prot_P-littoralis_Contig1379.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1379.2.1
Unique Nameprot_P-littoralis_Contig1379.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length212
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig1379.2.1 vs. uniprot
Match: A0A6H5KYJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ0_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 3.460e-36
Identity = 81/186 (43.55%), Postives = 104/186 (55.91%), Query Frame = 0 
Query:   30 WRASYSDQPEWAQTPLGCTPEKKKKDHERRVNKAAKACGSVDEKGSAGLSVNEGYLCRLVCLTLSPPLWDLYHISRGK---ISRAEQDAGETGCKHEFYVKLAQGMVDEEWKDSNGNKVSVPSDHSQDDKAPEGLRRQLRSLDLEGAARGLKNERRIKWKNNEDAFMYDLQKRCFDWLKEVRKNHT 212
            WRAS   +PEW     G TPEKKKK    R            + G    + ++   CRLVCLTL P   D Y   +G     +R E D   TG KH F+ ++A+ M     +D NGN +SVP +HS D+ A E L+  L+ LDLEGAA+ L+ E R K+K ++ AF  DLQ RCF+WLKEVR  HT
Sbjct:    3 WRASLGVEPEWKGIRYGVTPEKKKKLRRSR------------QPGQPTPNSSQALCCRLVCLTLHPEFKDDYMCFKGGGEGTARTELDVRATGAKHGFFARVARAMATPTCRDGNGNPLSVPDEHSNDELASEHLKSLLKRLDLEGAAKSLQEELRGKFKGDDGAFYADLQLRCFNWLKEVRGKHT 176
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1379.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KYJ0_9PHAE3.460e-3643.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1379contigP-littoralis_Contig1379:11417..12052 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1379.2.1mRNA_P-littoralis_Contig1379.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1379 11417..12053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1379.2.1 ID=prot_P-littoralis_Contig1379.2.1|Name=mRNA_P-littoralis_Contig1379.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=212bp
TADGDDNVLRQISAAKKDDMVDALIKRADWRASYSDQPEWAQTPLGCTPE
KKKKDHERRVNKAAKACGSVDEKGSAGLSVNEGYLCRLVCLTLSPPLWDL
YHISRGKISRAEQDAGETGCKHEFYVKLAQGMVDEEWKDSNGNKVSVPSD
HSQDDKAPEGLRRQLRSLDLEGAARGLKNERRIKWKNNEDAFMYDLQKRC
FDWLKEVRKNHT
back to top