mRNA_P-littoralis_Contig137.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: D7G511_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G511_ECTSI) HSP 1 Score: 864 bits (2232), Expect = 5.030e-306 Identity = 461/636 (72.48%), Postives = 516/636 (81.13%), Query Frame = 1
Query: 307 MHLSRTAWRRCAAPGARQASSLRNTAVVNS---RKKQEAPRLSLVGYVCARPASTLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAV-----VQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQA-IARTLVCERRLQRPTSGRAWEAYATVMERDGKMREAFEARKISFEFGIGQGGVGAN 2187
M LS A RR AAPGA +A+S+R + + +S R Q APR + +R ASTLPDVCGLPVVT+SW+AIKSLD+AYTEYANLSGDP+ RTQEAL+HD SCVMA+C RGLLAAL QSDP VAGCLAAAE L+ + D+G G A +EGERER FAATLRAW GRWREGAL+LETWLMS P DLPA+KL+Q+AHL +GDSANMRDCVGRVLPFWS+ATFGYGNV+GMHAFGLVENGAYALAEE+AD+ALAIQ TDIWAVHAMAHV+EMEARASEGCSFLT+CRD+WED +GPLQQH+AWHLGLFSLERGQEA A RVFDTLL+P RE G LDGAL+LPPPAPFALTDA SLLWRMDLLG ETGA RWRGVAEAWLQ++ ARHLSTFHDLHA+MAFAAMANGV+DD EAE W SRT++LL SM EYV+SGG XXXXXXXXX A V+LH+FP NRG GG DEG PPDNLWVAEH+G+ LC AM AYRGGEF++AVS LLPLRYHL IGGS+AQQDV HLTL+DAALRLP++A +ARTLVCERRLQRPTSGRAWEA+ATVMERDG MR+AFEARK+SFEFGIGQGGVGAN
Sbjct: 1 MLLSGVARRRFAAPGALRAASVRRSVLGSSNSTRGCQAAPRSA------SRLASTLPDVCGLPVVTTSWQAIKSLDDAYTEYANLSGDPFLRTQEALEHDSSCVMAHCFRGLLAALSQSDPDAVAGCLAAAERGLQLQGIDVGDGDDAARA-----KEGERERVFAATLRAWCGGRWREGALHLETWLMSAPVDLPALKLSQDAHLTLGDSANMRDCVGRVLPFWSDATFGYGNVLGMHAFGLVENGAYALAEERADMALAIQRTDIWAVHAMAHVFEMEARASEGCSFLTECRDKWEDTEGPLQQHMAWHLGLFSLERGQEARATRVFDTLLAPPREGGTLDGALLLPPPAPFALTDASSLLWRMDLLGVETGASRWRGVAEAWLQYQHARHLSTFHDLHALMAFAAMANGVEDDAEAEYWESRTRELLESMGEYVKSGGEAPAAXXXXXXXXXPAGGSEPTPASTAATPTAAPVELHAFPVSRNRG-----VGGDADEG-----GVEGPPDNLWVAEHVGLPLCRAMAAYRGGEFDEAVSLLLPLRYHLDAIGGSKAQQDVVHLTLLDAALRLPEKATVARTLVCERRLQRPTSGRAWEAFATVMERDGDMRQAFEARKLSFEFGIGQGGVGAN 615
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: UPI00145FC157 (tetratricopeptide repeat protein n=1 Tax=Aromatoleum diolicum TaxID=75796 RepID=UPI00145FC157) HSP 1 Score: 213 bits (543), Expect = 4.950e-57 Identity = 180/573 (31.41%), Postives = 248/573 (43.28%), Query Frame = 1
Query: 460 TLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLR-GLLAALGQSD-PATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETW---LMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQAIARTLVCERRLQRPTSG-------RAWEAYATVMERDGKMREAFEARK 2142
TL D G+ V +S A++ L+ A + GDP +AL DP VM YC R G+LA A + G + A E L +RA ERER A RAW G + +E W L+ VP D A++ A +G S+ +RD V RVLP W E GYG V+GMHAFGL E Y AE A A+ + D WA+HA AHV EM+ R ++G +LT+ +D W D H WHL L+ L+ G + ++D + PR + L+ + DA +LLWR+ L G +TG RW +A+AW + + + F+D HA+MAF A DE A Q LL ++ +GG N ++ +G+ LC A+ A+ G+ +AV L +R GGS AQ+D+ HLTLV+AALR +AR+LV ER Q+PTS RA A A E G A +AR+
Sbjct: 2 TLLDRRGVSVSATSHAALERLETATDLFNGYFGDPIAAIDKALAEDPQFVMGYCFRAGVLATCTDKTLEAELRGSVEAGEA-LWRRA-------------------NERERGHIAAARAWLDG---DIPAAVERWSAVLLEVPRDSLALQFAHLGDFYLGQSSMLRDRVARVLPDWDEGVAGYGYVLGMHAFGLEETALYDQAEHTARRAVELNRRDPWAIHAGAHVMEMQGRQADGIRWLTERQDDWAI-DNAFAFHNWWHLALYHLDLGDTGRVLELYDRAIRPRPSNVVLE------------MIDASALLWRLYLRGVDTGT-RWHELAQAWAPTVEHGYYA-FNDFHAMMAFVASG-----DERA------AQTLLATLERRAAAGGT------------------------------------------------------------------NGMMSREVGLPLCRALEAFGRGDHGRAVDLLQSVRCVAQRFGGSHAQRDIIHLTLVEAALRAGQGRLARSLVAERSAQKPTSPFNRALAIRAERAAAASREAGGHGLRAPDARQ 459
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: A0A7X7PWE4_9GAMM (Tetratricopeptide repeat protein n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7X7PWE4_9GAMM) HSP 1 Score: 201 bits (511), Expect = 1.400e-52 Identity = 170/580 (29.31%), Postives = 249/580 (42.93%), Query Frame = 1
Query: 460 TLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYATVME------RDGKMREAFEARKISFEFGIGQGGVG 2181
+L D G+PV T + + ++ ++A DP QE L+ D A+CLR L L +D +V L + +E LG R ERER AA RAW G + L P DL A++ A ++G+S +RD + +VLP W E+ GY V+GM+AFGL E GAY+ AE+ AL + D WAVHA+AHV EM+ R EG FL + W ++ H WHL LF L+ G + ++D + R S + AP + DA +LLWR+ + G + G ERWR +A+AW Q F+D+HA+MAFA H G R +I + E + + N + +G+ + +A++++ G + + + LLP+R GGS AQ+D+ HLTLV+AALR +AR LV ER + S W+ A V + R + RE+ E R+ + G+G GVG
Sbjct: 2 SLVDCRGVPVSTRNVRCLQQYEQAVELAVGYYLDPLAILQEILEDDAQFAAAHCLRAALM-LTATDK-SVLPMLRESVEAIES----LGR------------RAHERERAHAAAARAWLQGDFAGSIRSYGDILHDYPHDLVALQTAHIGDFLLGESTMLRDRIAQVLPQWDESIPGYSYVLGMYAFGLEETGAYSRAEDIGRRALELNGRDPWAVHAVAHVMEMQGRLREGIDFLGAHENAWA-RNNAFAFHNWWHLALFYLDIGDTGQVLALYDAKV--RTASSQ----------APLEMIDASALLWRLHIRGVDVG-ERWRALADAW-QPAAEDAFYAFNDVHAIMAFAG----------------------------------------------------------------AHRL--GLARKTIAAM-----------ERQAAGTHTNALMTREVGLPVAQAVISFALGHYAECIESLLPIRTIAHRFGGSHAQRDLIHLTLVEAALRAGKIKLARALVAERTQLKAASPFNWQLSARVSDAIGEADRAARARESAETRRRAHFAGLGAWGVG 471
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: A0A7V3XKZ6_9BACT (Tetratricopeptide repeat protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XKZ6_9BACT) HSP 1 Score: 197 bits (502), Expect = 1.910e-51 Identity = 172/556 (30.94%), Postives = 233/556 (41.91%), Query Frame = 1
Query: 448 RPASTLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQ----SDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMV---GDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQH-EQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYA 2091
R + D GLPV A+ ++A EY + GDP +EAL P V+ + R + ++ A V+ +A+AE L GAN ERER A R G W + L+ P D A+ Q AHLM GD+ N+R+ + RVLP W+ + GY ++GMHAFGL E Y AEE A AL ++ D WAVHA+AHV EM+ R EG +LT W +G H WHL LF L+R + A A+ ++DT + P PP L DA +LLWR+ L G + G R VA+ W + R F+DLHA+MAF EAE R LL + + GG + N +A +G+ LC A+ A+ +E A+ L P+R GGS AQ+DV LTL++AALR A+AR + ER + RP SG W A
Sbjct: 16 RARGSAKDARGLPVSCGDRAALDLHEKALREYQSYVGDPIATIEEALRLAPDFVLGHVFRATVLMTSTERRLAEQARVS--VASAEALLS----------GAN----------ERERGLAGAARRLVDGDWDGACAAFDRVLVDHPRDAFAI---QSAHLMDFFRGDALNLRNRISRVLPHWNASVPGYSYILGMHAFGLEECNQYPQAEETARRALDLERRDGWAVHAVAHVMEMQGRVDEGVEWLTSREADWAPDNG-FAFHNYWHLALFHLDRQRHADALALYDTRVHPA------------PPEFALQLLDATALLWRLHLDGVDLGG-RAGVVADNWAARLDTERGFYAFNDLHAMMAFTMAGR------EAEAAR-----LLADLEWSIEHGGRS-----------------------------------------------------------------NRMMAREVGLPLCRAIRAFGRQRWEDAIVDLEPVRDVAWRFGGSHAQRDVLTLTLIEAALRSGQPALARHYIAERTVHRPASGWGWRLLA 456
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: A0A3L7AKQ8_9HYPH (Tetratricopeptide repeat protein n=1 Tax=Xanthobacter tagetidis TaxID=60216 RepID=A0A3L7AKQ8_9HYPH) HSP 1 Score: 196 bits (499), Expect = 4.670e-51 Identity = 170/561 (30.30%), Postives = 233/561 (41.53%), Query Frame = 1
Query: 469 DVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQAR---HLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYATVMERDGKMREAFEARK 2142
DV GL V T+S KA+ LD A +Y N + AL DPSCV+A C RG L L + V L ELE+ D+ ERER + L+AW G L E L P DL A+KL G + +R V L W EAT GY +V GM+A+ L E GAYA AE A+ D+WA+H++AHV EM+ R EG +L RD W +K+ + HV WH GLF + A+RVFD LS +D +++ + L R+ + G + G RW +AE H R H+ F D H +A AA + RE ++S ++F+ DGE+ N + + + LCEAM+AY GG+ KA L P+R L IGGS AQ+D+ L+DAA+R +AR L+ ER P R W Y V+ G++ A +A +
Sbjct: 4 DVRGLDVTTTSPKAVAHLDLAVADYLNYGTSASAEVKAALAEDPSCVLAQCYRGYL--LMMLENPAVFPKLRQTLAELEQAGGDIT----------------ERERLHLSALKAWVKGDLMNACLAWEQVLNQWPQDLMALKLHHTMAFYTGRNNVLRAVVAGALGAWDEATPGYSHVQGMYAYALEECGAYADAERWGRAAVEGNPEDLWAIHSVAHVMEMQGRFDEGADWLDYSRDDWANKNF-FKAHVWWHRGLFHIVAENYDRALRVFDEDLSSLNSETYID------------VSNQAAFLKRLQIAGVDVG-NRWDLLAE----HSATRIHDHILPFRDAHFCLALAAKGR------------------FDTAREQIQSM-------------------------------------------AVFAK---------DGESW------NARTTQAVLIPLCEAMIAYEGGDHAKACDILWPMRNELAPIGGSLAQRDLFAQILIDAAVRAGRLPMARNLLSERVALFPRGRRGWREYGKVLADLGELDLAAKAHR 452
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: A0A841HP54_9GAMM (Tetratricopeptide (TPR) repeat protein n=1 Tax=Povalibacter uvarum TaxID=732238 RepID=A0A841HP54_9GAMM) HSP 1 Score: 196 bits (499), Expect = 4.780e-51 Identity = 156/551 (28.31%), Postives = 233/551 (42.29%), Query Frame = 1
Query: 463 LPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREG-ERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPDQAIARTLVCERRLQRPTSGRAWEAYATVMERDG 2112
L D G+ V T S A+ ++A A DP + A+D DP M +CL+ L + +DP V ++ E + VGR ERER AA R W G + L+ P DL A+++A ++G S+ +RD V VLP W GYG V+GMHAFGL E GAY+ AE+ AL + D WAVHA+AHV EM R +G +LT W ++G H WHL L+ L+ G A ++++D + P P + DA +LLWR+ L G + G+ RW+ +A +W + + F+D+HAVM+F ++ DL+ + L E K N ++ +G+ + +A++A+ G + V LLP+R GGS AQ+D+ H TLV+AALR + +++R L ER +PTS W+ A ++ G
Sbjct: 3 LTDCRGVSVSTHSRDALHHYEQAVELSAGYYADPMTTIRVAIDTDPDFAMGHCLQAALI-VTSTDPTLVPMLRSSIEAV------------------EAVGRRANERERAHAAAARKWLHGDFAGSIRAYGDILLDYPRDLLALQVAHVGDFLLGHSSMLRDRVAHVLPHWDSTVPGYGYVLGMHAFGLEECGAYSQAEDTGRRALDLNPRDPWAVHAVAHVMEMTGRVRDGIDWLTRRERDWAPENG-FAFHNWWHLALYHLDTGDVPAVLQLYDRKVRPVASQ------------VPLEMIDASALLWRLHLRGVDVGS-RWQALAASWAPLIDHGYYA-FNDVHAVMSFIG---------------AQRLDLVAR------------------------------------TIATL--------------------------ERKALGNDTNAMMSRDVGLPMAQALLAFGAGYYNDVVELLLPVRTIANRFGGSNAQRDIVHQTLVEAALRAGNASLSRALASERTHLKPTSPFNWQLTARALDLAG 442
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: A0A5J6MR69_9PROT (Tetratricopeptide repeat protein 38 family protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6MR69_9PROT) HSP 1 Score: 192 bits (489), Expect = 1.030e-49 Identity = 130/372 (34.95%), Postives = 184/372 (49.46%), Query Frame = 1
Query: 463 LPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGL--LAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSR 1572
L D G P T + A+++ + A LSGDP + A+ +P V+ + + L L + ++ G LA AE L R R RAWS+G W++ E L+ P DL AVK+ Q+ + +GD+AN+RD V RVLP WSEA GY ++GM +FGL ENG Y AE A+A + D WA HA+AHV EM+ R +G +FL+ W + H WHL L+ L++G AA+ ++D G L G + P L DA SLLWR+ L+G E G RW+ +A+ WL H + + F+D HA+MAF G +D +AE R+R
Sbjct: 3 LTDRWGEPTDTDNRAALEAYERAVQGMVALSGDPLAEIRGAVAIEPGFVLGHLVEALFHLYPMTRAQSQEALGSLARAEAALRPTTP-------------------ARLRGHLHAARAWSSGHWQDATAAWEAVLLDHPHDLLAVKVLQDLYFFLGDAANIRDTVARVLPNWSEAEPGYSYLLGMLSFGLEENGDYQQAERMGRGAIARDAYDPWAHHAIAHVLEMQGRVGDGIAFLSGGAPYWAQSFFAV--HNWWHLALYELDQGDGNAALDLYD---------GPLRGGVS---DQPLDLVDASSLLWRLKLVGFEAGQRRWQALAKLWLPHAEDM-VYCFNDAHAMMAFV----GAGEDRQAEALRAR 336
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: UPI001AE76FFC (tetratricopeptide repeat protein n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE76FFC) HSP 1 Score: 186 bits (473), Expect = 1.550e-47 Identity = 129/369 (34.96%), Postives = 179/369 (48.51%), Query Frame = 1
Query: 460 TLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLR-GLLAALGQSDPATVAGCLAAAETELEKRA-ADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAEL 1560
TL D GL V T S A+ D A D EAL+ DP VM +C + G+ A + AA + +L + A AGAN +RER A RAW G A + P D+ A+++ + +G+S +RD V +VLP W E G+G+V+GMHAFGL +N Y AEE ALA+ D WA+HA+AHV EM+ R SEG +L + QW D + H WHL L+ LERG+ + ++D + P S L+ L DA ++LWR+ L G + G +RWR VA++W + A F+D HA+MAF + +G DD E L
Sbjct: 2 TLHDTRGLAVSTRSQSALDRFDAAVELLNGYYLDFIAVIDEALEEDPGFVMGHCFKAGVYATCNE----------AAVQPDLRRSVEAAEALSAGAN----------DRERAHMAAARAWMEGDLERAAALYGRIVQEHPRDILALQIGHQTDFFLGESRMLRDRVAQVLPHWDEGVPGFGHVLGMHAFGLEQNNLYDRAEEAGRRALALNQRDPWAIHAVAHVMEMQGRVSEGVEWLESRKAQWADNNA-FSFHNWWHLALYHLERGETDRVLALYDAQVRPNPASMALE------------LVDASAMLWRLHLRGVDVG-DRWRNVADSW-ERTAADGYYAFNDAHAMMAF--VGDGRDDAAERAL 333
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: TTC38_XENLA (Tetratricopeptide repeat protein 38 n=2 Tax=Xenopus laevis TaxID=8355 RepID=TTC38_XENLA) HSP 1 Score: 185 bits (470), Expect = 4.350e-47 Identity = 133/447 (29.75%), Postives = 210/447 (46.98%), Query Frame = 1
Query: 775 ERERFFAATLRAWSAGRWREGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRR-ESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAFAAMANGVDDDEEAELWRSRTQDLLRSMREYVRSGGVTXXXXXXXXXXXXXXXXXXXXXXXXXAVVQLHSFPNGPNRGSIFSSAGGFEDEGPDGEAKGSSPPDNLWVAEHIGVALCEAMVAYRGGEFEKAVSGLLPLRYHLGTIGGSRAQQDVAHLTLVDAALRLPD---QAIARTLVCERRLQRPTSG------RAWEA 2085
ERE+ A + ++ G + A E L S PTDL A+K A + + +G+ MRD V RVLP+W T V GM++FGL+E Y A + A ALA++ TD W+VH +AHV+EM+A G SF+ + + W+ D L HV WH L+ +E+G AA+ ++D ++P+ SG + + D S+L+R+ + G G +RW+ + + +H + H+ F+DLH +M+ + G D++ T+ L+ SM+E +S G Q HS + +H+G LC+A++ Y GG ++KAV + P+RY + IGGS AQ+D+ + L+ AA+ Q +AR L+ ER + RP S + WEA
Sbjct: 106 EREKLHVAAVETFADGNLPKAADLWERILQSHPTDLLALKFAHDCYFYLGEQRQMRDSVARVLPYWKPETPLSSYVKGMYSFGLLETNFYDQALKVAKEALAVERTDSWSVHTIAHVHEMKADLDSGLSFMQETENNWKGSD-MLACHVYWHWALYLIEKGDYEAALTLYDNHIAPQCFASGSM-----------LDVVDNSSMLYRLQMEGVNVG-DRWKNLVQITKKHTK-DHMLIFNDLHFLMS----SLGSKDEDT-------TRQLVESMQELSKSPGEK----------------------------QQHS------------------------------------LIKHLGAPLCQALIEYNGGNYDKAVDLIYPIRYQILKIGGSDAQRDLFNQVLIQAAINSDSTHHQNLARVLLMERDIGRPNSPLTQRLIKKWEA 463
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Match: UPI00192A953F (tetratricopeptide repeat protein n=3 Tax=Skermanella TaxID=204447 RepID=UPI00192A953F) HSP 1 Score: 185 bits (469), Expect = 4.790e-47 Identity = 128/353 (36.26%), Postives = 175/353 (49.58%), Query Frame = 1
Query: 460 TLPDVCGLPVVTSSWKAIKSLDEAYTEYANLSGDPYKRTQEALDHDPSCVMAYCLRGLLAALGQSDPATVAGCLAAAETELEKRAADLGHGAGANEGNKGVGREGERERFFAATLRAWSAGRW-REGALYLETWLMSVPTDLPAVKLAQEAHLMVGDSANMRDCVGRVLPFWSEATFGYGNVVGMHAFGLVENGAYALAEEKADVALAIQSTDIWAVHAMAHVYEMEARASEGCSFLTDCRDQWEDKDGPLQQHVAWHLGLFSLERGQEAAAIRVFDTLLSPRRESGKLDGALVLPPPAPFALTDACSLLWRMDLLGAETGAERWRGVAEAWLQHEQARHLSTFHDLHAVMAF 1515
+L D+ G PV S +++ + A DP EAL+ +P VM +CLRG L + +AE EL + AG+ G RER A LR+W G + R G LY E L+ P DL A+++A + VG++A +RD RVLP W AT GYG V+GMHAFGL EN + AEE A+ + D WA+HA+AHV EME R +G ++T D W D L H WHL L+ L+ GQ + ++D + PR P A L DA S+LWRM L G + G +RW VA + + + F+D+HA+MAF
Sbjct: 2 SLKDLRGEPVSASDRRSLDRFEHALGLLNGYFADPLAAIDEALEENPGFVMGHCLRGALMLMAAEK---------SAEPELRRSVEAAEALAGSANG---------RERGHVAALRSWLDGDFHRAGELYGEV-LLEHPRDLLALQVAHQVDFFVGNTALLRDRPARVLPQWDAATPGYGYVLGMHAFGLEENNMFRRAEEAGRHAVELTPRDPWAIHAVAHVMEMEGRLGDGIRWMTKRVDDWAP-DNMLAVHNWWHLALYHLDHGQPDRTLAIYDEHIRPR------------PGGAAIELVDATSMLWRMHLRGIDVG-DRWEPVAXXXXXXAEDGYYA-FNDMHAMMAF 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig137.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig137.78.1 >prot_P-littoralis_Contig137.78.1 ID=prot_P-littoralis_Contig137.78.1|Name=mRNA_P-littoralis_Contig137.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=628bp MHLSRTAWRRCAAPGARQASSLRNTAVVNSRKKQEAPRLSLVGYVCARPAback to top mRNA from alignment at P-littoralis_Contig137:404428..415434+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig137.78.1 ID=mRNA_P-littoralis_Contig137.78.1|Name=mRNA_P-littoralis_Contig137.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11007bp|location=Sequence derived from alignment at P-littoralis_Contig137:404428..415434+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig137:404428..415434+ >mRNA_P-littoralis_Contig137.78.1 ID=mRNA_P-littoralis_Contig137.78.1|Name=mRNA_P-littoralis_Contig137.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1884bp|location=Sequence derived from alignment at P-littoralis_Contig137:404428..415434+ (Pylaiella littoralis U1_48)back to top |