|
|
Homology
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A8C0H5F5_CHEAB (HECT-type E3 ubiquitin transferase n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=A0A8C0H5F5_CHEAB) HSP 1 Score: 67.4 bits (163), Expect = 3.540e-9 Identity = 45/154 (29.22%), Postives = 75/154 (48.70%), Query Frame = 1
Query: 55 RKKPEDPGAPLPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYGDDLNEINVESRVA-----PVALSVETMDEPCTTRRSSSSHTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAEDRLEHGRRPSTRSSTSSTAS 501
+++ E P PLP GWE R+ +T YVNH +++TQWK+P+ D+ D I++E++ A + E +D + + T LP GW + + G + Y++ + T+W T E S+ GR+P T S +S +S
Sbjct: 64 QQQQESP--PLPPGWEERQDILGRTYYVNHESRRTQWKRPTAQDNLADVDNGNIHLEAQHAFTHRRQITEEAENLDNRDSPEVKTLLSTSSGLPPGWEERQDEKGRSYYIDHNSRTTTW----TTIETSQLSTVQSTPTGRQPQTSSDSSEQSS 211
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A3Q2Y287_HIPCM (E3 ubiquitin-protein ligase n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2Y287_HIPCM) HSP 1 Score: 63.2 bits (152), Expect = 9.700e-8 Identity = 37/141 (26.24%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ IN AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 132 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPINTNGATPTAALPPNDDDQRAQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 272
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: UPI000CEAB42E (E3 ubiquitin-protein ligase SMURF2-like n=1 Tax=Salvelinus alpinus TaxID=8036 RepID=UPI000CEAB42E) HSP 1 Score: 59.7 bits (143), Expect = 2.280e-7 Identity = 34/128 (26.56%), Postives = 58/128 (45.31%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPP 405
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I + P V + D+ RR S HTP +LP G+ + T+ G+ +++ +++W P
Sbjct: 43 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCVPSSDQRAQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDP 170
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A6B2ELN4_9DIPT (HECT-type E3 ubiquitin transferase n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2ELN4_9DIPT) HSP 1 Score: 62.0 bits (149), Expect = 2.550e-7 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 1
Query: 10 GFVSTACSLVGNMLRRKKPEDPGAPLPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYGDDL 207
G S + + + KKP +P A LPEGWE RK + YVNHVTK TQW +P+ + D++
Sbjct: 173 GVTSVPAAAIQAGVPAKKPREPEADLPEGWELRKTPQGRVYYVNHVTKSTQWDRPTAPATGVVDEV 238
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A671TY17_SPAAU (E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671TY17_SPAAU) HSP 1 Score: 61.6 bits (148), Expect = 3.170e-7 Identity = 36/141 (25.53%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I+ AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 144 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPTSGGDQRAQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 284
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A673BMV0_9TELE (E3 ubiquitin-protein ligase n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673BMV0_9TELE) HSP 1 Score: 61.6 bits (148), Expect = 3.190e-7 Identity = 36/141 (25.53%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I+ AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 147 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPASDGDQRAHERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 287
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A671TZC4_SPAAU (E3 ubiquitin-protein ligase n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671TZC4_SPAAU) HSP 1 Score: 61.6 bits (148), Expect = 3.210e-7 Identity = 36/141 (25.53%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I+ AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 159 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPTSGGDQRAQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 299
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A673BMN9_9TELE (E3 ubiquitin-protein ligase n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A673BMN9_9TELE) HSP 1 Score: 61.6 bits (148), Expect = 3.220e-7 Identity = 36/141 (25.53%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I+ AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 165 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPASDGDQRAHERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 305
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: D8LMI8_ECTSI (Similar to neural cell expressed, developmentally down-regulated 4 isoform 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI8_ECTSI) HSP 1 Score: 61.6 bits (148), Expect = 3.350e-7 Identity = 62/173 (35.84%), Postives = 77/173 (44.51%), Query Frame = 1
Query: 46 MLRRK-KPEDPGAPLPEGWEARKIDGRKTVYVNHVTKKTQWKKP-----SISDSSYGDDLNEINVESRVAPVALSVETMDEPCTTRRSSSSHTPE---ELPYGWRKDVTKDGETVYVNDIEKITSWDP-------PVMTAE--ASKDGAEDRLEH-----GRRPSTRSSTSST 495
M R K +PE LPEGWE + K YVNHVTK TQW+KP S S G N + VE AP+ V +D P R SSS PE + R+ + + +D TS +P P T + K + R + GRRPSTRSS SST
Sbjct: 1 MFREKPRPET----LPEGWEVKTTTTGKVFYVNHVTKATQWEKPKQPKPSTRGRSNG---NSVVVEPSAAPIERYVAKVDGPA--RASSSRREPEGGLDTKQRQRQQSQQARPSSSSHDALNRTSVEPSAAPAGRPAATVDRRGRKSSSTSRAQREDVPDGRRPSTRSSNSST 164
BLAST of mRNA_P-littoralis_Contig1371.1.3 vs. uniprot
Match: A0A4W6BPQ6_LATCA (E3 ubiquitin-protein ligase n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6BPQ6_LATCA) HSP 1 Score: 61.2 bits (147), Expect = 4.270e-7 Identity = 36/141 (25.53%), Postives = 62/141 (43.97%), Query Frame = 1
Query: 85 LPEGWEARKIDGRKTVYVNHVTKKTQWKKPSISDSSYG----------DDLNEINVESRVAPVALSVETMDEPCTTRRSSSS-----------HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAED 444
LP+GWE R+ + Y+NH+T+ TQW++P+ S Y D+ I+ AL D+ RR S HTP +LP G+ + T+ G+ +++ +++W P + + S E+
Sbjct: 136 LPDGWEERRTASGRIQYLNHITRTTQWERPTRPASEYSSPGRPLSCIVDENTPISTNGATPTTALPPSDGDQRAQERRVRSQRHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEE 276
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Seed ortholog | 7029.ACYPI003364-PA |
| Preferred name | YAP1 |
| PFAMs | WW |
| Model size | 757 |
| Max annot lvl | 33208|Metazoa |
| KEGG ko | ko:K16687 |
| KEGG Pathway | ko04390,ko04391,ko04392,map04390,map04391,map04392 |
| KEGG Module | M00683 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0000785,GO:0000902,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0000988,GO:0000989,GO:0001012,GO:0001067,GO:0001076,GO:0001101,GO:0001501,GO:0001568,GO:0001570,GO:0001654,GO:0001655,GO:0001667,GO:0001708,GO:0001763,GO:0001822,GO:0001894,GO:0001944,GO:0002009,GO:0002011,GO:0002064,GO:0002065,GO:0002066,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003015,GO:0003143,GO:0003401,GO:0003406,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003712,GO:0003713,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006928,GO:0006950,GO:0006974,GO:0006975,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007423,GO:0007492,GO:0007498,GO:0007507,GO:0008022,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008284,GO:0008544,GO:0009058,GO:0009059,GO:0009314,GO:0009611,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009790,GO:0009798,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009913,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010212,GO:0010332,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010837,GO:0010941,GO:0014013,GO:0014015,GO:0014070,GO:0016020,GO:0016043,GO:0016070,GO:0016202,GO:0016310,GO:0016477,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030030,GO:0030031,GO:0030097,GO:0030111,GO:0030154,GO:0030177,GO:0030216,GO:0030323,GO:0030324,GO:0030518,GO:0030522,GO:0030707,GO:0030855,GO:0030856,GO:0030857,GO:0030903,GO:0031016,GO:0031056,GO:0031058,GO:0031060,GO:0031062,GO:0031099,GO:0031101,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032570,GO:0032774,GO:0032870,GO:0032989,GO:0032991,GO:0033043,GO:0033044,GO:0033143,GO:0033145,GO:0033146,GO:0033148,GO:0033554,GO:0033613,GO:0033993,GO:0034641,GO:0034645,GO:0034654,GO:0035019,GO:0035050,GO:0035162,GO:0035212,GO:0035239,GO:0035295,GO:0035329,GO:0035556,GO:0036211,GO:0039022,GO:0040007,GO:0040008,GO:0040011,GO:0042060,GO:0042127,GO:0042221,GO:0042246,GO:0042493,GO:0042592,GO:0042981,GO:0043010,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043401,GO:0043412,GO:0043565,GO:0043588,GO:0043933,GO:0044085,GO:0044093,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044782,GO:0044798,GO:0045165,GO:0045595,GO:0045596,GO:0045597,GO:0045844,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046620,GO:0046622,GO:0046982,GO:0046983,GO:0048339,GO:0048368,GO:0048468,GO:0048477,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048585,GO:0048589,GO:0048598,GO:0048609,GO:0048634,GO:0048636,GO:0048638,GO:0048639,GO:0048645,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048754,GO:0048793,GO:0048856,GO:0048869,GO:0048870,GO:0048871,GO:0048880,GO:0048881,GO:0048882,GO:0048915,GO:0048916,GO:0048925,GO:0050678,GO:0050767,GO:0050769,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050847,GO:0050896,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051216,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051254,GO:0051340,GO:0051351,GO:0051569,GO:0051571,GO:0051674,GO:0051704,GO:0051716,GO:0051960,GO:0051962,GO:0055021,GO:0055023,GO:0055024,GO:0055025,GO:0060041,GO:0060043,GO:0060045,GO:0060242,GO:0060249,GO:0060251,GO:0060252,GO:0060255,GO:0060271,GO:0060284,GO:0060322,GO:0060420,GO:0060421,GO:0060425,GO:0060428,GO:0060429,GO:0060441,GO:0060449,GO:0060479,GO:0060485,GO:0060487,GO:0060541,GO:0060548,GO:0060560,GO:0060562,GO:0060602,GO:0060828,GO:0060914,GO:0061026,GO:0061138,GO:0061448,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070064,GO:0070887,GO:0070925,GO:0071148,GO:0071149,GO:0071214,GO:0071229,GO:0071300,GO:0071310,GO:0071383,GO:0071396,GO:0071407,GO:0071478,GO:0071479,GO:0071480,GO:0071495,GO:0071704,GO:0071840,GO:0072001,GO:0072073,GO:0072089,GO:0072091,GO:0072176,GO:0072182,GO:0072215,GO:0072307,GO:0072358,GO:0072359,GO:0080090,GO:0090130,GO:0090132,GO:0090183,GO:0090263,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0098727,GO:0104004,GO:0120031,GO:0120036,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901532,GO:1901564,GO:1901576,GO:1901654,GO:1901700,GO:1901701,GO:1901861,GO:1901863,GO:1902036,GO:1902275,GO:1902459,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1905269,GO:1905435,GO:1905437,GO:1905478,GO:1905480,GO:1990837,GO:2000026,GO:2000036,GO:2000112,GO:2000696,GO:2000736,GO:2000737,GO:2001141,GO:2001233,GO:2001234,GO:2001236,GO:2001237,GO:2001252 |
| Exons | 5 |
| Evalue | 1.12e-10 |
| EggNOG OGs | COG5021@1|root,KOG0940@2759|Eukaryota,38D6U@33154|Opisthokonta,3BCXM@33208|Metazoa,3CY7W@33213|Bilateria,41VPT@6656|Arthropoda,3SGBN@50557|Insecta,3EATY@33342|Paraneoptera |
| Description | Domain with 2 conserved Trp (W) residues |
| Cds size | 756 |
| COG category | O |
| BRITE | ko00000,ko00001,ko00002 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789634.5476682-CDS-P-littoralis_Contig1371:9132..9431 | 1680789634.5476682-CDS-P-littoralis_Contig1371:9132..9431 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1371 9133..9431 - |
| 1680789634.5621214-CDS-P-littoralis_Contig1371:9730..9862 | 1680789634.5621214-CDS-P-littoralis_Contig1371:9730..9862 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1371 9731..9862 - |
| 1680789634.5705428-CDS-P-littoralis_Contig1371:10959..11131 | 1680789634.5705428-CDS-P-littoralis_Contig1371:10959..11131 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1371 10960..11131 - |
| 1680789634.580288-CDS-P-littoralis_Contig1371:11894..11953 | 1680789634.580288-CDS-P-littoralis_Contig1371:11894..11953 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1371 11895..11953 - |
| 1680789634.589608-CDS-P-littoralis_Contig1371:13192..13286 | 1680789634.589608-CDS-P-littoralis_Contig1371:13192..13286 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig1371 13193..13286 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig1371.1.3 >prot_P-littoralis_Contig1371.1.3 ID=prot_P-littoralis_Contig1371.1.3|Name=mRNA_P-littoralis_Contig1371.1.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp
DYRGFVSTACSLVGNMLRRKKPEDPGAPLPEGWEARKIDGRKTVYVNHVT
KKTQWKKPSISDSSYGDDLNEINVESRVAPVALSVETMDEPCTTRRSSSS
HTPEELPYGWRKDVTKDGETVYVNDIEKITSWDPPVMTAEASKDGAEDRL
EHGRRPSTRSSTSSTASYDGNSSNRSGGGGGGGRTQKKTPTTARMDPDRK
KTPTTARMKPNPNPTGNSSSSRAAAATAAAAGETTRVVTGNKQSNTTSTS
RQ back to topmRNA from alignment at P-littoralis_Contig1371:9132..13286- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig1371.1.3 ID=mRNA_P-littoralis_Contig1371.1.3|Name=mRNA_P-littoralis_Contig1371.1.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4155bp|location=Sequence derived from alignment at P-littoralis_Contig1371:9132..13286- (Pylaiella littoralis U1_48)
GACTACAGAGGATTCGTGAGCACCGCTTGTTCATTGGTGGGAAACATGTT
AAGGAGAAAGAAGCCGGAAGACCCGGGAGCACCCCTTCCCGAAGGTGAGA
GACGACCACACTACTTGAAACCTCCCACCGCTGCTTTGATTCATTTTCTT
ACACCTAGTACGGAGAGCTTCTCCACGGAGTATTCTTTGTTCAGATCTAT
CTGGCGAGTATACATAGAGAGTTATCACCATAAGAACGCACCGTAGTATT
TTGTTTGCCTCTATCCATGTAGCGTTGAAGAGTACTGGTAAGTATATTGT
ACAACAGTACTTCGCACCATTCATGGCATGAAGATAATGCGCAAGATGCC
CAAAAGCTCTCATCCACATATCAAAAGAGTTCGTTCACACACACGCACAT
CTCACAATATCACCTCAACACCCAAACCAAACTTTATTCCCAGACTTGAC
TGGACTACAGTATGCGGAAATTTCTCCAATGTTCGTGATTGTTGCGATTG
CGGCATCATCGTCCTGACTTGTGATGTCTGGACGGTTGGGTATATCATTT
CATCCTCACGGATGCGCCTTAGCGGTAGCTGTTCCCATAGCGGCGATGTT
GTACATGTCGTCTGTGATCAGATATATTTCCATGCAACTGCATACAGACA
CTTAAGTCACCCCCGTTACTTTTGTATTGTTTTTTTTCAAGTCTTTGTTT
CTGTGTTTTCCATTTTTTGGCCATGACAGAAAGTACCTCCTTATTTGGGC
GGTATCCATGCATGCCTGTTTTTTCTTTTTGGGTACATGGCCTTATTTTA
CGCTGTTATTTGTTTCAGTTGTCCTTCTAGTACGATGTGTGCCTAGTTTG
TGACCACGGGCGAGACAACAACCTTGAGAAAATGTGAAAAACAACAACAA
CAACAACAACAACAACAACAACAACGACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAT
AATAATACACGCACATTCCATCTCGAGAGAGCTGATCCGTGGTCGATCGT
GAATGCCTACAGCAAAAAGGCGATCAAGATCAAAATGTCAACCTGAGCTA
TGTTGACCACAAAATACCTTTACACTAATATATTTTTCGAAAAAAATAAA
TTGCTGCACCCCGACAAAAGTTGCGCAGTAGTTCATACAACATGCATGCA
AAACTTCGGGGTCTAACTCGAAAAAAACGCGCGATAAAACGATGTTGAAT
ACATTACTTTCTTCTTGCGTGAATCAGCCTGTTCAAGTCCGTCCAAAAAA
ATCCCCTTTGCATCGTACCGTGTGGATGTTCAGGCTGGGAGGCACGGAAG
ATCGACGGCAGAAAAACGGTGTACGTGAACCACGTGACAAAGGTGTGAAC
CTGTGTTTTATTCCATTTTGCTGTTGGTGTGTCGTTGTGATGCTCGCACT
AAGTCACCGCCAAAATGTAGCCCGTTGTCACCAACCAGAGGGAAGGCATC
GTGTTCAGAGCAATAAGCAAAGAAAAACAAGGCCAAACACGAAGCGAGTA
GCTCTGTGGTGGCTGAACAAACAGATACAGACTAACACAAGTATCAACAA
GCCCTGTTTCTGTGCGTGTGTATTTGGCATCATTTACGGTATTCTGGACG
CCGGGCTAAACCGTGCGGTAAAGTTGAGCATACCAGCCGGGGTCACACAG
GGGGAAGGTAAACACACTAGTGTGTTTTTTTCTTGTTTTGCGATTGAGTT
GTCATTGATGTTCGTGCATATCTCGGTCGCGAACAGTCCCTGCTGCTGCG
CATCGCCTTCAATGAGCTTACTGCTGTACTGAAGAGATGGCCATTAGCGG
CAACACAAGGGAAACGACCACGAAAACAGTATGACCACCTGCCTATTTCC
TTTTGCCGGTTTAACTGATCGATCGGTAAGGTAGTATGATTTGTATGGCT
TTATTTCGCTTGCCAAGAAGCCAGAACTTGTTGCGTCCACGTTAACTCTG
TACACTGGGTTTGGCATGGCATAAAAATAAACAAATGACGAAAATGACTT
AGTACAACAATCAATCGCCACGTTGAGGACACCAACCAAAACAAAAATGC
GGGCACCGCCAACAACAACAACTACGCGACAACGAACTGCACCACCCGCG
CACAGAAAACGCAATGGAAAAAGCCGAGCATTTCGGACTCTTCTTACGGC
GACGATCTCAACGAAATCAACGTGGAGTCCCGCGTTGCGCCCGTGGCCTT
GAGCGTGGAAACGATGGATGAGCCTTGCACTACCAGGAGGAGCTCGTCGA
GCCACACGCCGGAAGAACTCCCCTACGGTGCGCTACAGTATCGCAGGGTA
GCTGTTGGCGAATACCTACGATATCACCTTTCTTCCCTTTGGTCTTTTTT
CTCTTTTCGTCGCACATTGATTACACGTTTATGTTTGTGGCTAGCTCCTG
ACCACCGGCCAACCGATATGATATGTATTCAGATGTTTGCGACGAGCTAC
CTTGAGAATCAACAAGAACAGGAACAGCAACCTTGCTGTATTTTTATTTG
ATGCTTATGTTAATTTGTTTTTTGAGCAGGGTGGAGGAAGGACGTGACGA
AAGACGGAGAAACGCTTTACGTCAACGACATCGAAAAAATAACATCCTGG
GATCCTCCGGTCATGACCGCCGCAGCCCCCAAGCACGGTGCCGAAGTCCA
TTTGGAACACGGTGAGAGCCGACAACGCCCCCCAATGGATGACGTTCGGC
ATCATCCCCGCTAGTGCCCGAACGAAGCTTCCGCTTGGGACAGTCCTGGT
CGCCTCTGCTTTTCCTCACACCTCTACTTAAGTCAGTCACAAACTAGGAT
TACATAGCGTGAGGGCCTACTTGCATACTAAAACGCCATTGCTTGGGGTT
CTTCGTGATTACGTGCGTGCGTTTGATTATTATTTGTTATCTGTGTTTTG
TGTCTATTAATATACTCACGATACTGTACGTGTGCGACTTTTTTTGAGCA
GGGTGGAGGAAGGACGTGACGAAAGATGGAGAAACGGTTTACGTCAACGA
CATCGAAAAAATAACATCCTGAGATCCTCCGGTCATGACCGCCGCAGCCC
CCAAGCACGGTGCCGAAGTCCGTTTAGAACACGGTGAGAGCCGACAACGC
CCCCCAAATAGATGACGTTCGGCATCATCCCCGCTAGTGCCCGAACGAAG
CTTCGGCTTGGGACAGTCCTGGTCGCCTCTGCTTTTCCTCACACCTCTAC
TTAAGTCAGTCACAAACTAGGATTACATAGCGTGAGGGCCTGCTTGCATA
CTAAAACGCCATTGCTTGGTTTTCTTCGTGATTACGTGCGTGCGTTTGAT
TGTTATTTGTCATCTGTGTTTTGTGTCTATTAATATACTCACGATACTGT
ACGTGTGCGACTTTTTTTGAACAGGGTGGAGGAAGGACGTGACGAAAGAC
GGAGAAACGGTTTACGTCAACGACATCGAAAAAATAACATCCTGGGATCC
TCCGGTCATGACCGCCGAAGCCTCCAAGGACGGCGCCGAAGACCGTTTGG
AACACGGTGAGAGCCGGCAACGCCCCCCAATGGATAACGTTCGGTATCAT
CCCCGCTAGTGCCCGAACGTAGCGTCCGCTTGGGACACTCCTGGTCGCCT
CTGCCTTTCCTCACACCTCTACTTACGTCAGTCACAAACTAGGATTACAT
AGCGTGAGGGCCTGCTTGCATACTAAAACGCCATTGCTTGGTTTTCTTCG
TGATTACGTGCGTGCGTTTGATTCTTTTTGTCATCTGTGTTTTGTGTCTA
TTACTATACTCACGATACTGTACGTGTGCGACTTTCGGCGATGTATGTTT
GACAGGACGGAGACCGTCGACCCGCAGCAGCACCTCTTCCACCGCCAGCT
ACGACGGCAACAGCAGCAACAGGAGCGGCGGTGGCGGCGGCGGTGGTAGG
ACACAGAAGAAGACACCCACGACGGCCAGAATGGACCCCGATCGGAAGAA
GACTCCCACGACGGCCAGAATGAAACCTAACCCTAACCCTACCGGCAACA
GCAGCAGCTCTAGGGCCGCCGCCGCCACCGCCGCCGCCGCCGGCGAAACC
ACTCGCGTTGTCACCGGCAACAAACAAAGCAACACCACCAGCACCAGCCG
CCAAG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig1371:9132..13286- >mRNA_P-littoralis_Contig1371.1.3 ID=mRNA_P-littoralis_Contig1371.1.3|Name=mRNA_P-littoralis_Contig1371.1.3|organism=Pylaiella littoralis U1_48|type=CDS|length=756bp|location=Sequence derived from alignment at P-littoralis_Contig1371:9132..13286- (Pylaiella littoralis U1_48)
GACTACAGAGGATTCGTGAGCACCGCTTGTTCATTGGTGGGAAACATGTT
AAGGAGAAAGAAGCCGGAAGACCCGGGAGCACCCCTTCCCGAAGGCTGGG
AGGCACGGAAGATCGACGGCAGAAAAACGGTGTACGTGAACCACGTGACA
AAGAAAACGCAATGGAAAAAGCCGAGCATTTCGGACTCTTCTTACGGCGA
CGATCTCAACGAAATCAACGTGGAGTCCCGCGTTGCGCCCGTGGCCTTGA
GCGTGGAAACGATGGATGAGCCTTGCACTACCAGGAGGAGCTCGTCGAGC
CACACGCCGGAAGAACTCCCCTACGGGTGGAGGAAGGACGTGACGAAAGA
CGGAGAAACGGTTTACGTCAACGACATCGAAAAAATAACATCCTGGGATC
CTCCGGTCATGACCGCCGAAGCCTCCAAGGACGGCGCCGAAGACCGTTTG
GAACACGGACGGAGACCGTCGACCCGCAGCAGCACCTCTTCCACCGCCAG
CTACGACGGCAACAGCAGCAACAGGAGCGGCGGTGGCGGCGGCGGTGGTA
GGACACAGAAGAAGACACCCACGACGGCCAGAATGGACCCCGATCGGAAG
AAGACTCCCACGACGGCCAGAATGAAACCTAACCCTAACCCTACCGGCAA
CAGCAGCAGCTCTAGGGCCGCCGCCGCCACCGCCGCCGCCGCCGGCGAAA
CCACTCGCGTTGTCACCGGCAACAAACAAAGCAACACCACCAGCACCAGC
CGCCAA back to top
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