prot_P-littoralis_Contig1372.3.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig1372.3.1
Unique Nameprot_P-littoralis_Contig1372.3.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length86
Homology
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: D8LL58_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL58_ECTSI)

HSP 1 Score: 75.5 bits (184), Expect = 5.120e-14
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 0
Query:   21 AVSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLL 68
            AV   F  QGK+AEAE LY+RCQAI E+ALGPEHPS+ATTLH RAGL+
Sbjct:  646 AVGRLFELQGKFAEAEELYDRCQAINEEALGPEHPSVATTLHGRAGLM 693          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 2.390e-13
Identity = 37/69 (53.62%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    5 ALDHSSTTAFTGLDDTAVSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQLQ 73
            AL+    T        +V F F  QGKYAEAE LYER QAI+E  LGPEHP + T+L+NRA LLE+Q++
Sbjct:  636 ALESCEATEAVARSYWSVGFLFNIQGKYAEAEPLYERSQAIQENVLGPEHPDVGTSLNNRALLLEKQVR 704          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5KHN5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHN5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.610e-13
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 0
Query:   29 QGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLL 68
            +GKYAEAEALY +CQAIEEK LGPEHPSLATTLHN A LL
Sbjct: 1764 KGKYAEAEALYAQCQAIEEKVLGPEHPSLATTLHNLADLL 1803          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5K5H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.240e-12
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:   29 QGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQ 71
            QGKYAEAE LYER QAI E ALGPEHP++AT L+NRAGLLE+Q
Sbjct:   30 QGKYAEAEPLYERWQAIFETALGPEHPNVATALNNRAGLLEDQ 72          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5JJK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 2.160e-12
Identity = 33/43 (76.74%), Postives = 37/43 (86.05%), Query Frame = 0
Query:   29 QGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQ 71
            +GKY +AE LYERCQAI EK LGPEHP +ATTL+NRAGLLE Q
Sbjct:  940 KGKYTDAEPLYERCQAIYEKRLGPEHPYVATTLNNRAGLLEAQ 982          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 2.170e-12
Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 0
Query:   21 AVSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLE 69
            +V F F  QGKYAEAE LYER  AI+EK LGPEHP +AT+L NRA LLE
Sbjct:  685 SVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASLLE 733          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5JUC1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC1_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 7.300e-12
Identity = 41/78 (52.56%), Postives = 50/78 (64.10%), Query Frame = 0
Query:   12 TAFTGLDDTAVSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQ----LQFIAGAPSAFLLT 85
            T FT   D++  +    QGKY+EAE LY+RCQA++ KALGPEHPSLA TL+NRA LL  Q     Q +A   S   LT
Sbjct:  170 TIFTLKHDSS-RYPHCIQGKYSEAEPLYDRCQAMKGKALGPEHPSLAATLNNRAELLRAQGGVVEQLLARCQSPLALT 246          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: D7FXH0_ECTSI (Tetratricopeptide repeat containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXH0_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 3.580e-11
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0
Query:   29 QGKYAEAEALYERCQAIEEKALGPEHPSLATTLH 62
            QGKYAEAEALY RCQAIEEK LGPEHPSLA+TLH
Sbjct:  339 QGKYAEAEALYVRCQAIEEKVLGPEHPSLASTLH 372          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5K3K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K8_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.020e-10
Identity = 30/51 (58.82%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   22 VSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQL 72
            V   F  QGKY EAE LYER QAI+EK LG EHP +A++L+NR  LL  Q+
Sbjct:   11 VGLLFDIQGKYMEAEPLYERSQAIQEKVLGLEHPDVASSLNNRVELLRAQV 61          
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 8.090e-10
Identity = 32/53 (60.38%), Postives = 37/53 (69.81%), Query Frame = 0
Query:   19 DTAVSFSFRFQGKYAEAEALYERCQAIEEKALGPEHPSLATTLHNRAGLLEEQ 71
            D  V+     QG+YAEAE LY R   I E+ALGPEHP +AT L+NRAGLLE Q
Sbjct:  647 DDFVTLPTYIQGEYAEAEPLYARATEIWERALGPEHPLVATALNNRAGLLERQ 699          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1372.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL58_ECTSI5.120e-1472.92NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KXS7_9PHAE2.390e-1353.62NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KHN5_9PHAE8.610e-1385.00CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K5H9_9PHAE1.240e-1279.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJK0_9PHAE2.160e-1276.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G722_ECTSI2.170e-1269.39NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5JUC1_9PHAE7.300e-1252.56Reverse transcriptase Ty1/copia-type domain-contai... [more]
D7FXH0_ECTSI3.580e-1191.18Tetratricopeptide repeat containing protein n=1 Ta... [more]
A0A6H5K3K8_9PHAE1.020e-1058.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KU94_9PHAE8.090e-1060.38NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 6..78
e-value: 1.2E-13
score: 52.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 25..71
NoneNo IPR availablePFAMPF13424TPR_12coord: 26..71
e-value: 1.3E-10
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1372contigP-littoralis_Contig1372:6845..9847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1372.3.1mRNA_P-littoralis_Contig1372.3.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig1372 5437..10183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig1372.3.1 ID=prot_P-littoralis_Contig1372.3.1|Name=mRNA_P-littoralis_Contig1372.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=86bp
MICPALDHSSTTAFTGLDDTAVSFSFRFQGKYAEAEALYERCQAIEEKAL
GPEHPSLATTLHNRAGLLEEQLQFIAGAPSAFLLT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf