mRNA_P-littoralis_Contig1378.11.1 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5L481_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L481_9PHAE) HSP 1 Score: 127 bits (318), Expect = 1.680e-32 Identity = 60/99 (60.61%), Postives = 80/99 (80.81%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLPAWLTVEK 297
+N+DE LPLPL Y++YVKT+ L L + + T KQ ++ +Q+VCIVY+CLAVKRNAG++ E+K AAAA+GY EIAVPGFFRWARDNDI P+ LT+++
Sbjct: 3 INVDEVLPLPLVYNDYVKTSINLALENKKLFTLKQQMLFIQNVCIVYSCLAVKRNAGVVGTEAKRAAAAQGYREIAVPGFFRWARDNDITFPSELTMKR 101
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5KDP2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDP2_9PHAE) HSP 1 Score: 113 bits (282), Expect = 2.320e-30 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVE 294
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFE 101
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JUY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUY9_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.510e-29 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVE 294
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFE 101
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JZP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZP4_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.730e-29 Identity = 58/99 (58.59%), Postives = 76/99 (76.77%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDNDIVLP-AWLTVE 294
M LD PLPLE++ YV+ +L LL + ++Q +LL H+Q+VCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGFF+W ++N IV+ AWLT E
Sbjct: 4 MKLDNVQPLPLEFNGYVEGTLEL-LLGGKGLSQIKLLKHLQNVCIVYACLAVKRNAGIVSTEAKYKAAAKGYKDIAVPGFFKWLKENGIVIKQAWLTFE 101
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JXZ8_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ8_9PHAE) HSP 1 Score: 102 bits (255), Expect = 4.230e-26 Identity = 51/102 (50.00%), Postives = 70/102 (68.63%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVE 294
M LD LPLE++ Y +T ++ + +T +LL H+Q+VCIVYACLAVKRNAGI+ ++K AAA +GY++IAVPGFF+W ++N D L WLT E
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISMLRDRSSGLTDAKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAPQGYKDIAVPGFFKWLQENLDKEDFFLQLWLTFE 105
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JJR6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR6_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.450e-23 Identity = 52/104 (50.00%), Postives = 68/104 (65.38%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNED--ITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVE 294
M LD LPLE++ Y +T + L D +T +LL H+Q+VCIVYACLAVKRNAGI+ ++K AA AKGY++IAVPGFF+W ++N WLT E
Sbjct: 4 MKLDGVQSLPLEFNSYAETVISM-LRDKRSSGLTDTKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAVAKGYKDIAVPGFFKWLKENLEADQYFSQPWLTFE 106
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JF32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF32_9PHAE) HSP 1 Score: 95.5 bits (236), Expect = 3.040e-23 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVE 294
M LD LPL+++ Y +T ++ + +T +LL +Q+VCIVYACLAVKRNAG++ ++K A AA+GY++IAVPGFF+W ++N D L WLT E
Sbjct: 4 MKLDGVQSLPLKFNSYAETVISMLRDRSSGLTDAKLLKPLQNVCIVYACLAVKRNAGMVFTQAKHATAAQGYKDIAVPGFFKWLQENLDKEDFFLQPWLTFE 105
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5K889_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K889_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 1.130e-21 Identity = 43/86 (50.00%), Postives = 62/86 (72.09%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARD 258
M LD L LE++ Y +T ++ + +T +LL H+Q+VCIVYACLAVKRNAGI+ ++K AAA +GY++IAVPGFF+W ++
Sbjct: 4 MKLDGVQSLSLEFNSYAETVISMLRDRSSGLTDAKLLKHLQNVCIVYACLAVKRNAGIVSTQAKHAAAVQGYKDIAVPGFFKWLQE 89
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JGS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 6.580e-21 Identity = 47/85 (55.29%), Postives = 62/85 (72.94%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWAR 255
M +D LPLE + YV+ L+L +++ +LL H+QSVCIVYACLAVKRNAGI+ E+K AAAKGY++IAVPGF++W R
Sbjct: 4 MKIDHVQRLPLELNGYVEGTLDLLLGGGNGLSKIKLLKHLQSVCIVYACLAVKRNAGIVSMEAKHKAAAKGYKDIAVPGFYKWLR 88
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Match: A0A6H5JPS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPS0_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 1.310e-20 Identity = 49/102 (48.04%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 1 MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLAVKRNAGILDKESKLAAAAKGYEEIAVPGFFRWARDN----DIVLPAWLTVE 294
M LD LPLE++ Y +T ++ + +T +LL H+Q+ IVYACLAVKRNAGI+ ++K AAAA+GY++IAVP FF+W ++N D L WLT E
Sbjct: 400 MKLDGVQSLPLEFNSYAETVVSMLRDRSSGLTDAKLLKHLQNGRIVYACLAVKRNAGIVSTQAKHAAAAQGYKDIAVPSFFKWLQENLDKEDSFLQPWLTFE 501 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1378.11.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1378.11.1 >prot_P-littoralis_Contig1378.11.1 ID=prot_P-littoralis_Contig1378.11.1|Name=mRNA_P-littoralis_Contig1378.11.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=99bp MNLDETLPLPLEYSEYVKTAAKLVLLDNEDITQKQLLIHMQSVCIVYACLback to top mRNA from alignment at P-littoralis_Contig1378:16807..17103- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig1378.11.1 ID=mRNA_P-littoralis_Contig1378.11.1|Name=mRNA_P-littoralis_Contig1378.11.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig1378:16807..17103- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig1378:16807..17103- >mRNA_P-littoralis_Contig1378.11.1 ID=mRNA_P-littoralis_Contig1378.11.1|Name=mRNA_P-littoralis_Contig1378.11.1|organism=Pylaiella littoralis U1_48|type=CDS|length=297bp|location=Sequence derived from alignment at P-littoralis_Contig1378:16807..17103- (Pylaiella littoralis U1_48)back to top |