prot_P-littoralis_Contig1005.10.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1005.10.1
Unique Nameprot_P-littoralis_Contig1005.10.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length342
Homology
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5JW40_9PHAE (HTH La-type RNA-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW40_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.670e-60
Identity = 108/258 (41.86%), Postives = 149/258 (57.75%), Query Frame = 0
Query:    1 MFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPDGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHP--DGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            MFP   + L V +TN Y   CTT       D R+     K  T G  + P+       +Y ++GI +T+GL +   +  HW  S + D+ LVR+ M+RD+F L+Y RF H +   +P R    D + +  +D+ WHIR  E +LN  W+      QW+ +DEQMV  V   A +++R+ PKKPI +G+KL+A+    GYCF S  DGG  GDPKLR W DCPLGRT R VL VL GAC    +++  SG Y+AMDN+F
Sbjct:  643 MFPDEAIDLFVDKTNKYVNLCTTPSLPGAKDTRKAHQVEKTRTLGMVTLPEPAFERKHIYGMLGITITMGLTKKTRMRKHWSRSLHDDYPLVRECMSRDLFELLYCRFIHCSDGNAPPRWAGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNQWLCYDEQMVKTVSTFAHYLMRHSPKKPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGAYIAMDNYF 900          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KMJ3_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ3_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.620e-50
Identity = 84/196 (42.86%), Postives = 120/196 (61.22%), Query Frame = 0
Query:   62 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRH-PDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            +IGI +T+GL +   +  HW  S + ++ LV++ M RD+F L+Y RF H +   +P+R  PDG  +  +D+ WHIR  E +LN  W+       W+S+DEQM+  V + +  +  Y P KPIK+G+KL A    + Y   S  DGG  GDPKLR + DCPLGRT R VL VL G C  L +++  SG ++AMDN+F
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMPRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKWHIRELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITSYSLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGLFIAMDNYF 228          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KPD8_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD8_9PHAE)

HSP 1 Score: 173 bits (439), Expect = 4.000e-48
Identity = 85/204 (41.67%), Postives = 112/204 (54.90%), Query Frame = 0
Query:   53 GITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            G     +Y+V G              +H  V  + ++ +VR  M RD+F+L Y RFFH+APA       D  YD       HIR  E +LN+ WS     G W+S+DEQMV    R    ++RY   KPIK+G+K WA+ C SGY F    DGGF GD KLR +A CPLGR+ R V++VL  AC   + +++  G  VAMDNFF
Sbjct:   28 GFERKHLYSVTGXXXXXXXXXXXXXXDHCGVEAHDNYPMVRACMPRDLFVLFYGRFFHLAPATGKLNKDDPKYD----CKHHIRKLEDVLNKCWSELVEPGAWLSYDEQMVKSTARVMLALMRYNKAKPIKHGIKCWAICCPSGYSFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFF 227          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5JJP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJP9_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.250e-44
Identity = 81/179 (45.25%), Postives = 112/179 (62.57%), Query Frame = 0
Query:   80 HWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHP--DGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            HW  S + D+ LVR+ M+RD+F L+YSRF H +   +P R    D + +  +D+ WHIR  E +LN  W+      +W+ +DEQM+  V   A +++R  PK+PI +G+KL+A+    GYCF S  DGG  GDPKLR W DCPLGRT R VL VL GAC    +++  SG ++AM N F
Sbjct:  668 HWSRSLHDDYPLVRKCMSRDLFELLYSRFIHCSDGNAPPRWTGEDKTPNPEFDSKWHIRELEDILNNAWTENMDFNEWLCYDEQMMRTVSTFAHYLMRDNPKEPITHGMKLFAICDIEGYCFVSSVDGGMNGDPKLRVWFDCPLGRTTRHVLHVLLGACKKFGDKIDGSGVHIAMSNNF 846          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KCC7_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCC7_9PHAE)

HSP 1 Score: 162 bits (409), Expect = 2.850e-42
Identity = 80/196 (40.82%), Postives = 115/196 (58.67%), Query Frame = 0
Query:   62 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRH-PDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            +IGI +T+GL +   +  HW  S + ++ LV++ M+RD+F L+Y RF H +   +P+R  PDG  +  +D+  HIR  E +LN  W+     G W+S+DEQM+  V +              + G+KL A    +GYC  S  DGG  GDPKLR + DCPLGRT R VL VL G C  L +++  SG ++AMDN+F
Sbjct:   33 MIGIFITMGLTKKVRMRKHWSRSAHDNYPLVQKCMSRDVFELLYCRFLHCSDPNAPERLLPDGEENPDYDSKRHIRELEEILNTAWATNVECGNWLSYDEQMIKTVSK-------------YEQGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRTTRHVLHVLLGECGVLRQKIDGSGVFIAMDNYF 215          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KQZ5_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQZ5_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 1.930e-41
Identity = 79/183 (43.17%), Postives = 104/183 (56.83%), Query Frame = 0
Query:   97 TRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFFFFACPLQLPSLARVVRCGYTEGH 279
            T ++F+L Y RFF++APA       D  YD       HIR  E + N+ WS     G W+S+DEQMV    R    ++RY   KPIKNG+K WA+ C SGYCF    DGGF GD KLR +A CPLGR+ R V++VL  AC   + +++  G  VAMDNFF  A  L+  +   +   G   G+
Sbjct:    6 TTNLFVLFYGRFFNLAPATGKLNKDDPQYD----CKHHIRKLEDVFNKCWSELVEPGAWLSYDEQMVKSTARVMFALMRYNKAKPIKNGIKCWAICCPSGYCFVQSIDGGFSGDIKLRPYASCPLGRSARTVMYVLLEACETFSNKIIGKGITVAMDNFFTGAPLLRCLATRDIFAVGTLRGN 184          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5L3T1_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3T1_9PHAE)

HSP 1 Score: 145 bits (366), Expect = 3.170e-35
Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 0
Query:    1 MFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPDGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIR 136
            MFP AV+ LLV++TN+YF FC +T        +E RH+ ++   G++SWP  GIT +MM  VI I+LT+GLV+LP + +HW    +HD+KLVR  + RDMFLLIY RFFHMA + +P+R   G+ + GWD+L HIR
Sbjct:  500 MFPAAVILLLVRKTNEYFNFCRSTKNPKG---QEQRHRDQKARKGKSSWPKKGITKSMMQGVISIILTIGLVQLPAMHDHWSCHSFHDYKLVRACLPRDMFLLIYGRFFHMASSGAPERLQGGTTEPGWDSLHHIR 632          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5JFU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU5_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 4.840e-35
Identity = 70/136 (51.47%), Postives = 93/136 (68.38%), Query Frame = 0
Query:    1 MFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWPDGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIR 136
            MFP AV+ LLV++T +YF FC +T    E   +E RH+ K+   G++SWP  GIT  MM  VIGI+L +GLV+LP + +HW    +HD+KLVR  + RDM LLIY RFFHMA + +PKR  DG+ + GW +L HIR
Sbjct:  706 MFPAAVILLLVRKTYEYFNFCRSTKNPKE---QEQRHRDKKARKGKSSWPKKGITKRMMQGVIGIILAIGLVQLPAVHDHWSCHSFHDYKLVRACLPRDMSLLIYGRFFHMASSGAPKRLQDGTTEPGWGSLHHIR 838          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KG44_9PHAE (DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG44_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 6.990e-35
Identity = 67/147 (45.58%), Postives = 87/147 (59.18%), Query Frame = 0
Query:  136 RAFETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFFFFACPLQLPSLARVVRCGYTEGHSPG 282
            R  E +LNE WS     G W+S+DEQMV    R    ++R+   KPIK G+K WA+ C SGYCF    DGGF GD KLR  A CPLGR+ R VL+VL  ACP  +++++ SG  VAMDNFF  A  ++  +   +   G   G+  G
Sbjct:    3 RELEDLLNECWSKLVEPGAWLSYDEQMVKSTARAMFALMRFNKTKPIKTGIKGWAICCPSGYCFVQSIDGGFSGDIKLRPHATCPLGRSARTVLYVLLEACPTFSDKIVGSGITVAMDNFFTGASLVRCLATRDIFAVGTLRGNRTG 149          
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Match: A0A6H5KJJ0_9PHAE (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ0_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 3.840e-33
Identity = 74/198 (37.37%), Postives = 110/198 (55.56%), Query Frame = 0
Query:   62 VIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDMFLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRA---FETMLNETWSGACLVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFASYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYVAMDNFF 256
            +IGI +T+GL +   +  +W  S + ++ LV++ M+  + L  + R    +      R  + S       L+H+RA    E +LN  W+       W+S+DEQM+  V + +  +  Y P KPIK+G+KL A    +GYC  S  DGG  GDPKLR + DCPLGR  R VL VL G C  L +++  SG ++AMDN+F
Sbjct:   33 MIGIFITIGLTKKVRMQKNWSRSAHDNYPLVQKCMSVLLQLGWWGRDRRGSKGTGAPRKVEDS-PPSTAPLFHVRAVWELEEILNTAWAANVECDNWLSYDEQMIKTVSKYSSKVSFYCPAKPIKHGMKLLAACDITGYCLTSSVDGGMKGDPKLRPYMDCPLGRATRHVLHVLLGECGVLRQKIDGSGVFIAMDNYF 229          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1005.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JW40_9PHAE1.670e-6041.86HTH La-type RNA-binding domain-containing protein ... [more]
A0A6H5KMJ3_9PHAE5.620e-5042.86DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KPD8_9PHAE4.000e-4841.67DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JJP9_9PHAE2.250e-4445.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCC7_9PHAE2.850e-4240.82DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KQZ5_9PHAE1.930e-4143.17DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L3T1_9PHAE3.170e-3550.74DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5JFU5_9PHAE4.840e-3551.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KG44_9PHAE6.990e-3545.58DDE_Tnp_1_7 domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KJJ0_9PHAE3.840e-3337.37DDE_Tnp_1_7 domain-containing protein n=1 Tax=Ecto... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029526PiggyBac transposable element-derived proteinPFAMPF13843DDE_Tnp_1_7coord: 1..256
e-value: 2.5E-17
score: 63.2
NoneNo IPR availablePANTHERPTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4coord: 2..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1005contigP-littoralis_Contig1005:33589..36621 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1005.10.1mRNA_P-littoralis_Contig1005.10.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1005 33234..38409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1005.10.1 ID=prot_P-littoralis_Contig1005.10.1|Name=mRNA_P-littoralis_Contig1005.10.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=342bp
MFPMAVVALLVKETNDYFTFCTTTPTRNEDDKREDRHKAKEPTNGRASWP
DGGITANMMYTVIGIVLTLGLVRLPEIANHWDVSDYHDFKLVRQSMTRDM
FLLIYSRFFHMAPAPSPKRHPDGSYDEGWDALWHIRAFETMLNETWSGAC
LVGQWISFDEQMVLCVGRTAKFMLRYMPKKPIKNGLKLWAVACFSGYCFA
SYTDGGFVGDPKLRKWADCPLGRTCRMVLFVLFGACPNLAEQLLQSGTYV
AMDNFFFFACPLQLPSLARVVRCGYTEGHSPGSQPGRAVLDHHQADPEAE
GGHGFREVRVFDLHAVEGLQACPASLHHPRQQGRLRPNPVQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029526PGBD