mRNA_P-littoralis_Contig1005.3.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1005.3.1
Unique NamemRNA_P-littoralis_Contig1005.3.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A6H5L5H7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5H7_9PHAE)

HSP 1 Score: 1289 bits (3335), Expect = 0.000e+0
Identity = 671/1130 (59.38%), Postives = 814/1130 (72.04%), Query Frame = 1
Query:    1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHRLCLCAVRGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAAT------------------------------------PAGF-------------PVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELP----------------------------DNRLSRSRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            LK+ TLN+NGV++KK  L+R+L    ++CIALQETTLT TDWALN+PGYRTF VYGERT STRG AIL++N +GAQT+           + +  H    C      GK PLRT+R+Q+R LR ++P DSI+LMGDFNR+R  V++W       I+V EL  KDA+LGTR+HGSKR IDH+++ +AHP+D LR PRV+RKVDISDHYP+VSTFRSDRADA+T                                    P G              P+AD I EG  +L   D  A+ DAAA+RMV+ + QVA+    TK    +R PALK  IARAIDDRG++YR A++ R +      AW  Y E +  AERLVR+DRR+ WTKAL TAS Q+R+DPKA W F S VAGWKRKD+  GLQPV+HPD+  L+T A DISA+W+THY+RLA+DVTGNSR  D+W  W AAPQR H+  LD PI   E+ EAL R+KRHK+ G DG+PADFL+LA G+ G++SPM K +LG+LNL+WK ++IP + ++STVV IPKKGD+ DMNN+RGISLM+TVLKVLVMIISTRLN  FE H LFS +QAGFR +EECVTQAACLLEI QRRK +RK+ +LMFVDLKKAYDTVP EALFAKL FYGVRG ML FIR LYANS+I+VRTGDL S++F L+RGVRQGCPLSPVLFNIFINDILDG E+LGVP  GN +ER  R+ GLLFADDLV I+ TR +LA + D ++ W+ ENEMSAGIHKCGVMAIG   RRL   PDRWKLAG  LPIV  YTYLGL FNR+LDVEVMMGNKLAAG ++V+ M P+L CRQIPVP++VAVVRGVILPRLLFGAEV+GMR +IT+R+Q+ +N+A+R+VAG+   A VS+VALWREL+IPPICASAAARRAR +QKAS +KTW+A+++  P+KHR+WTW TGT RWMNRY HRLA    D+LP                            + R++ S+TA  Y                GHA L EGLA IIRCR+GGFWGAGRLSRR ++HPRY  +CPCC    EE LAHVLFDC  W E R+ LL  LIA A+ I+GSA+SG  ++KVALLLGGK
Sbjct:   33 LKVATLNINGVKSKKIQLQRVLAMYRINCIALQETTLTVTDWALNVPGYRTFAVYGERTSSTRGAAILLRNKMGAQTVG----------KSSPWHTFVRCYG---LGKVPLRTVRNQMRDLRVKYPNDSIILMGDFNRLRPRVEQWFNCAYESIRVWELTGKDADLGTRDHGSKRVIDHIMTSLAHPQDTLRAPRVLRKVDISDHYPVVSTFRSDRADASTGDSVGVPINARTIQRGERINTGLIPMPGTHWYQESGPRGRANHQKVIHANYWEPLADLIEEGNEELSPEDTTALVDAAASRMVEASHQVARECGQTKDSSTQRAPALKPQIARAIDDRGRLYRAAKRLRKNSPRAKVAWERYHEARMKAERLVRKDRRRAWTKALCTASEQLRSDPKAAWHFMSAVAGWKRKDSSGGLQPVQHPDSRALLTSANDISAAWRTHYQRLAADVTGNSRKSDKWNAWRAAPQRRHMTELDGPILREEMVEALARIKRHKSPGNDGVPADFLELAGGEEGSQSPMGKTVLGMLNLIWKTRVIPTDRRESTVVPIPKKGDMTDMNNHRGISLMNTVLKVLVMIISTRLNSAFERHKLFSQSQAGFRTREECVTQAACLLEICQRRKFRRKSAYLMFVDLKKAYDTVPQEALFAKLVFYGVRGEMLAFIRALYANSKIAVRTGDLLSDSFSLERGVRQGCPLSPVLFNIFINDILDGAESLGVPEVGNQLERAPRIPGLLFADDLVTISPTRAKLAAMDDHISVWMAENEMSAGIHKCGVMAIGHGRRRLRERPDRWKLAGETLPIVESYTYLGLEFNRRLDVEVMMGNKLAAGEKLVTLMTPYLLCRQIPVPLKVAVVRGVILPRLLFGAEVFGMRTSITNRLQVYVNRAYRMVAGMSPKATVSSVALWRELEIPPICASAAARRARTMQKASKLKTWIASIMAQPYKHRKWTWGTGTGRWMNRYSHRLAKATSDDLPAKMRRPGGWIKMNPQELSRCITAVVWEREERVAWSKTADDYKQMHFETNPLAAARAAGHATLEEGLALIIRCRVGGFWGAGRLSRRGMIHPRYKRMCPCCKRRVEEDLAHVLFDCPTWSEARNGLLAPLIAAANAIVGSADSGYGKKKVALLLGGK 1149          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A7S1SJ55_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SJ55_9CHLO)

HSP 1 Score: 445 bits (1144), Expect = 1.930e-135
Identity = 333/1005 (33.13%), Postives = 492/1005 (48.96%), Query Frame = 1
Query:  325 EPLRT-IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAEL---GTREHGSKRTIDHMVSMMAHPEDHLRRPRVI---RKVDISDHYPLVSTF--------------------------RSDRADAATPAGFPVADGI-----------------GEGEGDLDELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRR-ARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDP--KAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDV-TGNSRSPDQWVKWT----AAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGD---LFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGN----NVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTR--RLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAI-THRMQLQMNKAFRLVAGVGASA-AVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIH--------------------RLASWIPDELPDNRLSRSRTAA---W--YIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGR 3057
            EP R  +R +L +LRE+FP+D+IV+ GD+N    ++D  LRR         +  +DA     GT   GS R IDH V+        L  P  +      D SDH+P+ ++                           +  R D  +    P  D +                 G    + D +D  A AD     +  TA +V     V++ R     P L+ SI  AI  R   +    ++ RG    ++ A   Y   +   + +VR +RR+   +A+  A    R     + FWK++  +A      +    QPV  P +GVL T   +I+A W  HY  L  D      R+      W       P  P L  ++ PI   EL +AL RL  +KASG DG+ A+ LKLA      +SP  K+LL ++N +W  + +P++W  S VVSI KKGDV  M+NYRGIS+M  ++K+L+ +++ RL +  + + L    Q GF   EEC  Q A + +IA RR+     T+  F+DL+KAYDT+PHE LF+KL+  G+ G+ML F++ LY +S + V+TG+   + S+   ++RG+RQGCP SP+LFNIFINDI DG E LG  V G     +  +  RV G LFADD V +A + + L  +    ++W +++ M  G+ KCGVMA+G  +    L    DRW+L G  +P+V EY YLG + N  L +  ++G+++    R V A+   L  R IP+ +R +V++  ILP L +G EV+GM      +R+Q  +N+  R + GVGA A  V+   L REL I PI A AAA R RA  KA ++ T ++ +V  P + R  TW +GT RW++R+                      R+AS +       R   S +A    W  Y                  A    GL  +I+ R   F  A RL+R   +  R+L  CP C     E++ H+L +C RW   R
Sbjct:   23 EPYRCRLREELAQLREKFPRDTIVVGGDWNLDEAQLDALLRRWRCVPDAKTIWPRDASARVRGTCRRGSCRVIDHFVAWPPVMGPSLSFPHSVFVDYSWDTSDHFPVFASVPRLVGDSFEHPHPPLMLERLSVRSIPKPARGDPPSEWPTPFRDFVTANPFAILAPPNDEPMEGAMSREPDSID--ADADGFVQAVWSTARRVGA---VSRTRRKSLGPPLQRSILGAIARRRHAFLALCQEARGPI--QSVALDRYIAARLRVKNMVRTNRRRQKARAIDKAINDFRQGGGRRGFWKWARSIAKGHPTQSNRAEQPVHDPTSGVLHTEPGEINACWARHYRELLRDPHPAACRATIYHEAWERRRGGRPPSPALDGINGPIGGGELCKALKRLNNNKASGVDGITAETLKLAI--YAPDSPFGKSLLELMNNIWTTKCVPKQWCSSAVVSILKKGDVTVMDNYRGISIMGALIKLLMTVVTQRLQDVCQTNKLIRRWQGGFMPGEECPLQVASIFDIAGRRQALGLPTYAGFIDLRKAYDTIPHELLFSKLEANGITGHMLSFLKALYRDSTVQVKTGEAPGILSDPIPIERGLRQGCPASPILFNIFINDIFDGIEGLGCEVPGCVDMLDSRQPLRVPGQLFADDTVGLAPSLDNLHAMFAHFSQWAEDHYMGFGVKKCGVMALGRHSDVVALREQADRWQLGGERVPVVSEYRYLGALINSDLSMRNIVGDRVNKSRRAVEALDSVLGGRDIPINVRTSVLKTCILPVLTYGCEVWGMDSTSGVNRLQTILNQCLRRLVGVGAKAPGVATAPLLRELGIAPIEAMAAAARTRAFLKAPTLNTCISDLVRQPSRMRPNTWTSGTVRWLDRFARASAELAQNVRVPPAWRSLQPRVASNLVKAAVWGRFETSSSACTNTWSIYSQASYVGNPLPQYGTGIPAGAVAGLHIMIQLRTRVFPTARRLARIHAMPERFLHHCPACGGDVIESIEHILLECPRWEYHR 1018          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1YP44_9FUNG (LINE-1 retrotransposable element ORF2 protein (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YP44_9FUNG)

HSP 1 Score: 454 bits (1168), Expect = 6.100e-134
Identity = 344/1079 (31.88%), Postives = 522/1079 (48.38%), Query Frame = 1
Query:    1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHH----RLCLCAVRGRAGKEPLRTIRSQL---------RRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMVSMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTAFQVAK-----AHRVTKLREPKR--KPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTD-PKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            LK+ T N+ G  +K+  L  +L++     IALQET L A    L +  Y T           RGLA+ ++ G G     L      L A+I+  H    R  L  V       P +TIR +L         R++R++  +  I+L+GDFN+        L R    ++   +R      G+R +G+   R IDH ++    P +     +VI+ VD+SDH P+V+ +  +      P      + I E       ++R A+ D     + D A   A+     A  ++ ++E K+  K  L      AI  R K+++      G   N + +   Y   K+ A    R DRR      ++ A   M T+ P+  W +    +G   +   S +          L+TG  + S +W  H+E LA D TGNSRS ++W       +  +    D  +T  E+  AL     +K+ G DG+P++  KL   +    SP AK    ++N +W+ + IP++   S +V IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL++   +H++    QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+ G +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+LDG +  GV V G + E    + GLLFADD V +A +   L    ++LT W  + EM     KCG+M I  ST  L      + + G  +  V EY YLG+VFN K +    + N    G +   +M  FL  R IP  MR+A+VR V++P L +G E++GM       +Q   + A RLVAGVG S A+  +    EL I  I    +  R R   K +  KTW++ ++N P K+R  TW +GT RW  R++    S    +    R  R   S+   W +                +   A G+  + + R+G +  A  L+   L+   + T CP C  +E +T+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:  644 LKVMTYNIRGYISKREELDLVLKQNRPSVIALQETNLNAKTNRLRLQEYVTVESKSHLRAGGRGLALGIRKGSGLSISELIQTPHWLAAKISGAHENDKRFSLACVNLHM---PHQTIRRKLVIIGLTRFLRKMRQKKKKSKIMLIGDFNKDTESTISMLNRIGIGLRRATVRNSK---GSRMNGAVMGRMIDH-ITYSGFPNNPTYA-KVIKSVDLSDHLPVVAEWDMEALKIPAPQRKIDVERIKEVGVSFVSINRFAILDQLENDIEDLAENTAEEIWRAADELSCIKEEKQRFKTVLSKETLNAIQRRRKLFK------GISKNPSLS-EEYSNLKEKANEHCRADRRSNKVAEVKKARELMLTNKPRELWSWLKRYSG---RFLSSLIDGPIFDKNRKLVTGHEEKSEAWAAHFEELAKDSTGNSRSAEKWSNMGLGSEAVY-TECDAILTWTEICAALKSTPNNKSPGSDGIPSEVWKLVQNEEEPTSPFAKLFSKLVNKIWEDEKIPQKLDPSVIVPIPKKGDMRDPNNYRGISLIPTLSKVLSKIIARRLSKIDNKHDILVKEQAGFRSREECVAQATALYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKSSGIGGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLDGIK--GVKVPGIDTE----IPGLLFADDAVVLAESPAELQIALEKLTVWSLKWEMQINQEKCGIMGINSSTGML------FTIMGKPIKQVAEYKYLGVVFNDKWNNLSALKNNRDNGRKAFHSMYYFLSRRDIPTAMRIALVRTVLMPILCYGGEIFGMSATRAGALQKIADDAARLVAGVGRSTALQRIR--NELKIDEINTRVSVARERGHTKWAGSKTWISELINQPLKNRLDTWVSGTIRWKKRFLKGADSKTTAQALRARKIRNDHSKITQWVMKNNLGLTSNWMGLELAYPEHARGIRLMAKVRMGAYMTAKSLANSRLILEEFKTKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1688          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X7T5_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X7T5_9FUNG)

HSP 1 Score: 440 bits (1131), Expect = 2.170e-131
Identity = 330/1078 (30.61%), Postives = 520/1078 (48.24%), Query Frame = 1
Query:    1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHR---LCLCAV------RGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV--SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGE-GEGDLDELDRQAVADAA------ATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKW-TAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            LK+ T N+ G   K+  +  L ++     +ALQET L A    L + GY+T           RGLAI ++ G+G     +      + A IT   R   + L  +      +    K  +  +   LR+LR +  +D I+L GDFN+        L R    ++   +       G+R +G+   R IDH+    ++ +P       +V++ VD+SDH P+++ +  +  D+ T       + I E GE  +      A+ +         +R+    ++ A+     K+ +      L     +A + R K ++R     GD    T     Y + K+ +  L R DRR      ++ A    +    +  W +    +G  R     G  PV + D   L+T     +  W TH+E+LA D TGNSRS D+W    T A   P     D P++  E+ +AL     +K+ G DG+P++  KL   ++   SP+AK +  I+N +W  + +P++   S VV IPKKGD+ D NNYRGISL+ T+ KV+  I++ RL     ++ + +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+   +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+L G +  GV + G     +  +SGLLFADD V +A +   L    ++++ W Q+ EM     KCG+M I  STR L      + + G  +  V  Y YLG+VFN K +    + N    G + + +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  I    +  R R  +K  ++KTW++ +++ PFK+R  TW +GT RW  R++    +    +    R  R   S+   W I                +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R + +   I +  + +   N G  Q  ++ LLGG+
Sbjct:  198 LKVMTFNIRGYIGKREEVDLLFQQYQPTILALQETNLNAKSNRLRLQGYQTVESKSHLRAGGRGLAIGVRKGLGLSISEMTQTPHWMAAEITGTSRGKKMTLLIINIHMPHQTNRRKLVIAALTKYLRKLRIKGRKDKIMLAGDFNKNTDSTVALLNRIGIGLRRATVTNSK---GSRMNGATMGRMIDHISFSGLINNPN----YTKVLKSVDLSDHLPVMAEWNIEALDSPTVPRKINVESIKELGESFVSNNRFAALTEPEFNIEDLTSRLTKGIWESAEEVNAIKIEKISNSTVLSKETIKATNKRRKAFKR---LIGDPRTATE----YSDLKEKSIELCRLDRRNNRKAEVRKACDLMLGNKSRDLWSWLKRFSGRFRSSLIDG--PVYNNDH-KLITDTDAKAEVWATHFEKLAKDSTGNSRSADKWKNMGTIAAVFPEC---DAPLSWAEICDALKTTPNNKSPGSDGIPSEVWKLVQNEIEPTSPLAKVISKIINRIWDSENMPKQMDPSVVVPIPKKGDMRDPNNYRGISLIPTLAKVISKIVARRLCAIDNKYEILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKTAGIGSKLYRIIEALYRSPKMCVRVGGKLSKLVEYNCGVRQGCPASPLLFDIYINDLLHGLK--GVEIPGT----EAMISGLLFADDAVVLAESPAELQIALEKISAWSQKWEMQINQEKCGIMGINSSTRML------FTIMGKPVEQVSNYKYLGVVFNDKWNHLSALQNNRENGRKALHSMYFFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDIFTRVSVARERGHKKWVTLKTWISDLISQPFKNRLDTWVSGTVRWKKRFLKGAGNKTTAQALRARKIRNDHSKITEWVIRNNLGLKSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWSSQRSNCIGAFIGDNTSNLNLQNLGV-QPLLSRLLGGE 1240          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1YAQ4_9FUNG (RNA-directed DNA polymerase from mobile element jockey (Fragment) n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1YAQ4_9FUNG)

HSP 1 Score: 432 bits (1110), Expect = 2.340e-130
Identity = 324/1076 (30.11%), Postives = 515/1076 (47.86%), Query Frame = 1
Query:    1 LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHH----RLCLCAVRGRAGKEPLRT------IRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIK-VMELREKDAELGTREHGSKRTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAV-------ADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            LK+ T N+ G  +K+  +   L +     I LQET L A    L I GY+T     +     RGLAI ++  +G     L+     +  +I+  H    +L L  V      + +R       + + LR+LR +  +  I+L+GDFN+        L R    ++  +    K + +     G  R IDH+  +  A+  ++ +   V++ VD+SDH P+++ +  +      P      + + +        +R AV        +     +  + ++ A+     K  +   +  L       I  R K++++  K         +    Y E K+ + +L R+DRR      +  A    +    +  W +    +G  R     G  P+ +     L+T +   +  W  H+E LA D TGNSRS ++W +   +         D P++  E+  AL     +K+ G DG+P++  KL   +    SP AK LL ++N +W  + IP++   S VV IPKKGD+ + NNYRGISL+ T+ KV+  IIS RL +   ++N+ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPH+AL  K+   G+RG +   I  LY + ++ VR GD  S+      GVRQGCP SP+LF+IFIND+L G +  GV + G + E    ++GLLFADD V +A +   L    ++L+ W  + EM     KCG+M I  ST  L      + + G ++  V EY YLG+VFN K +    + +    G +   +M  FL  + IP  MRVA++R V++P L +G E++GM    +  +Q   + A RLVAGVG S A+    L  EL I  I    +  R R   K +S KTW++ ++  PFK+R  TW +GT RW  R++    +    +    R  R   S+   W                  +   A G+  + + R+G F  A  L+    +   Y   CP C  +E +T+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:   20 LKVMTFNIRGYVSKREEIDLFLRQYQPTLITLQETNLNAKSNRLRIQGYQTVESKSQLRAGGRGLAIGVRKELGLSISELSQSPHWMATKISGTHSSGEKLSLIVVNLHMPHQTMRRKLVIWGLTNYLRKLRSKKKKTKILLVGDFNKDIKSTVSMLNRIGIGLRRAVVSNSKGSRMNNATMG--RMIDHVAYTGFANNPNYAK---VLKSVDLSDHLPVIAEWNIESLKIPLPPKRIDTEKMKKQGTRFISDNRFAVLASLEPNTENLVNSVTTSIWETAEELDALKTMKAGYRRVLSNETLETIRKRRKVFKKLSKD-------PSLAIEYSELKEKSIQLSREDRRNNKKAEVNKACDLMLGNKSRELWSWLKRFSGRFRSSLVDG--PIFNKSR-QLVTDSETKAEVWAAHFEELARDSTGNSRSAEKW-RDIGSDSTEVFTECDTPLSWTEIRAALKSTPNNKSPGSDGIPSEAWKLVQDEDEPTSPFAKLLLRLINGIWDAEKIPKQLDPSVVVPIPKKGDMRESNNYRGISLIPTLSKVVSKIISRRLCKIDNKYNILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHQALLRKIKNSGIRGKLYRMIEALYRSPKMCVRVGDRLSKIVEYNCGVRQGCPASPLLFDIFINDLLGGIK--GVKIPGIDTE----IAGLLFADDAVVLADSPAELQIALEKLSAWSHKWEMKINQEKCGIMGINSSTGML------FTVMGKHIEQVTEYKYLGVVFNNKWNNLSALKSNRKNGRKAFHSMYYFLSRKDIPTAMRVALIRTVLIPILCYGGEIFGMSATRSGTLQKVADDATRLVAGVGKSTALQR--LRNELKIDDINTRVSVARERGHTKWASSKTWISELIKQPFKNRLDTWVSGTVRWKRRFLKGAENKTTAQALRARKIRNDHSKITEWVTRNNLGLTSNWMGLELAYPEHARGIRLLAKMRMGAFMTAQSLANSRFISDDYKLKCPFCNGSEADTVEHMLLRCQKWNSQRQNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1064          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A3M2C3P5_9GAMM (Reverse transcriptase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M2C3P5_9GAMM)

HSP 1 Score: 424 bits (1090), Expect = 1.330e-124
Identity = 292/866 (33.72%), Postives = 429/866 (49.54%), Query Frame = 1
Query:  718 ELDRQAVADAAATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAA-----------------YEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKF----------------SSDVAGWKRKDTGS---GLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVK-WTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAG-------DVGTES------PMAKALLGILNLMWKYQIIPEEWQDSTVVSIPK-KGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEH-NLFSHA-QAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFG---LKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSST-PDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSRSRTAA------------------WYIAXXXXXXXXXXXXXXG-HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCME--TEEETLAHVLFDCSRWREGRDSLLHGLI 3081
            E D     D AA R+V T  +VA+   +  L++   +P    S   A    G+    + +TR   A + A +                   Y  T+  A+  VR++ R +W K +Q     +R D K  W++                 S  AG+    +       QP+KHP +  ++T   +I+ +W  ++  LA D TG+      W +  ++ P  P L  L+ P+   E+  ALL +K  KA G DG+ ADFLKL  G       D G ++      PMA  L  +L  MW  + +P  W  + VV I K +GD  +M NYRGISL+  VLK+L  II+ RL    ++  N   H  QAGFR +EEC+     L E+ +RR++ +  ++L F+DLKKAYDTVPH ALF KL+  GVRG  L FI+ LY +S +S R             L+RG+RQGCP+SP+LFN+FINDI+D    LGV V G  + R T + GLLFADDLV ++   ++L Q  D +T W  + EM  G+ KC +M I +    LSS   D+W L G  +P+V EY YLG + +  LD++  +  ++    + + +++PFL CR IP+ +R  V   ++ P  L+GAE++G+R+  T  +      A + +AG           L REL IPP+ A AAARR RA  K  S+KTWV+T+   P + R+ TW TG   W+ R+       IPD  PD+  S++ T                    W+ +                H     G   +I+ R   F  A +LS    +   Y+TLCP C     + E++ H+L +C+ W + R   L  LI
Sbjct:  451 EEDSDLDVDDAAKRLVSTIQRVAQECHI--LKDAGERPPAGKSHTSAASSTGRAAHLSHRTRSLIARKRALFLKLQRIPHGSERWERTMREYLSTRHAAKTAVRKENRVSWLKYVQRGCMAVRGDCKRHWQWIRSLIRSSSSSSCTLPDSHQAGFSSCSSSVIDISRQPIKHPHSKEVLTDPLEIAQAWNLYFGELAEDRTGHQSDTAHWERVGSSIPSLPPLEGLNRPLQWKEVRAALLSMKNGKAPGCDGVSADFLKLCCGQSLEEEDDDGDDAETHPPNPMAAVLFKLLCAMWAQETVPSVWNMAEVVPIFKNRGDQLEMENYRGISLIPVVLKLLCTIITRRLASMIDDQINPRLHKEQAGFRSREECLGHIVALYEVLRRRQIMQLPSYLAFIDLKKAYDTVPHGALFHKLEKIGVRGKCLRFIQNLYRHSSVSFRAPSDCCRNISPAPLRRGLRQGCPMSPLLFNVFINDIIDEIRELGVHVPG--LPRSTTLGGLLFADDLVLLSDHPDKLQQSLDAITHWADKWEMQFGVSKCAIMGIDMPISHLSSLREDQWTLQGQPVPLVEEYVYLGTLLHNSLDMKESIRYRVGRAKKALQSVSPFLSCRSIPLHIRSRVFMSMVCPVALYGAELWGLREDRTRPIHSLFANAIQRIAGTYTGT------LARELRIPPVAALAAARRTRAFFKFPSLKTWVSTLCQHPLRKRKKTWLTGCQYWLRRFR------IPDVGPDSSPSQAATQICQWIWERDRAKDHSHAWDWFHSCHFEHTSSMLFNLASLHIQWTPGFNAMIQMRTRSFLTARKLSIIGKLPSLYMTLCPFCRNEHAQGESIPHLLVECAAWEKWRRIYLQDLI 1300          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X4V9_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=2 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X4V9_9FUNG)

HSP 1 Score: 417 bits (1071), Expect = 1.860e-124
Identity = 319/1073 (29.73%), Postives = 500/1073 (46.60%), Query Frame = 1
Query:   13 TLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARIT-VHH---RLCLCAV------RGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRP---RVIRKVDISDHYPLVSTFRSDRADAATPA---GFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            T N+ G   K+  +  ++ +     +ALQET L A    L + GY+T           RGLAI ++  +G     L      +   ++ VH+   +L L  +      +    K  +  +   LR+LR +  +  IVLMGDFN+        L R    ++  ++       G+R +G   T+  M+  +A+    L  P   +V++ VD+SDH P++S +  +      P           IGE     +     A  D+    +VD+     ++ A+     K    + +  L       I  R KM+++  K    +         Y + K+ A +L R+DRR      ++ A    +    +  W +    +G  R     G  P+   +   L+T +   +  W  H+E LA D TGNSRS ++W               D P++  E+  AL      K+ G DG+P++  K    ++   SP AK L  ++  +W  + IPE+   S VV IPKKGD+ + NNYRGISL+ T+ KV+  II  RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR G   S+      GVRQGCP SP+LF+I+IND+LDG + + +P     +       GLLFADD V +A +   L    ++LT W  + EM     KCGVM I  ST  L      + + G  +  V +Y YLG+VFN K +    + N    G +   +M  FL  + IP  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+    L  EL I  +    +  R R   K ++ KTW++ ++  P K+R  TW +GT RW  R++    +        +R  R   S+   W I                +   A G+  + + R+G F  A  L+    +   Y   CP C  +E +T+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:    2 TFNIRGSIGKREEVDLVMRQYQPTILALQETNLNAKSNRLRLQGYQTIESKSHLRAGGRGLAIGVRKELGISVSELRQTPHWMAGAVSGVHNNGEKLKLFVINLHLPHQTNRRKLAILELTKYLRKLRSKKRKAKIVLMGDFNKDTNSTISMLNRIGIGLRRADVNNSK---GSRMNGV--TMGRMIDHVAY-SGFLNSPNYAKVLKSVDLSDHLPVISEWNIESLKTPVPPKRIDTAKMKEIGESFISNNRFSVLADQDSNTENLVDSVTTSIWETAEELDALKTTPSEYRRVLSNETLETIRKRRKMFKKLAKDPSIEME-------YSDLKEKAIQLCREDRRNNRKAEVKKACDLMLGNKSRELWSWLKRFSGRFRSSLVEG--PIFDKNK-KLVTESEKKAEVWAAHFEELAKDSTGNSRSAEKW-HGMGNDSAGVFTECDTPLSWDEICAALKSTPNKKSPGYDGIPSEAWKTVQHEIEPTSPFAKVLFRLIKEIWDTESIPEQLDASVVVPIPKKGDMREPNNYRGISLIPTLSKVVSKIIVRRLGKIDNKYDILAKEQAGFRSREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLKKIRAGGIGGKVHRIIEALYRSPKMCVRIGGQLSKLVEYNCGVRQGCPASPILFDIYINDLLDGIKGVKIPGIDKGIP------GLLFADDAVVLAESPAELQIALEKLTAWSLKWEMQINQEKCGVMGINSSTGML------FTIMGKTIAQVSDYKYLGVVFNDKWNHLSALQNNRENGRKAFHSMYYFLSRKDIPTAMRAALIRTVLIPILCYGGEIFGMSALRCGTLQKVADDAARLVAGVGRSTALQR--LRNELKIEDVFTRVSVARERGHNKWTTSKTWISDLITQPLKNRLDTWVSGTVRWEKRFLKGSENKTTARALRSRKIRNDNSKITQWVIENNLRLTSNWMGLELAYPEHARGIRLLAKVRMGAFMTAQSLANSRFITEGYKVKCPFCNGSEADTVEHMLLRCQKWNSQRSNCIGAFIGDNTANLNLQNSGV-QPLLSRLLGGE 1042          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1Y7R2_9FUNG (Putative RNA-directed DNA polymerase from transposon BS n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1Y7R2_9FUNG)

HSP 1 Score: 405 bits (1041), Expect = 1.610e-120
Identity = 314/1050 (29.90%), Postives = 499/1050 (47.52%), Query Frame = 1
Query:  130 LNIPGYRTFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHRLCLCAVRGRA-------------GKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRTPYPIKVMELREKDAELGTREHGSK--RTIDHMV-SMMAHPEDHLRRPRVIRKVDISDHYPLVSTFRSD---------RADAATPAGFPVADGIGEGEGDLDELDRQAVADAAATRMVDTA----FQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKTRGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKAFWKFSSDVAGWKRKDTG----SGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQW----VKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDELPDNRLSR---SRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            + + GY+T           RGLAI ++ G+G   +S++ + Q     +     +   + R  A              K  ++ +   LR+L  +  +  I+L+GDFN+        L R    ++   +R      G+R +G++  R IDH+  S  A+  ++ +   V++ VD+SDH P+V+ +  +         R DAA        + +GE           A  D+    +V++     ++ A+     K      +  L       I  R K++++  K    +         Y   K+   +L RQDR       ++ A   M          S ++  W ++ +G    S +          L+T +   +  W +H+E LA D TGNSRS  +W      +TA          D P++  E+  AL     +K+ G DG+P++  K+   +    SP+AK +L ++  +W  + IP++   S V+ IPKKGD+ D NNYRGISL+ T+ KVL  II+ RL +   ++++ +  QAGFR +EECV QA  L E+ +RRK+   +T++ F+D  KAYD VPHEAL  K+   G+ G +   I  LY + ++ VR GD  S+T     GVRQGCP SP+LF+I+IND+LDG + + +P     +E    + GLLFADD V +A +   L    ++LT W Q+ EM     KCG+M I  ST  L      + + G  +  V+EY YLG+VFN K +    + N      +   +M  FL  + +P  MR A++R V++P L +G E++GM       +Q   + A RLVAGVG S A+S   L  E+ I  I   A+  R R   K ++ KTW+  ++N PFK+R  TW +GT RW  R++    +    +    R  R   S+   W I                +   A G+  + + R+G F  A  L+    +   Y   CP C  +E ET+ H+L  C +W   R + +   I +    +   NSG  Q  ++ LLGG+
Sbjct:    1 MRLKGYQTVESKSHLRAGGRGLAISVRKGLG---MSISEILQTPHWMVASVSGIYSNSERMTAFVVNLHMPHHTSRRKLVIKDMTKYLRKLCARNKKAKILLIGDFNKDINSTVALLNRIGIGLRRAVVRNSK---GSRLNGARIGRMIDHIAFSGFANNPNYAK---VLKSVDLSDHLPVVAEWNIESLMSPVLTKRIDAAK------INELGESFTSCSRFAVLADKDSNTENLVNSVTKSIYETAEELDALKTIASDYRTVLSKETLETIRKRRKVFKKLSKDPSVEVE-------YSGLKEKTIQLCRQDRMNNRKVEVKKACDLM------ICNKSRELWSWLKRFSGRFSSSLVDGPIFDKNRQLITDSEAKAEVWASHFEELAKDSTGNSRSAKKWRDIGKNYTA-----EFTECDTPLSWAEICAALKSTPNNKSPGSDGIPSEVWKMVQYEDEPTSPLAKLILRLITGIWDAEKIPKQLDPSVVIPIPKKGDIRDPNNYRGISLIPTLSKVLSKIIARRLCKIDNKYSILAKEQAGFRTREECVAQATTLYEVVRRRKISGLSTWIGFIDFAKAYDRVPHEALLRKIKTAGIGGKLYRVIEALYRSPKMCVRVGDRLSKTVDYNCGVRQGCPASPMLFDIYINDLLDGIKGVKIP----GIEEC--IPGLLFADDAVVLAESPAELQIALEKLTAWSQKWEMQINQDKCGIMGINSSTGML------FTIMGKPITQVKEYKYLGVVFNNKWNNLSALQNNKENERKAFQSMYYFLSRKDVPTAMRAALIRTVLIPILCYGCEIFGMSAVRCSTLQKVADDATRLVAGVGRSTALSR--LRSEMKIDDIFTRASVARERGHNKWTTSKTWITELINKPFKNRLDTWVSGTVRWKKRFLKGAGNNTTAQALRARKIRNDHSKITQWVIKNNLGLTSNWMGLELAYPEQARGIRLLAKVRMGAFMTAQSLANSRFISEDYKLKCPFCNVSEAETVEHMLLRCQKWNSQRSNCIGTFIGDNTANLNLQNSGV-QPLLSRLLGGE 1002          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: L7JX89_TRAHO (RNA-directed DNA polymerase, Non LTR Retrotransposon (Fragment) n=1 Tax=Trachipleistophora hominis TaxID=72359 RepID=L7JX89_TRAHO)

HSP 1 Score: 391 bits (1004), Expect = 3.860e-117
Identity = 242/755 (32.05%), Postives = 385/755 (50.99%), Query Frame = 1
Query:  931 WAAYEETKKTAERLVRQDRRKTWTKALQTA-SAQMRTDPKAFWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYI--------HRLASWIPDELPDNRLSRSRTAAWYIAXXXXXXXXXXXXXXG--HAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKV--ALLLGG 3156
            W ++EE    A++  ++DR++   K L     + ++   K  W +   +A  +R       +PV   D   L+ G  +I  +W++H+E+L+ D  G S+  + W K    P    L   D+PIT  E+  AL    + KA+G DG+P +F K+   D   ESP    +  ++  ++    +PE+W ++ +V +PKKGD+ +M+NYRGISL++T+ K +V II+ +LN     + +    QAGFRK EEC+ Q  C  EI +RR L+ K T  +F+D KKAYD VPHE LFAKL  YG  G +L F+ +LY N + SVR GD  S+TF  + GV+QGCP SP LFN++IN+IL+G   +G+   GN  +    V GLLFADD V  A + + +    + L  W  + +M   I KCG+M    + +R        K   AN+P V  Y YLG+  NR LD++ ++ ++     + +  + P +   +IP+P+RV +++ V++P   FG+E+YGM    T  +Q  ++KA R      A+     +  + E+ I  I   AA  R RA  K  + +T ++ ++ T FK  + TW TGT RW+ R +              + D L   + +RS++                       +  +  G   + + R G F    RL++   +   Y   C  C +   E   H+L+ CS+W + R+    G     D  I +     +Q ++   +LLGG
Sbjct:   93 WLSHEELTDQADKQKKRDRKENKRKYLMRGIKSFLQNRSKIHWNWLKTIARKRRPFV---AKPVIDRDKNELVFGTKEIGEAWRSHFEKLSKDDDGFSKDREYW-KTVIEPAAQTLKGCDDPITWEEVLRALEHSSKGKATGTDGIPIEFYKVLQRDKNRESPFGNFVFQLITEIYAQAKVPEQWNEAMIVPVPKKGDLHNMDNYRGISLINTLCKEVVKIITEKLNRICTTNKILRDEQAGFRKLEECIAQTTCFYEIVKRRSLKGKPTMALFLDFKKAYDKVPHEGLFAKLRGYGFSGRILDFLIELYRNPKASVRIGDERSDTFNYQMGVKQGCPASPTLFNLYINNILEGITGVGI---GNGEQ----VPGLLFADDAVVFAESYDDMVHNMEILEDWCDKWKMDLNISKCGLMVFNSNEQRAI------KYKNANIPTVERYRYLGIPINRNLDLKTVINDRKEKAQQALMIIRPLISRIEIPLPIRVTLIKSVLIPTATFGSELYGMSSQRTAPIQRVIDKAVRCAMACPAN--YCRLTAYEEIRIECIDIRAAKARTRAFIKWRNSRTTISKVMKTDFKCPKTTWYTGTARWIRRLLKNDTLNSTQEGVKKVEDALTTGKYARSKSKIREKRRKLVFGSSISNWKETVKNYRVNRGWHVLTKIRTGTFMFGYRLAKYGRISSEYKKKCIACEKHGREDGIHLLWHCSKWEKEREECYRGFNNSDDQKIRNLFDKNSQDELLEGVLLGG 828          
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Match: A0A1R1X253_9FUNG (RNA-directed DNA polymerase from mobile element jockey n=1 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1X253_9FUNG)

HSP 1 Score: 384 bits (986), Expect = 1.030e-115
Identity = 221/668 (33.08%), Postives = 359/668 (53.74%), Query Frame = 1
Query: 1174 WKTHYERLASDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKASGRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVVSIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQAGFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFAKLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSPVLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNRLAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANLPIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPMRVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAVSNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWTWCTGTHRWMNRYIHRLASWIPDE------LPDNRLSRSRTAAWYIAXXXXXXXXXXXXXXGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMETEEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLLGGK 3159
            W  H+E LA D +GNSR   +W     + Q  +    D  IT  ++ +AL     +KA+G+D +P++F KL   +    + +AK    ++  +W    +PE +  S V+ IPKKGD  D NNY+GISLM +++K++  I S RL E   +HNL    QAGFR +EECV+QA  L E  +RRK++   T++ F+D  KA+D VPH+AL  KL    + G++   I  LY N +I +R G+  SET   + GVRQGCP SP+LF++FINDIL+  + + +P      E +  + GLLFADD V +A +   L    +++++W ++ EM     KCG + IG ST  +      + + G  +P V EY YLG++FN++ +    + N      + ++ M  FL  ++IP+ +R  ++R V+LP   +G E++GM +A  +++Q  ++ A RLV G G +AA++ +    EL I P+    A  R RA  K    +TW++ ++  P K +  TW +GT RW+ R+    +   P E      L   +   +  + W  +                   ++G+  II+ R G +  A +L+R  ++   YL  CP C E + E++ H++F+CS+W   R   +   +   + ++  +   T  Q +  LLGG+
Sbjct:   48 WAKHFEELAKDFSGNSRKSTKWESMGVS-QVMYFEECDNTITWKDITKALKSTPNNKAAGKDRIPSEFWKLVEEESFPTTNLAKLFYKLIKNIWDSAYVPEIFNTSIVIPIPKKGDRRDPNNYKGISLMPSIIKIVTKIASHRLAEMDLKHNLLIKEQAGFRTREECVSQATVLYEAVRRRKIKSLPTWIGFIDFAKAFDRVPHQALLYKLKKLNIGGHLHKVISALYKNPKIQIRFGNALSETVEYECGVRQGCPASPMLFDLFINDILEAIKGVYIP------ELEGNIRGLLFADDAVVLAESPAELQIAFEKISQWSKKWEMKVNASKCGAIGIGQSTNMI------FTVQGGIVPQVEEYKYLGIMFNKRWNHVSAIKNNTDNARKALNGMYYFLARKKIPIALRTIIIRSVLLPIATYGGEIFGMSQARNNKIQSILDTATRLVLGAGKTAAITRIR--EELRITPVNTKTAISRERAYYKWHKSRTWISDLIEFPMKSKLATWVSGTQRWIKRFCSENS---PGETLKALTLRTRKKDSTMISNWIESNNIGRVRNIIGLEMLFPEHSKGIMQIIKIRTGTYNFAYKLARSQVIGREYLMKCPFCNEIKPESVEHLIFECSKWTSERREYMGDFLPNKNNLLPGS---TDTQLLGKLLGGE 694          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1005.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H7_9PHAE0.000e+059.38Reverse transcriptase domain-containing protein n=... [more]
A0A7S1SJ55_9CHLO1.930e-13533.13Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A1R1YP44_9FUNG6.100e-13431.88LINE-1 retrotransposable element ORF2 protein (Fra... [more]
A0A1R1X7T5_9FUNG2.170e-13130.61RNA-directed DNA polymerase from mobile element jo... [more]
A0A1R1YAQ4_9FUNG2.340e-13030.11RNA-directed DNA polymerase from mobile element jo... [more]
A0A3M2C3P5_9GAMM1.330e-12433.72Reverse transcriptase domain-containing protein n=... [more]
A0A1R1X4V9_9FUNG1.860e-12429.73Putative RNA-directed DNA polymerase from transpos... [more]
A0A1R1Y7R2_9FUNG1.610e-12029.90Putative RNA-directed DNA polymerase from transpos... [more]
L7JX89_TRAHO3.860e-11732.05RNA-directed DNA polymerase, Non LTR Retrotranspos... [more]
A0A1R1X253_9FUNG1.030e-11533.08RNA-directed DNA polymerase from mobile element jo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1005contigP-littoralis_Contig1005:11309..14723 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog45157.CMT010CT
PFAMsDUF4283,Exo_endo_phos_2,RVT_1
Model size3159
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons4
Evalue4.48e-79
EggNOG OGsKOG1075@1|root,KOG1075@2759|Eukaryota
DescriptionRibonuclease H protein
Cds size3159
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789345.744341-CDS-P-littoralis_Contig1005:11308..116861680789345.744341-CDS-P-littoralis_Contig1005:11308..11686Pylaiella littoralis U1_48CDSP-littoralis_Contig1005 11309..11686 -
1680789345.7554798-CDS-P-littoralis_Contig1005:11769..138541680789345.7554798-CDS-P-littoralis_Contig1005:11769..13854Pylaiella littoralis U1_48CDSP-littoralis_Contig1005 11770..13854 -
1680789345.7652133-CDS-P-littoralis_Contig1005:14016..144811680789345.7652133-CDS-P-littoralis_Contig1005:14016..14481Pylaiella littoralis U1_48CDSP-littoralis_Contig1005 14017..14481 -
1680789345.7738297-CDS-P-littoralis_Contig1005:14492..147231680789345.7738297-CDS-P-littoralis_Contig1005:14492..14723Pylaiella littoralis U1_48CDSP-littoralis_Contig1005 14493..14723 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1005.3.1prot_P-littoralis_Contig1005.3.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1005 11309..14723 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1005.3.1

>prot_P-littoralis_Contig1005.3.1 ID=prot_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1053bp
LKIGTLNVNGVRNKKTLLRRLLERADLDCIALQETTLTATDWALNIPGYR
TFTVYGERTHSTRGLAILMKNGIGAQTLSLAYLCQVLRARITVHHRLCLC
AVRGRAGKEPLRTIRSQLRRLREQFPQDSIVLMGDFNRVRTEVDRWLRRT
PYPIKVMELREKDAELGTREHGSKRTIDHMVSMMAHPEDHLRRPRVIRKV
DISDHYPLVSTFRSDRADAATPAGFPVADGIGEGEGDLDELDRQAVADAA
ATRMVDTAFQVAKAHRVTKLREPKRKPALKASIARAIDDRGKMYRRARKT
RGDDANRTAAWAAYEETKKTAERLVRQDRRKTWTKALQTASAQMRTDPKA
FWKFSSDVAGWKRKDTGSGLQPVKHPDTGVLMTGAADISASWKTHYERLA
SDVTGNSRSPDQWVKWTAAPQRPHLASLDEPITMPELNEALLRLKRHKAS
GRDGLPADFLKLAAGDVGTESPMAKALLGILNLMWKYQIIPEEWQDSTVV
SIPKKGDVADMNNYRGISLMSTVLKVLVMIISTRLNETFEEHNLFSHAQA
GFRKKEECVTQAACLLEIAQRRKLQRKATFLMFVDLKKAYDTVPHEALFA
KLDFYGVRGNMLGFIRKLYANSRISVRTGDLFSETFGLKRGVRQGCPLSP
VLFNIFINDILDGTETLGVPVSGNNVERKTRVSGLLFADDLVAIASTRNR
LAQLGDRLTKWLQENEMSAGIHKCGVMAIGVSTRRLSSTPDRWKLAGANL
PIVREYTYLGLVFNRKLDVEVMMGNKLAAGARMVSAMAPFLRCRQIPVPM
RVAVVRGVILPRLLFGAEVYGMRKAITHRMQLQMNKAFRLVAGVGASAAV
SNVALWRELDIPPICASAAARRARALQKASSMKTWVATMVNTPFKHRRWT
WCTGTHRWMNRYIHRLASWIPDELPDNRLSRSRTAAWYIASEFADNRLSS
ARTAGHAALAEGLAYIIRCRIGGFWGAGRLSRRDLVHPRYLTLCPCCMET
EEETLAHVLFDCSRWREGRDSLLHGLIAEADTIIGSANSGTAQQKVALLL
GGK
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mRNA from alignment at P-littoralis_Contig1005:11309..14723-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1005.3.1 ID=mRNA_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3415bp|location=Sequence derived from alignment at P-littoralis_Contig1005:11309..14723- (Pylaiella littoralis U1_48)
CTCAAGATTGGCACCCTGAATGTGAACGGTGTAAGGAATAAGAAGACCCT ACTGCGACGTCTGCTTGAAAGGGCGGACCTCGACTGTATTGCGCTGCAGG AGACCACGTTGACCGCGACCGATTGGGCCTTGAACATCCCGGGATACCGG ACGTTCACGGTCTACGGTGAGCGCACCCACTCCACGCGTGGATTGGCCAT ATTGATGAAGAACGGCATCGGGGCACAGACGGTGGGGAAAAGCTCTCCCT GGCATACCTTTGTCAGGTGTTACGGGCTCGCATCACCGTGCATCATCGGC TGTGCCTATGTGCCGTCAGGGGGAGGGCGGGGAAGGAACCGCTGCGGACT ATTCGATCGCAACTACGACGACTACGGGAGCAATTCCCGCAGGACTCCAT TGTGCTCATGGGGGATTTTAACCGGGTCCGTACCGAGGTGGACCGGTGGC TACGCCGAACACCTTACCCGATCAAGGTAATGGAGCTCAGGGAGAAGGAC GCCGAACTGGGAACGCGCGAGCATGGATCCAAGCGGACGATTGACCACAT GGTGTCCATGATGGCGCACCCCGAGGATCACCTCAGGCGTCCTCGGGTGA TCAGGAAGGTGGACATATCCGACCACTACCCGCTGGTCAGCACGTTTAGG AGCGACCGGGCCGATGCGGCCACTCCGGCCGGCTTCCCAGTTGCCGACGG CATAGGTGTCCATGTCACACGCGAGGAGGGCCAGCCCATCAGGATAGAAT GCGCAGCATTACCGATGCCAGGATCGTACTGGTACAGGAAAGGAGGGATC CGGGGGCAGAGGAATCATCAACGCATGGTACACTCTACGTACTGGACTCC CCTCCTAGACCTCCTCGAGGAAGGCGAGGGGGATCTTGATGAGCTGGACC GACAAGCTGTGGCAGATGCCGCGGCAACACGCATGGTGGACACGGCCTTC CAGGTCGCCAAAGCCCACCGCGTTACGAAACTAAGGGAACCCAAGCGGAA GCCGGCTCTCAAAGCCTCAATCGCGCGGGCCATCGACGATCGAGGGAAGA TGTACAGGCGCGCCAGAAAGACCAGGGGAGATGACGCCAATAGGACCGCA GCATGGGCAGCATACGAGGAGACTAAGAAGACCGCCGAACGACTGGTTCG ACAGGACCGCCGCAAAACATGGACGAAAGCGCTCCAAACAGCGAGCGCGC AGATGCGTACTGATCCGAAAGCGTTCTGGAAATTCTCCTCGGATGTCGCT GGGTGGAAACGCAAGGATACAGGCAGCGGACTCCAACCGGTGAAACACCC GGATACAGGTGTGCTGATGACCGGCGCTGCCGACATTAGCGCGTCCTGGA AAACCCACTACGAGCGACTTGCTTCCGACGTTACAGGGAATAGCAGGTCC CCCGACCAATGGGTGAAATGGACCGCCGCGCCTCAGCGCCCCCACCTAGC ATCGTTGGATGAACCAATAACGATGCCCGAATTGAATGAAGCCCTCCTCC GACTTAAGAGACACAAGGCTTCCGGCCGGGACGGATTACCAGCAGATTTT CTGAAACTCGCGGCAGGTGACGTGGGAACCGAGTCACCCATGGCCAAGGC CCTCCTAGGGATACTCAACCTAATGTGGAAATACCAGATTATCCCCGAGG AGTGGCAGGACTCCACGGTGGTCTCGATCCCCAAGAAAGGAGATGTCGCC GACATGAACAACTACCGAGGGATCTCGCTCATGAGCACCGTCCTTAAGGT ACTTGTGATGATTATCAGCACGCGCCTCAACGAGACCTTTGAAGAACACA ACCTGTTCTCGCACGCACAAGCAGGATTTAGGAAGAAAGAGGAATGTGTG ACCCAGGCCGCATGCCTCCTCGAGATCGCGCAACGACGCAAGCTCCAACG CAAGGCGACATTTCTCATGTTCGTCGATCTCAAGAAGGCCTACGACACGG TGCCGCACGAAGCGTTATTCGCCAAACTCGATTTTTACGGTGTGCGCGGG AACATGTTGGGTTTTATCCGCAAGCTGTATGCGAACAGCCGTATCTCTGT CCGGACCGGAGACCTTTTCTCGGAGACTTTTGGCCTGAAACGCGGGGTGA GACAAGGGTGCCCCCTATCACCGGTCCTGTTCAATATATTCATTAATGAT ATCCTGGACGGAACCGAGACACTTGGAGTACCGGTATCGGGAAACAATGT AGAACGCAAAACTCGTGTCTCCGGACTTTTGTTCGCCGATGACCTTGTTG CTATCGCCTCAACCCGGAACCGACTAGCTCAACTCGGGGATCGGCTGACC AAATGGTTGCAGGAGAACGAGATGTCAGCCGGGATTCACAAATGCGGGGT CATGGCCATTGGCGTGAGCACGCGGCGACTCTCCTCGACGCCGGATAGAT GGAAGCTTGCGGGCGCGAACCTGCCCATTGTCCGTGAATATACGTACCTG GGCCTCGTTTTCAACCGCAAGTTAGATGTGGAGGTTATGATGGGGAACAA ACTGGCGGCGGGGGCCCGCATGGTATCGGCAATGGCGCCGTTTCTCCGCT GCCGACAGATCCCCGTGCCGATGAGAGTCGCCGTCGTGCGCGGAGTGATT TTGCCCAGGCTCCTATTTGGTGCGGAGGTGTATGGCATGCGCAAAGCGAT CACCCATAGGATGCAACTGCAGATGAATAAGGCATTTAGATTGGTGGCTG GAGTTGGTGCCTCGGCTGCCGTATCCAATGTCGCCCTGTGGCGGGAGCTG GACATCCCCCCGATTTGCGCTAGCGCCGCAGCACGTCGTGCGCGAGCGCT CCAAAAAGCTAGTTCGATGAAAACTTGGGTTGCCACGATGGTCAATACAC CGTTCAAGCACCGCCGCTGGACTTGGTGCACGGGAACCCACCGTTGGATG AACCGGTACATTCACCGTCTTGCTAGCTGGATTCCGGACGAATTGCCTGA CAACGTCAGACAACCGGGGGATGGCGGGAATTAACCCCAACGATTTTAAG CTCCCACCTCACCACGGCGGTATGGCGACGCGAAGAGAGGCTGTCCCGTT CAAGGACGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTG TCCTCGGCGCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATA CATTATTCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCC GGCGGGATTTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATG GAGACGGAAGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTG GCGGGAGGGTCGGGATAGCCTACTACACGGGCTTATTGCGGAAGCCGACA CGATCATCGGCTCCGCTAACTCAGGAACTGCTCAGCAAAAGGTTGCCCTG CTTCTCGGAGGGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1005:11309..14723-

>mRNA_P-littoralis_Contig1005.3.1 ID=mRNA_P-littoralis_Contig1005.3.1|Name=mRNA_P-littoralis_Contig1005.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3159bp|location=Sequence derived from alignment at P-littoralis_Contig1005:11309..14723- (Pylaiella littoralis U1_48)
CTCAAGATTGGCACCCTGAATGTGAACGGTGTAAGGAATAAGAAGACCCT
ACTGCGACGTCTGCTTGAAAGGGCGGACCTCGACTGTATTGCGCTGCAGG
AGACCACGTTGACCGCGACCGATTGGGCCTTGAACATCCCGGGATACCGG
ACGTTCACGGTCTACGGTGAGCGCACCCACTCCACGCGTGGATTGGCCAT
ATTGATGAAGAACGGCATCGGGGCACAGACGCTCTCCCTGGCATACCTTT
GTCAGGTGTTACGGGCTCGCATCACCGTGCATCATCGGCTGTGCCTATGT
GCCGTCAGGGGGAGGGCGGGGAAGGAACCGCTGCGGACTATTCGATCGCA
ACTACGACGACTACGGGAGCAATTCCCGCAGGACTCCATTGTGCTCATGG
GGGATTTTAACCGGGTCCGTACCGAGGTGGACCGGTGGCTACGCCGAACA
CCTTACCCGATCAAGGTAATGGAGCTCAGGGAGAAGGACGCCGAACTGGG
AACGCGCGAGCATGGATCCAAGCGGACGATTGACCACATGGTGTCCATGA
TGGCGCACCCCGAGGATCACCTCAGGCGTCCTCGGGTGATCAGGAAGGTG
GACATATCCGACCACTACCCGCTGGTCAGCACGTTTAGGAGCGACCGGGC
CGATGCGGCCACTCCGGCCGGCTTCCCAGTTGCCGACGGCATAGGTGAAG
GCGAGGGGGATCTTGATGAGCTGGACCGACAAGCTGTGGCAGATGCCGCG
GCAACACGCATGGTGGACACGGCCTTCCAGGTCGCCAAAGCCCACCGCGT
TACGAAACTAAGGGAACCCAAGCGGAAGCCGGCTCTCAAAGCCTCAATCG
CGCGGGCCATCGACGATCGAGGGAAGATGTACAGGCGCGCCAGAAAGACC
AGGGGAGATGACGCCAATAGGACCGCAGCATGGGCAGCATACGAGGAGAC
TAAGAAGACCGCCGAACGACTGGTTCGACAGGACCGCCGCAAAACATGGA
CGAAAGCGCTCCAAACAGCGAGCGCGCAGATGCGTACTGATCCGAAAGCG
TTCTGGAAATTCTCCTCGGATGTCGCTGGGTGGAAACGCAAGGATACAGG
CAGCGGACTCCAACCGGTGAAACACCCGGATACAGGTGTGCTGATGACCG
GCGCTGCCGACATTAGCGCGTCCTGGAAAACCCACTACGAGCGACTTGCT
TCCGACGTTACAGGGAATAGCAGGTCCCCCGACCAATGGGTGAAATGGAC
CGCCGCGCCTCAGCGCCCCCACCTAGCATCGTTGGATGAACCAATAACGA
TGCCCGAATTGAATGAAGCCCTCCTCCGACTTAAGAGACACAAGGCTTCC
GGCCGGGACGGATTACCAGCAGATTTTCTGAAACTCGCGGCAGGTGACGT
GGGAACCGAGTCACCCATGGCCAAGGCCCTCCTAGGGATACTCAACCTAA
TGTGGAAATACCAGATTATCCCCGAGGAGTGGCAGGACTCCACGGTGGTC
TCGATCCCCAAGAAAGGAGATGTCGCCGACATGAACAACTACCGAGGGAT
CTCGCTCATGAGCACCGTCCTTAAGGTACTTGTGATGATTATCAGCACGC
GCCTCAACGAGACCTTTGAAGAACACAACCTGTTCTCGCACGCACAAGCA
GGATTTAGGAAGAAAGAGGAATGTGTGACCCAGGCCGCATGCCTCCTCGA
GATCGCGCAACGACGCAAGCTCCAACGCAAGGCGACATTTCTCATGTTCG
TCGATCTCAAGAAGGCCTACGACACGGTGCCGCACGAAGCGTTATTCGCC
AAACTCGATTTTTACGGTGTGCGCGGGAACATGTTGGGTTTTATCCGCAA
GCTGTATGCGAACAGCCGTATCTCTGTCCGGACCGGAGACCTTTTCTCGG
AGACTTTTGGCCTGAAACGCGGGGTGAGACAAGGGTGCCCCCTATCACCG
GTCCTGTTCAATATATTCATTAATGATATCCTGGACGGAACCGAGACACT
TGGAGTACCGGTATCGGGAAACAATGTAGAACGCAAAACTCGTGTCTCCG
GACTTTTGTTCGCCGATGACCTTGTTGCTATCGCCTCAACCCGGAACCGA
CTAGCTCAACTCGGGGATCGGCTGACCAAATGGTTGCAGGAGAACGAGAT
GTCAGCCGGGATTCACAAATGCGGGGTCATGGCCATTGGCGTGAGCACGC
GGCGACTCTCCTCGACGCCGGATAGATGGAAGCTTGCGGGCGCGAACCTG
CCCATTGTCCGTGAATATACGTACCTGGGCCTCGTTTTCAACCGCAAGTT
AGATGTGGAGGTTATGATGGGGAACAAACTGGCGGCGGGGGCCCGCATGG
TATCGGCAATGGCGCCGTTTCTCCGCTGCCGACAGATCCCCGTGCCGATG
AGAGTCGCCGTCGTGCGCGGAGTGATTTTGCCCAGGCTCCTATTTGGTGC
GGAGGTGTATGGCATGCGCAAAGCGATCACCCATAGGATGCAACTGCAGA
TGAATAAGGCATTTAGATTGGTGGCTGGAGTTGGTGCCTCGGCTGCCGTA
TCCAATGTCGCCCTGTGGCGGGAGCTGGACATCCCCCCGATTTGCGCTAG
CGCCGCAGCACGTCGTGCGCGAGCGCTCCAAAAAGCTAGTTCGATGAAAA
CTTGGGTTGCCACGATGGTCAATACACCGTTCAAGCACCGCCGCTGGACT
TGGTGCACGGGAACCCACCGTTGGATGAACCGGTACATTCACCGTCTTGC
TAGCTGGATTCCGGACGAATTGCCTGACAACAGGCTGTCCCGTTCAAGGA
CGGCGGCCTGGTACATTGCATCTGAGTTTGCCGACAACCGCCTGTCCTCG
GCGCGGACGGCGGGACACGCTGCGCTTGCTGAAGGCCTCGCATACATTAT
TCGATGCCGCATTGGTGGGTTCTGGGGCGCCGGGCGGCTAAGCCGGCGGG
ATTTGGTTCATCCCCGATACTTAACATTGTGCCCGTGCTGCATGGAGACG
GAAGAAGAGACACTTGCGCACGTACTATTCGATTGCTCCCGGTGGCGGGA
GGGTCGGGATAGCCTACTACACGGGCTTATTGCGGAAGCCGACACGATCA
TCGGCTCCGCTAACTCAGGAACTGCTCAGCAAAAGGTTGCCCTGCTTCTC
GGAGGGAAG
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