAGCTCCGGCTGGGCAACGTTGCCCCG CTTGTCGAGAGTCTCGTTCGCCTGCACAACTTCTGCCGAGACCGAAAGGT GGAGGTGCCAACGGCGGAGGCTGGAGACGTTCGTATCCCCAGCAACATCG GCTTCAACCAAAGCGGAGAGTTCAGCAACGACTTTTTCGAAACCGAGCCC TCCTCGTCTGGTCGCCCGGCGAGAAACCAGGCTCGGGTGTCGGCTCCCCG GGAGGACATCCGCCGACAGCTCGAACAACTAGGCATGGGGCGGCCGGCGC ACAACATCTCTAGGAACAAAGACCGCAAGCGGTGAATCGTTGAACTGATT GTGTGGAGGGCACGGTGTTCGTCGCAGTCTACGTTTGGGATGGGGGTATT GCTTATCTGTCCTCTCGGTTTGAGTGCAGGTCGCGGTAGGTAGGCGCGTG CGCTCGGCCTATGGGGTAATGCCGCAGGTAACCTCTGCCACGTCGAGGAA AGGAAACTACCACGGGTGGACTTTCTTTGTCTCTTTGGTTTTGGAACGGG CTTTGTGTGTCTCAAGTTGATTTGTCGTCCCCTTACGGCTTCCTCTTCAA ATTTTTCTAATGCTCACACCTCTATATGTTGTGTGTGTTGGGACATTATT CATGTATTGTATATTGTCGCGGAGGTCTGCTGTGTTGATTGTGAGGAAGA TGAATTACCTTGGATAGCCTTTGTGAAGTCTGTGTCGTCCTAACTTTCAC GCTTTCATTTTGTTTTATCTTAATATGCGAGTTTGTGGTATTAAGACCCG CTCATGCGTGGCGTGGCGGGATTCGGATGCGGAATGCACCAGTGGAGGTT GTTGATGGTGTCTGGGAAATTCCTTCCATGGTCCGCCCCCGAATGGACTT GTTCTGCACGGCAGCATCGGCGTACGTATGTGTGTGGCATGTGTTTATCG GTCTTTGTTCGGTCTGGCGTATTTTTCTTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1379:15846..18625-

>mRNA_P-littoralis_Contig1379.6.3 ID=mRNA_P-littoralis_Contig1379.6.3|Name=mRNA_P-littoralis_Contig1379.6.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1068bp|location=Sequence derived from alignment at P-littoralis_Contig1379:15846..18625- (Pylaiella littoralis U1_48)
ATGGACCACGACGACTTCATGGACCTGGTGGATATGCTCCGCCCTGAACT
GGAGAGAAACCCTCACATGGGGAGCCATCGCAACGGTGCGGTCCCTGTAG
AGTACCAGGTCGGGAATACTCTGCGGTGGTTGGCTGGTGGTCAAATGCTC
GACATCAAGCAAGGCCATATGATCGCGAAGAGCACGGCGTACCAGACGGC
CGTCCATGTCATCAAGGCGATCACTGCCTGTGAGGCGCTGGAATGCCGGT
GGCCCGAGAAACAGACGGATTACGACAGCATCGCGGCCGGGTTCAAGAGC
CGCAGCACGAACGGTGTGATCGCCAAGTGCGTGGGAGCCATGGACGGGCT
TTTCGTCCGCACCCTGAGGCCGAACTCCCCGGACACACATGAGCCCAACT
CCTTCTACAGTGGCCACAAGAAGGGTTTCGGGATGAACTTCCAGGCAAGA
ACAGCTATCTGCGACGCGCAATACAGGATCAGGGCATGGACTATGAACTG
CCCGGGAAGCCAAAACGACCGCACGGCCTTTAAGGTTTCCGGCTTCCCCA
AGCTCCTCGAAGCTTTGCCGAAAGGTTACTACATCGTGGGGGACGCGGCG
TACCCGGGTTCGGACGTCGTTCTCGTTCCGTACCCGGGAACGAAGGTGTC
GGATAGCCAGGATGCGTTGAACTACTACCTGTCTCAGTGCAGGATTGCCA
TCGAGCAGACGTTCGGGATCCTGGTCAGGAGGTGGGGCATCCTCTGGAAG
CCGTTGGAGCTCCGGCTGGGCAACGTTGCCCCGCTTGTCGAGAGTCTCGT
TCGCCTGCACAACTTCTGCCGAGACCGAAAGGTGGAGGTGCCAACGGCGG
AGGCTGGAGACGTTCGTATCCCCAGCAACATCGGCTTCAACCAAAGCGGA
GAGTTCAGCAACGACTTTTTCGAAACCGAGCCCTCCTCGTCTGGTCGCCC
GGCGAGAAACCAGGCTCGGGTGTCGGCTCCCCGGGAGGACATCCGCCGAC
AGCTCGAACAACTAGGCATGGGGCGGCCGGCGCACAACATCTCTAGGAAC
AAAGACCGCAAGCGGTGA
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